Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0721:0722
Extra
PDB:
ATOM 1 O3' U A 720 67.514 60.467 51.365 1.00 72.33 O
ATOM 2 P U A 721 68.248 59.114 50.932 1.00 77.27 P
ATOM 3 OP1 U A 721 69.713 59.279 51.103 1.00 77.45 O
ATOM 4 OP2 U A 721 67.705 58.714 49.609 1.00 77.15 O
ATOM 5 O5' U A 721 67.739 58.068 52.013 1.00 81.16 O
ATOM 6 C5' U A 721 67.904 56.670 51.791 1.00 87.29 C
ATOM 7 C4' U A 721 66.777 55.900 52.429 1.00 90.65 C
ATOM 8 O4' U A 721 65.506 56.541 52.139 1.00 91.00 O
ATOM 9 C3' U A 721 66.638 54.500 51.865 1.00 92.79 C
ATOM 10 O3' U A 721 67.571 53.608 52.461 1.00 95.95 O
ATOM 11 C2' U A 721 65.172 54.186 52.120 1.00 92.07 C
ATOM 12 O2' U A 721 64.918 53.810 53.456 1.00 90.88 O
ATOM 13 C1' U A 721 64.530 55.551 51.844 1.00 91.92 C
ATOM 14 N1 U A 721 64.096 55.741 50.449 1.00 91.95 N
ATOM 15 C2 U A 721 62.786 55.430 50.129 1.00 92.65 C
ATOM 16 O2 U A 721 61.985 54.991 50.944 1.00 94.30 O
ATOM 17 N3 U A 721 62.445 55.651 48.815 1.00 91.75 N
ATOM 18 C4 U A 721 63.257 56.137 47.815 1.00 90.58 C
ATOM 19 O4 U A 721 62.797 56.290 46.684 1.00 91.06 O
ATOM 20 C5 U A 721 64.595 56.420 48.219 1.00 90.55 C
ATOM 21 C6 U A 721 64.961 56.219 49.486 1.00 91.09 C
ATOM 22 P C A 722 68.801 53.046 51.585 1.00 99.33 P
ATOM 23 OP1 C A 722 70.012 53.043 52.450 1.00 98.40 O
ATOM 24 OP2 C A 722 68.831 53.780 50.286 1.00 98.56 O
ATOM 25 O5' C A 722 68.383 51.533 51.301 1.00101.55 O
TER
ATOM 1 O3' U B 721 67.571 53.608 52.461 1.00 95.95 O
ATOM 2 P C B 722 68.801 53.046 51.585 1.00 99.33 P
ATOM 3 OP1 C B 722 70.012 53.043 52.450 1.00 98.40 O
ATOM 4 OP2 C B 722 68.831 53.780 50.286 1.00 98.56 O
ATOM 5 O5' C B 722 68.383 51.533 51.301 1.00101.55 O
ATOM 6 C5' C B 722 68.528 50.942 49.993 1.00104.64 C
ATOM 7 C4' C B 722 68.441 49.436 50.093 1.00106.56 C
ATOM 8 O4' C B 722 69.572 48.942 50.855 1.00107.39 O
ATOM 9 C3' C B 722 67.218 48.907 50.829 1.00107.47 C
ATOM 10 O3' C B 722 66.103 48.793 49.947 1.00107.94 O
ATOM 11 C2' C B 722 67.692 47.547 51.331 1.00108.38 C
ATOM 12 O2' C B 722 67.610 46.529 50.351 1.00108.35 O
ATOM 13 C1' C B 722 69.167 47.832 51.641 1.00109.01 C
ATOM 14 N1 C B 722 69.476 48.118 53.057 1.00110.05 N
ATOM 15 C2 C B 722 69.736 47.043 53.933 1.00110.75 C
ATOM 16 O2 C B 722 69.668 45.874 53.502 1.00111.33 O
ATOM 17 N3 C B 722 70.052 47.307 55.223 1.00110.99 N
ATOM 18 C4 C B 722 70.110 48.572 55.653 1.00110.70 C
ATOM 19 N4 C B 722 70.439 48.785 56.930 1.00110.14 N
ATOM 20 C5 C B 722 69.837 49.676 54.792 1.00110.48 C
ATOM 21 C6 C B 722 69.526 49.407 53.518 1.00110.09 C
