Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0721:0722
Extra
PDB:
ATOM 1 O3' U A 720 67.661 61.809 51.535 1.00 56.46 O
ATOM 2 P U A 721 68.409 60.432 51.226 1.00 58.89 P
ATOM 3 OP1 U A 721 69.859 60.590 51.503 1.00 58.50 O
ATOM 4 OP2 U A 721 67.960 59.982 49.883 1.00 57.71 O
ATOM 5 O5' U A 721 67.791 59.448 52.312 1.00 63.87 O
ATOM 6 C5' U A 721 67.983 58.040 52.197 1.00 71.57 C
ATOM 7 C4' U A 721 66.769 57.291 52.690 1.00 75.99 C
ATOM 8 O4' U A 721 65.543 57.918 52.219 1.00 77.09 O
ATOM 9 C3' U A 721 66.717 55.888 52.118 1.00 79.02 C
ATOM 10 O3' U A 721 67.576 55.002 52.812 1.00 81.76 O
ATOM 11 C2' U A 721 65.234 55.556 52.166 1.00 79.10 C
ATOM 12 O2' U A 721 64.793 55.138 53.442 1.00 79.35 O
ATOM 13 C1' U A 721 64.623 56.914 51.800 1.00 77.93 C
ATOM 14 N1 U A 721 64.393 57.073 50.353 1.00 77.08 N
ATOM 15 C2 U A 721 63.264 56.489 49.806 1.00 77.12 C
ATOM 16 O2 U A 721 62.466 55.835 50.462 1.00 78.60 O
ATOM 17 N3 U A 721 63.103 56.695 48.460 1.00 76.09 N
ATOM 18 C4 U A 721 63.933 57.403 47.622 1.00 75.87 C
ATOM 19 O4 U A 721 63.621 57.540 46.440 1.00 77.03 O
ATOM 20 C5 U A 721 65.082 57.963 48.253 1.00 76.16 C
ATOM 21 C6 U A 721 65.269 57.786 49.560 1.00 76.59 C
ATOM 22 P C A 722 68.782 54.299 52.020 1.00 85.27 P
ATOM 23 OP1 C A 722 69.848 53.986 53.009 1.00 84.72 O
ATOM 24 OP2 C A 722 69.111 55.131 50.828 1.00 85.55 O
ATOM 25 O5' C A 722 68.130 52.941 51.500 1.00 87.77 O
TER
ATOM 1 O3' U B 721 67.576 55.002 52.812 1.00 81.76 O
ATOM 2 P C B 722 68.782 54.299 52.020 1.00 85.27 P
ATOM 3 OP1 C B 722 69.848 53.986 53.009 1.00 84.72 O
ATOM 4 OP2 C B 722 69.111 55.131 50.828 1.00 85.55 O
ATOM 5 O5' C B 722 68.130 52.941 51.500 1.00 87.77 O
ATOM 6 C5' C B 722 68.381 52.446 50.171 1.00 91.90 C
ATOM 7 C4' C B 722 68.418 50.938 50.186 1.00 95.27 C
ATOM 8 O4' C B 722 69.568 50.497 50.955 1.00 97.00 O
ATOM 9 C3' C B 722 67.224 50.281 50.862 1.00 96.31 C
ATOM 10 O3' C B 722 66.143 50.126 49.940 1.00 96.37 O
ATOM 11 C2' C B 722 67.795 48.940 51.316 1.00 97.90 C
ATOM 12 O2' C B 722 67.827 47.977 50.279 1.00 98.14 O
ATOM 13 C1' C B 722 69.234 49.325 51.684 1.00 98.74 C
ATOM 14 N1 C B 722 69.491 49.571 53.122 1.00100.38 N
ATOM 15 C2 C B 722 69.943 48.503 53.934 1.00101.37 C
ATOM 16 O2 C B 722 70.095 47.369 53.432 1.00101.43 O
ATOM 17 N3 C B 722 70.203 48.739 55.245 1.00101.66 N
ATOM 18 C4 C B 722 70.032 49.964 55.753 1.00101.09 C
ATOM 19 N4 C B 722 70.313 50.149 57.046 1.00100.27 N
ATOM 20 C5 C B 722 69.567 51.054 54.957 1.00100.44 C
ATOM 21 C6 C B 722 69.308 50.816 53.664 1.00100.19 C
