Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0721:0722
Extra
PDB:
ATOM 1 O3' U A 720 67.676 61.665 51.499 1.00 59.57 O
ATOM 2 P U A 721 68.472 60.309 51.205 1.00 61.55 P
ATOM 3 OP1 U A 721 69.905 60.515 51.524 1.00 61.51 O
ATOM 4 OP2 U A 721 68.078 59.840 49.850 1.00 60.42 O
ATOM 5 O5' U A 721 67.870 59.303 52.277 1.00 67.09 O
ATOM 6 C5' U A 721 68.068 57.901 52.132 1.00 76.21 C
ATOM 7 C4' U A 721 66.831 57.142 52.544 1.00 82.29 C
ATOM 8 O4' U A 721 65.629 57.774 52.014 1.00 83.92 O
ATOM 9 C3' U A 721 66.809 55.744 51.956 1.00 85.98 C
ATOM 10 O3' U A 721 67.644 54.851 52.678 1.00 89.55 O
ATOM 11 C2' U A 721 65.323 55.413 51.931 1.00 86.29 C
ATOM 12 O2' U A 721 64.814 54.990 53.182 1.00 86.74 O
ATOM 13 C1' U A 721 64.728 56.774 51.546 1.00 84.77 C
ATOM 14 N1 U A 721 64.553 56.949 50.091 1.00 83.61 N
ATOM 15 C2 U A 721 63.449 56.367 49.491 1.00 83.22 C
ATOM 16 O2 U A 721 62.628 55.706 50.104 1.00 84.74 O
ATOM 17 N3 U A 721 63.343 56.583 48.143 1.00 82.70 N
ATOM 18 C4 U A 721 64.204 57.301 47.346 1.00 82.91 C
ATOM 19 O4 U A 721 63.953 57.426 46.148 1.00 83.72 O
ATOM 20 C5 U A 721 65.323 57.862 48.030 1.00 82.67 C
ATOM 21 C6 U A 721 65.457 57.673 49.342 1.00 83.08 C
ATOM 22 P C A 722 68.825 54.078 51.905 1.00 93.59 P
ATOM 23 OP1 C A 722 69.811 53.626 52.923 1.00 93.78 O
ATOM 24 OP2 C A 722 69.286 54.918 50.765 1.00 93.39 O
ATOM 25 O5' C A 722 68.078 52.809 51.301 1.00 95.77 O
TER
ATOM 1 O3' U B 721 67.644 54.851 52.678 1.00 89.55 O
ATOM 2 P C B 722 68.825 54.078 51.905 1.00 93.59 P
ATOM 3 OP1 C B 722 69.811 53.626 52.923 1.00 93.78 O
ATOM 4 OP2 C B 722 69.286 54.918 50.765 1.00 93.39 O
ATOM 5 O5' C B 722 68.078 52.809 51.301 1.00 95.77 O
ATOM 6 C5' C B 722 68.447 52.249 50.027 1.00 99.70 C
ATOM 7 C4' C B 722 68.402 50.743 50.104 1.00102.66 C
ATOM 8 O4' C B 722 69.511 50.267 50.909 1.00104.25 O
ATOM 9 C3' C B 722 67.160 50.193 50.788 1.00103.99 C
ATOM 10 O3' C B 722 66.075 50.083 49.865 1.00103.74 O
ATOM 11 C2' C B 722 67.637 48.841 51.312 1.00105.40 C
ATOM 12 O2' C B 722 67.602 47.825 50.329 1.00105.94 O
ATOM 13 C1' C B 722 69.098 49.144 51.674 1.00106.47 C
ATOM 14 N1 C B 722 69.368 49.417 53.104 1.00108.56 N
ATOM 15 C2 C B 722 69.654 48.335 53.971 1.00109.83 C
ATOM 16 O2 C B 722 69.658 47.170 53.520 1.00110.03 O
ATOM 17 N3 C B 722 69.919 48.591 55.276 1.00109.98 N
ATOM 18 C4 C B 722 69.911 49.851 55.727 1.00109.37 C
ATOM 19 N4 C B 722 70.188 50.055 57.018 1.00108.79 N
ATOM 20 C5 C B 722 69.621 50.958 54.875 1.00108.68 C
ATOM 21 C6 C B 722 69.355 50.698 53.588 1.00108.57 C