ATOM 22 P A B 723 64.726 49.547 50.291 1.00108.04 P
ATOM 23 OP1 A B 723 63.721 49.106 49.291 1.00108.36 O
ATOM 24 OP2 A B 723 65.014 50.998 50.452 1.00107.89 O
ATOM 25 O5' A B 723 64.302 48.953 51.707 1.00107.97 O
TER
ATOM 2 P U A 721 68.248 59.114 50.932 1.00 77.27 P
ATOM 3 OP1 U A 721 69.713 59.279 51.103 1.00 77.45 O
ATOM 4 OP2 U A 721 67.705 58.714 49.609 1.00 77.15 O
ATOM 5 O5' U A 721 67.739 58.068 52.013 1.00 81.16 O
ATOM 6 C5' U A 721 67.904 56.670 51.791 1.00 87.29 C
ATOM 7 C4' U A 721 66.777 55.900 52.429 1.00 90.65 C
ATOM 8 O4' U A 721 65.506 56.541 52.139 1.00 91.00 O
ATOM 9 C3' U A 721 66.638 54.500 51.865 1.00 92.79 C
ATOM 10 O3' U A 721 67.571 53.608 52.461 1.00 95.95 O
ATOM 11 C2' U A 721 65.172 54.186 52.120 1.00 92.07 C
ATOM 12 O2' U A 721 64.918 53.810 53.456 1.00 90.88 O
ATOM 13 C1' U A 721 64.530 55.551 51.844 1.00 91.92 C
ATOM 14 N1 U A 721 64.096 55.741 50.449 1.00 91.95 N
ATOM 15 C2 U A 721 62.786 55.430 50.129 1.00 92.65 C
ATOM 16 O2 U A 721 61.985 54.991 50.944 1.00 94.30 O
ATOM 17 N3 U A 721 62.445 55.651 48.815 1.00 91.75 N
ATOM 18 C4 U A 721 63.257 56.137 47.815 1.00 90.58 C
ATOM 19 O4 U A 721 62.797 56.290 46.684 1.00 91.06 O
ATOM 20 C5 U A 721 64.595 56.420 48.219 1.00 90.55 C
ATOM 21 C6 U A 721 64.961 56.219 49.486 1.00 91.09 C
ATOM 22 P C A 722 68.801 53.046 51.585 1.00 99.33 P
ATOM 23 OP1 C A 722 70.012 53.043 52.450 1.00 98.40 O
ATOM 24 OP2 C A 722 68.831 53.780 50.286 1.00 98.56 O
ATOM 25 O5' C A 722 68.383 51.533 51.301 1.00101.55 O
TER
ATOM 1 O3' U B 721 67.571 53.608 52.461 1.00 95.95 O
ATOM 2 P C B 722 68.801 53.046 51.585 1.00 99.33 P
ATOM 3 OP1 C B 722 70.012 53.043 52.450 1.00 98.40 O
ATOM 4 OP2 C B 722 68.831 53.780 50.286 1.00 98.56 O
ATOM 5 O5' C B 722 68.383 51.533 51.301 1.00101.55 O
ATOM 6 C5' C B 722 68.528 50.942 49.993 1.00104.64 C
ATOM 7 C4' C B 722 68.441 49.436 50.093 1.00106.56 C
ATOM 8 O4' C B 722 69.572 48.942 50.855 1.00107.39 O
ATOM 9 C3' C B 722 67.218 48.907 50.829 1.00107.47 C
ATOM 10 O3' C B 722 66.103 48.793 49.947 1.00107.94 O
ATOM 11 C2' C B 722 67.692 47.547 51.331 1.00108.38 C
ATOM 12 O2' C B 722 67.610 46.529 50.351 1.00108.35 O
ATOM 13 C1' C B 722 69.167 47.832 51.641 1.00109.01 C
ATOM 14 N1 C B 722 69.476 48.118 53.057 1.00110.05 N
ATOM 15 C2 C B 722 69.736 47.043 53.933 1.00110.75 C
ATOM 16 O2 C B 722 69.668 45.874 53.502 1.00111.33 O
ATOM 17 N3 C B 722 70.052 47.307 55.223 1.00110.99 N
ATOM 18 C4 C B 722 70.110 48.572 55.653 1.00110.70 C
ATOM 19 N4 C B 722 70.439 48.785 56.930 1.00110.14 N