ATOM 22 P A B 723 64.723 50.822 50.238 1.00 96.65 P
ATOM 23 OP1 A B 723 63.755 50.324 49.224 1.00 96.71 O
ATOM 24 OP2 A B 723 64.941 52.287 50.386 1.00 97.42 O
ATOM 25 O5' A B 723 64.291 50.228 51.651 1.00 94.83 O
TER
ATOM 2 P U A 721 68.409 60.432 51.226 1.00 58.89 P
ATOM 3 OP1 U A 721 69.859 60.590 51.503 1.00 58.50 O
ATOM 4 OP2 U A 721 67.960 59.982 49.883 1.00 57.71 O
ATOM 5 O5' U A 721 67.791 59.448 52.312 1.00 63.87 O
ATOM 6 C5' U A 721 67.983 58.040 52.197 1.00 71.57 C
ATOM 7 C4' U A 721 66.769 57.291 52.690 1.00 75.99 C
ATOM 8 O4' U A 721 65.543 57.918 52.219 1.00 77.09 O
ATOM 9 C3' U A 721 66.717 55.888 52.118 1.00 79.02 C
ATOM 10 O3' U A 721 67.576 55.002 52.812 1.00 81.76 O
ATOM 11 C2' U A 721 65.234 55.556 52.166 1.00 79.10 C
ATOM 12 O2' U A 721 64.793 55.138 53.442 1.00 79.35 O
ATOM 13 C1' U A 721 64.623 56.914 51.800 1.00 77.93 C
ATOM 14 N1 U A 721 64.393 57.073 50.353 1.00 77.08 N
ATOM 15 C2 U A 721 63.264 56.489 49.806 1.00 77.12 C
ATOM 16 O2 U A 721 62.466 55.835 50.462 1.00 78.60 O
ATOM 17 N3 U A 721 63.103 56.695 48.460 1.00 76.09 N
ATOM 18 C4 U A 721 63.933 57.403 47.622 1.00 75.87 C
ATOM 19 O4 U A 721 63.621 57.540 46.440 1.00 77.03 O
ATOM 20 C5 U A 721 65.082 57.963 48.253 1.00 76.16 C
ATOM 21 C6 U A 721 65.269 57.786 49.560 1.00 76.59 C
ATOM 22 P C A 722 68.782 54.299 52.020 1.00 85.27 P
ATOM 23 OP1 C A 722 69.848 53.986 53.009 1.00 84.72 O
ATOM 24 OP2 C A 722 69.111 55.131 50.828 1.00 85.55 O
ATOM 25 O5' C A 722 68.130 52.941 51.500 1.00 87.77 O
TER
ATOM 1 O3' U B 721 67.576 55.002 52.812 1.00 81.76 O
ATOM 2 P C B 722 68.782 54.299 52.020 1.00 85.27 P
ATOM 3 OP1 C B 722 69.848 53.986 53.009 1.00 84.72 O
ATOM 4 OP2 C B 722 69.111 55.131 50.828 1.00 85.55 O
ATOM 5 O5' C B 722 68.130 52.941 51.500 1.00 87.77 O
ATOM 6 C5' C B 722 68.381 52.446 50.171 1.00 91.90 C
ATOM 7 C4' C B 722 68.418 50.938 50.186 1.00 95.27 C
ATOM 8 O4' C B 722 69.568 50.497 50.955 1.00 97.00 O
ATOM 9 C3' C B 722 67.224 50.281 50.862 1.00 96.31 C
ATOM 10 O3' C B 722 66.143 50.126 49.940 1.00 96.37 O
ATOM 11 C2' C B 722 67.795 48.940 51.316 1.00 97.90 C
ATOM 12 O2' C B 722 67.827 47.977 50.279 1.00 98.14 O
ATOM 13 C1' C B 722 69.234 49.325 51.684 1.00 98.74 C
ATOM 14 N1 C B 722 69.491 49.571 53.122 1.00100.38 N
ATOM 15 C2 C B 722 69.943 48.503 53.934 1.00101.37 C
ATOM 16 O2 C B 722 70.095 47.369 53.432 1.00101.43 O
ATOM 17 N3 C B 722 70.203 48.739 55.245 1.00101.66 N
ATOM 18 C4 C B 722 70.032 49.964 55.753 1.00101.09 C
ATOM 19 N4 C B 722 70.313 50.149 57.046 1.00100.27 N