ATOM 22 P A B 723 64.689 50.851 50.156 1.00104.24 P
ATOM 23 OP1 A B 723 63.718 50.454 49.099 1.00103.95 O
ATOM 24 OP2 A B 723 64.982 52.293 50.379 1.00104.59 O
ATOM 25 O5' A B 723 64.190 50.232 51.534 1.00102.08 O
TER
ATOM 2 P U A 721 68.472 60.309 51.205 1.00 61.55 P
ATOM 3 OP1 U A 721 69.905 60.515 51.524 1.00 61.51 O
ATOM 4 OP2 U A 721 68.078 59.840 49.850 1.00 60.42 O
ATOM 5 O5' U A 721 67.870 59.303 52.277 1.00 67.09 O
ATOM 6 C5' U A 721 68.068 57.901 52.132 1.00 76.21 C
ATOM 7 C4' U A 721 66.831 57.142 52.544 1.00 82.29 C
ATOM 8 O4' U A 721 65.629 57.774 52.014 1.00 83.92 O
ATOM 9 C3' U A 721 66.809 55.744 51.956 1.00 85.98 C
ATOM 10 O3' U A 721 67.644 54.851 52.678 1.00 89.55 O
ATOM 11 C2' U A 721 65.323 55.413 51.931 1.00 86.29 C
ATOM 12 O2' U A 721 64.814 54.990 53.182 1.00 86.74 O
ATOM 13 C1' U A 721 64.728 56.774 51.546 1.00 84.77 C
ATOM 14 N1 U A 721 64.553 56.949 50.091 1.00 83.61 N
ATOM 15 C2 U A 721 63.449 56.367 49.491 1.00 83.22 C
ATOM 16 O2 U A 721 62.628 55.706 50.104 1.00 84.74 O
ATOM 17 N3 U A 721 63.343 56.583 48.143 1.00 82.70 N
ATOM 18 C4 U A 721 64.204 57.301 47.346 1.00 82.91 C
ATOM 19 O4 U A 721 63.953 57.426 46.148 1.00 83.72 O
ATOM 20 C5 U A 721 65.323 57.862 48.030 1.00 82.67 C
ATOM 21 C6 U A 721 65.457 57.673 49.342 1.00 83.08 C
ATOM 22 P C A 722 68.825 54.078 51.905 1.00 93.59 P
ATOM 23 OP1 C A 722 69.811 53.626 52.923 1.00 93.78 O
ATOM 24 OP2 C A 722 69.286 54.918 50.765 1.00 93.39 O
ATOM 25 O5' C A 722 68.078 52.809 51.301 1.00 95.77 O
TER
ATOM 1 O3' U B 721 67.644 54.851 52.678 1.00 89.55 O
ATOM 2 P C B 722 68.825 54.078 51.905 1.00 93.59 P
ATOM 3 OP1 C B 722 69.811 53.626 52.923 1.00 93.78 O
ATOM 4 OP2 C B 722 69.286 54.918 50.765 1.00 93.39 O
ATOM 5 O5' C B 722 68.078 52.809 51.301 1.00 95.77 O
ATOM 6 C5' C B 722 68.447 52.249 50.027 1.00 99.70 C
ATOM 7 C4' C B 722 68.402 50.743 50.104 1.00102.66 C
ATOM 8 O4' C B 722 69.511 50.267 50.909 1.00104.25 O
ATOM 9 C3' C B 722 67.160 50.193 50.788 1.00103.99 C
ATOM 10 O3' C B 722 66.075 50.083 49.865 1.00103.74 O
ATOM 11 C2' C B 722 67.637 48.841 51.312 1.00105.40 C
ATOM 12 O2' C B 722 67.602 47.825 50.329 1.00105.94 O
ATOM 13 C1' C B 722 69.098 49.144 51.674 1.00106.47 C
ATOM 14 N1 C B 722 69.368 49.417 53.104 1.00108.56 N
ATOM 15 C2 C B 722 69.654 48.335 53.971 1.00109.83 C
ATOM 16 O2 C B 722 69.658 47.170 53.520 1.00110.03 O
ATOM 17 N3 C B 722 69.919 48.591 55.276 1.00109.98 N
ATOM 18 C4 C B 722 69.911 49.851 55.727 1.00109.37 C
ATOM 19 N4 C B 722 70.188 50.055 57.018 1.00108.79 N
