Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0721:0722
Extra
PDB:
ATOM 1 O3' U A 720 67.621 61.677 51.567 1.00 63.62 O
ATOM 2 P U A 721 68.422 60.335 51.219 1.00 65.47 P
ATOM 3 OP1 U A 721 69.867 60.570 51.471 1.00 64.66 O
ATOM 4 OP2 U A 721 67.975 59.886 49.874 1.00 63.73 O
ATOM 5 O5' U A 721 67.885 59.304 52.308 1.00 71.20 O
ATOM 6 C5' U A 721 68.127 57.896 52.167 1.00 80.28 C
ATOM 7 C4' U A 721 66.919 57.095 52.610 1.00 86.08 C
ATOM 8 O4' U A 721 65.686 57.735 52.162 1.00 87.23 O
ATOM 9 C3' U A 721 66.876 55.710 51.985 1.00 89.10 C
ATOM 10 O3' U A 721 67.717 54.774 52.644 1.00 92.96 O
ATOM 11 C2' U A 721 65.391 55.379 51.999 1.00 88.86 C
ATOM 12 O2' U A 721 64.932 54.931 53.258 1.00 88.87 O
ATOM 13 C1' U A 721 64.786 56.749 51.667 1.00 87.56 C
ATOM 14 N1 U A 721 64.617 56.965 50.218 1.00 85.99 N
ATOM 15 C2 U A 721 63.496 56.436 49.609 1.00 85.66 C
ATOM 16 O2 U A 721 62.648 55.800 50.212 1.00 86.55 O
ATOM 17 N3 U A 721 63.403 56.676 48.264 1.00 85.50 N
ATOM 18 C4 U A 721 64.293 57.373 47.482 1.00 85.91 C
ATOM 19 O4 U A 721 64.059 57.515 46.283 1.00 87.51 O
ATOM 20 C5 U A 721 65.426 57.885 48.177 1.00 85.39 C
ATOM 21 C6 U A 721 65.547 57.672 49.484 1.00 85.51 C
ATOM 22 P C A 722 68.829 53.979 51.794 1.00 97.42 P
ATOM 23 OP1 C A 722 69.907 53.556 52.730 1.00 97.34 O
ATOM 24 OP2 C A 722 69.177 54.798 50.599 1.00 96.61 O
ATOM 25 O5' C A 722 68.058 52.680 51.284 1.00100.04 O
TER
ATOM 1 O3' U B 721 67.717 54.774 52.644 1.00 92.96 O
ATOM 2 P C B 722 68.829 53.979 51.794 1.00 97.42 P
ATOM 3 OP1 C B 722 69.907 53.556 52.730 1.00 97.34 O
ATOM 4 OP2 C B 722 69.177 54.798 50.599 1.00 96.61 O
ATOM 5 O5' C B 722 68.058 52.680 51.284 1.00100.04 O
ATOM 6 C5' C B 722 68.404 52.043 50.035 1.00104.33 C
ATOM 7 C4' C B 722 68.435 50.539 50.203 1.00107.38 C
ATOM 8 O4' C B 722 69.585 50.144 50.997 1.00109.08 O
ATOM 9 C3' C B 722 67.242 49.939 50.929 1.00108.07 C
ATOM 10 O3' C B 722 66.159 49.750 50.021 1.00107.53 O
ATOM 11 C2' C B 722 67.801 48.619 51.460 1.00109.68 C
ATOM 12 O2' C B 722 67.790 47.577 50.501 1.00109.50 O
ATOM 13 C1' C B 722 69.257 48.997 51.769 1.00110.87 C
ATOM 14 N1 C B 722 69.569 49.273 53.188 1.00113.11 N
ATOM 15 C2 C B 722 70.063 48.222 54.004 1.00114.18 C
ATOM 16 O2 C B 722 70.201 47.076 53.519 1.00114.01 O
ATOM 17 N3 C B 722 70.374 48.488 55.298 1.00114.36 N
ATOM 18 C4 C B 722 70.209 49.723 55.788 1.00113.92 C
ATOM 19 N4 C B 722 70.538 49.939 57.065 1.00113.59 N
ATOM 20 C5 C B 722 69.703 50.794 54.991 1.00113.59 C
ATOM 21 C6 C B 722 69.397 50.527 53.713 1.00113.34 C
ATOM 22 P A B 723 64.813 50.614 50.186 1.00107.85 P