ATOM 20 C5 C B 722 69.567 51.054 54.957 1.00100.44 C
ATOM 21 C6 C B 722 69.308 50.816 53.664 1.00100.19 C
ATOM 22 P A B 723 64.723 50.822 50.238 1.00 96.65 P
ATOM 23 OP1 A B 723 63.755 50.324 49.224 1.00 96.71 O
ATOM 24 OP2 A B 723 64.941 52.287 50.386 1.00 97.42 O
ATOM 25 O5' A B 723 64.291 50.228 51.651 1.00 94.83 O
TER
Atoms:
C4: (63.933,57.403,47.622)
N3: (63.103,56.695,48.460)
OP1: (69.859,60.590,51.503)
OP2: (67.960,59.982,49.883)
C2: (63.264,56.489,49.806)
C1': (64.623,56.914,51.800)
C3': (66.717,55.888,52.118)
O5': (67.791,59.448,52.312)
O4': (65.543,57.918,52.219)
C5': (67.983,58.040,52.197)
P: (68.409,60.432,51.226)
C4': (66.769,57.291,52.690)
C2': (65.234,55.556,52.166)
O2': (64.793,55.138,53.442)
N1: (64.393,57.073,50.353)
O4: (63.621,57.540,46.440)
O2: (62.466,55.835,50.462)
C6: (65.269,57.786,49.560)
C5: (65.082,57.963,48.253)
O3': (67.576,55.002,52.812)
N3: (63.103,56.695,48.460)
OP1: (69.859,60.590,51.503)
OP2: (67.960,59.982,49.883)
C2: (63.264,56.489,49.806)
C1': (64.623,56.914,51.800)
C3': (66.717,55.888,52.118)
O5': (67.791,59.448,52.312)
O4': (65.543,57.918,52.219)
C5': (67.983,58.040,52.197)
P: (68.409,60.432,51.226)
C4': (66.769,57.291,52.690)
C2': (65.234,55.556,52.166)
O2': (64.793,55.138,53.442)
N1: (64.393,57.073,50.353)
O4: (63.621,57.540,46.440)
O2: (62.466,55.835,50.462)
C6: (65.269,57.786,49.560)
C5: (65.082,57.963,48.253)
O3': (67.576,55.002,52.812)
C2: (69.943,48.503,53.934)
OP1: (69.848,53.986,53.009)
OP2: (69.111,55.131,50.828)
C4: (70.032,49.964,55.753)
O5': (68.130,52.941,51.500)
C3': (67.224,50.281,50.862)
C1': (69.234,49.325,51.684)
O4': (69.568,50.497,50.955)
C5': (68.381,52.446,50.171)
P: (68.782,54.299,52.020)
O2: (70.095,47.369,53.432)
C4': (68.418,50.938,50.186)
C2': (67.795,48.940,51.316)
O2': (67.827,47.977,50.279)
N1: (69.491,49.571,53.122)
N3: (70.203,48.739,55.245)
N4: (70.313,50.149,57.046)
C6: (69.308,50.816,53.664)
C5: (69.567,51.054,54.957)
O3': (66.143,50.126,49.940)
OP1: (69.848,53.986,53.009)
OP2: (69.111,55.131,50.828)
C4: (70.032,49.964,55.753)
O5': (68.130,52.941,51.500)
C3': (67.224,50.281,50.862)
C1': (69.234,49.325,51.684)
O4': (69.568,50.497,50.955)
C5': (68.381,52.446,50.171)
P: (68.782,54.299,52.020)
O2: (70.095,47.369,53.432)
C4': (68.418,50.938,50.186)
C2': (67.795,48.940,51.316)
O2': (67.827,47.977,50.279)
N1: (69.491,49.571,53.122)
N3: (70.203,48.739,55.245)
N4: (70.313,50.149,57.046)
C6: (69.308,50.816,53.664)
C5: (69.567,51.054,54.957)
O3': (66.143,50.126,49.940)
Image (generated by PyMOL):