ATOM 20 C5 C B 722 69.621 50.958 54.875 1.00108.68 C
ATOM 21 C6 C B 722 69.355 50.698 53.588 1.00108.57 C
ATOM 22 P A B 723 64.689 50.851 50.156 1.00104.24 P
ATOM 23 OP1 A B 723 63.718 50.454 49.099 1.00103.95 O
ATOM 24 OP2 A B 723 64.982 52.293 50.379 1.00104.59 O
ATOM 25 O5' A B 723 64.190 50.232 51.534 1.00102.08 O
TER
Atoms:
C4: (64.204,57.301,47.346)
N3: (63.343,56.583,48.143)
OP1: (69.905,60.515,51.524)
OP2: (68.078,59.840,49.850)
C2: (63.449,56.367,49.491)
C1': (64.728,56.774,51.546)
C3': (66.809,55.744,51.956)
O5': (67.870,59.303,52.277)
O4': (65.629,57.774,52.014)
C5': (68.068,57.901,52.132)
P: (68.472,60.309,51.205)
C4': (66.831,57.142,52.544)
C2': (65.323,55.413,51.931)
O2': (64.814,54.990,53.182)
N1: (64.553,56.949,50.091)
O4: (63.953,57.426,46.148)
O2: (62.628,55.706,50.104)
C6: (65.457,57.673,49.342)
C5: (65.323,57.862,48.030)
O3': (67.644,54.851,52.678)
N3: (63.343,56.583,48.143)
OP1: (69.905,60.515,51.524)
OP2: (68.078,59.840,49.850)
C2: (63.449,56.367,49.491)
C1': (64.728,56.774,51.546)
C3': (66.809,55.744,51.956)
O5': (67.870,59.303,52.277)
O4': (65.629,57.774,52.014)
C5': (68.068,57.901,52.132)
P: (68.472,60.309,51.205)
C4': (66.831,57.142,52.544)
C2': (65.323,55.413,51.931)
O2': (64.814,54.990,53.182)
N1: (64.553,56.949,50.091)
O4: (63.953,57.426,46.148)
O2: (62.628,55.706,50.104)
C6: (65.457,57.673,49.342)
C5: (65.323,57.862,48.030)
O3': (67.644,54.851,52.678)
C2: (69.654,48.335,53.971)
OP1: (69.811,53.626,52.923)
OP2: (69.286,54.918,50.765)
C4: (69.911,49.851,55.727)
O5': (68.078,52.809,51.301)
C3': (67.160,50.193,50.788)
C1': (69.098,49.144,51.674)
O4': (69.511,50.267,50.909)
C5': (68.447,52.249,50.027)
P: (68.825,54.078,51.905)
O2: (69.658,47.170,53.520)
C4': (68.402,50.743,50.104)
C2': (67.637,48.841,51.312)
O2': (67.602,47.825,50.329)
N1: (69.368,49.417,53.104)
N3: (69.919,48.591,55.276)
N4: (70.188,50.055,57.018)
C6: (69.355,50.698,53.588)
C5: (69.621,50.958,54.875)
O3': (66.075,50.083,49.865)
OP1: (69.811,53.626,52.923)
OP2: (69.286,54.918,50.765)
C4: (69.911,49.851,55.727)
O5': (68.078,52.809,51.301)
C3': (67.160,50.193,50.788)
C1': (69.098,49.144,51.674)
O4': (69.511,50.267,50.909)
C5': (68.447,52.249,50.027)
P: (68.825,54.078,51.905)
O2: (69.658,47.170,53.520)
C4': (68.402,50.743,50.104)
C2': (67.637,48.841,51.312)
O2': (67.602,47.825,50.329)
N1: (69.368,49.417,53.104)
N3: (69.919,48.591,55.276)
N4: (70.188,50.055,57.018)
C6: (69.355,50.698,53.588)
C5: (69.621,50.958,54.875)
O3': (66.075,50.083,49.865)
Image (generated by PyMOL):