ATOM 20 C5 C B 722 69.837 49.676 54.792 1.00110.48 C
ATOM 21 C6 C B 722 69.526 49.407 53.518 1.00110.09 C
ATOM 22 P A B 723 64.726 49.547 50.291 1.00108.04 P
ATOM 23 OP1 A B 723 63.721 49.106 49.291 1.00108.36 O
ATOM 24 OP2 A B 723 65.014 50.998 50.452 1.00107.89 O
ATOM 25 O5' A B 723 64.302 48.953 51.707 1.00107.97 O
TER
Atoms:
C4: (63.257,56.137,47.815)
N3: (62.445,55.651,48.815)
OP1: (69.713,59.279,51.103)
OP2: (67.705,58.714,49.609)
C2: (62.786,55.430,50.129)
C1': (64.530,55.551,51.844)
C3': (66.638,54.500,51.865)
O5': (67.739,58.068,52.013)
O4': (65.506,56.541,52.139)
C5': (67.904,56.670,51.791)
P: (68.248,59.114,50.932)
C4': (66.777,55.900,52.429)
C2': (65.172,54.186,52.120)
O2': (64.918,53.810,53.456)
N1: (64.096,55.741,50.449)
O4: (62.797,56.290,46.684)
O2: (61.985,54.991,50.944)
C6: (64.961,56.219,49.486)
C5: (64.595,56.420,48.219)
O3': (67.571,53.608,52.461)
N3: (62.445,55.651,48.815)
OP1: (69.713,59.279,51.103)
OP2: (67.705,58.714,49.609)
C2: (62.786,55.430,50.129)
C1': (64.530,55.551,51.844)
C3': (66.638,54.500,51.865)
O5': (67.739,58.068,52.013)
O4': (65.506,56.541,52.139)
C5': (67.904,56.670,51.791)
P: (68.248,59.114,50.932)
C4': (66.777,55.900,52.429)
C2': (65.172,54.186,52.120)
O2': (64.918,53.810,53.456)
N1: (64.096,55.741,50.449)
O4: (62.797,56.290,46.684)
O2: (61.985,54.991,50.944)
C6: (64.961,56.219,49.486)
C5: (64.595,56.420,48.219)
O3': (67.571,53.608,52.461)
C2: (69.736,47.043,53.933)
OP1: (70.012,53.043,52.450)
OP2: (68.831,53.780,50.286)
C4: (70.110,48.572,55.653)
O5': (68.383,51.533,51.301)
C3': (67.218,48.907,50.829)
C1': (69.167,47.832,51.641)
O4': (69.572,48.942,50.855)
C5': (68.528,50.942,49.993)
P: (68.801,53.046,51.585)
O2: (69.668,45.874,53.502)
C4': (68.441,49.436,50.093)
C2': (67.692,47.547,51.331)
O2': (67.610,46.529,50.351)
N1: (69.476,48.118,53.057)
N3: (70.052,47.307,55.223)
N4: (70.439,48.785,56.930)
C6: (69.526,49.407,53.518)
C5: (69.837,49.676,54.792)
O3': (66.103,48.793,49.947)
OP1: (70.012,53.043,52.450)
OP2: (68.831,53.780,50.286)
C4: (70.110,48.572,55.653)
O5': (68.383,51.533,51.301)
C3': (67.218,48.907,50.829)
C1': (69.167,47.832,51.641)
O4': (69.572,48.942,50.855)
C5': (68.528,50.942,49.993)
P: (68.801,53.046,51.585)
O2: (69.668,45.874,53.502)
C4': (68.441,49.436,50.093)
C2': (67.692,47.547,51.331)
O2': (67.610,46.529,50.351)
N1: (69.476,48.118,53.057)
N3: (70.052,47.307,55.223)
N4: (70.439,48.785,56.930)
C6: (69.526,49.407,53.518)
C5: (69.837,49.676,54.792)
O3': (66.103,48.793,49.947)
Image (generated by PyMOL):