ATOM 23 OP1 A B 723 63.902 50.258 49.063 1.00107.63 O
ATOM 24 OP2 A B 723 65.199 52.036 50.394 1.00108.32 O
ATOM 25 O5' A B 723 64.171 50.065 51.536 1.00106.17 O
TER
ATOM 2 P U A 721 68.422 60.335 51.219 1.00 65.47 P
ATOM 3 OP1 U A 721 69.867 60.570 51.471 1.00 64.66 O
ATOM 4 OP2 U A 721 67.975 59.886 49.874 1.00 63.73 O
ATOM 5 O5' U A 721 67.885 59.304 52.308 1.00 71.20 O
ATOM 6 C5' U A 721 68.127 57.896 52.167 1.00 80.28 C
ATOM 7 C4' U A 721 66.919 57.095 52.610 1.00 86.08 C
ATOM 8 O4' U A 721 65.686 57.735 52.162 1.00 87.23 O
ATOM 9 C3' U A 721 66.876 55.710 51.985 1.00 89.10 C
ATOM 10 O3' U A 721 67.717 54.774 52.644 1.00 92.96 O
ATOM 11 C2' U A 721 65.391 55.379 51.999 1.00 88.86 C
ATOM 12 O2' U A 721 64.932 54.931 53.258 1.00 88.87 O
ATOM 13 C1' U A 721 64.786 56.749 51.667 1.00 87.56 C
ATOM 14 N1 U A 721 64.617 56.965 50.218 1.00 85.99 N
ATOM 15 C2 U A 721 63.496 56.436 49.609 1.00 85.66 C
ATOM 16 O2 U A 721 62.648 55.800 50.212 1.00 86.55 O
ATOM 17 N3 U A 721 63.403 56.676 48.264 1.00 85.50 N
ATOM 18 C4 U A 721 64.293 57.373 47.482 1.00 85.91 C
ATOM 19 O4 U A 721 64.059 57.515 46.283 1.00 87.51 O
ATOM 20 C5 U A 721 65.426 57.885 48.177 1.00 85.39 C
ATOM 21 C6 U A 721 65.547 57.672 49.484 1.00 85.51 C
ATOM 22 P C A 722 68.829 53.979 51.794 1.00 97.42 P
ATOM 23 OP1 C A 722 69.907 53.556 52.730 1.00 97.34 O
ATOM 24 OP2 C A 722 69.177 54.798 50.599 1.00 96.61 O
ATOM 25 O5' C A 722 68.058 52.680 51.284 1.00100.04 O
TER
ATOM 1 O3' U B 721 67.717 54.774 52.644 1.00 92.96 O
ATOM 2 P C B 722 68.829 53.979 51.794 1.00 97.42 P
ATOM 3 OP1 C B 722 69.907 53.556 52.730 1.00 97.34 O
ATOM 4 OP2 C B 722 69.177 54.798 50.599 1.00 96.61 O
ATOM 5 O5' C B 722 68.058 52.680 51.284 1.00100.04 O
ATOM 6 C5' C B 722 68.404 52.043 50.035 1.00104.33 C
ATOM 7 C4' C B 722 68.435 50.539 50.203 1.00107.38 C
ATOM 8 O4' C B 722 69.585 50.144 50.997 1.00109.08 O
ATOM 9 C3' C B 722 67.242 49.939 50.929 1.00108.07 C
ATOM 10 O3' C B 722 66.159 49.750 50.021 1.00107.53 O
ATOM 11 C2' C B 722 67.801 48.619 51.460 1.00109.68 C
ATOM 12 O2' C B 722 67.790 47.577 50.501 1.00109.50 O
ATOM 13 C1' C B 722 69.257 48.997 51.769 1.00110.87 C
ATOM 14 N1 C B 722 69.569 49.273 53.188 1.00113.11 N
ATOM 15 C2 C B 722 70.063 48.222 54.004 1.00114.18 C
ATOM 16 O2 C B 722 70.201 47.076 53.519 1.00114.01 O
ATOM 17 N3 C B 722 70.374 48.488 55.298 1.00114.36 N
ATOM 18 C4 C B 722 70.209 49.723 55.788 1.00113.92 C
ATOM 19 N4 C B 722 70.538 49.939 57.065 1.00113.59 N
ATOM 20 C5 C B 722 69.703 50.794 54.991 1.00113.59 C
ATOM 21 C6 C B 722 69.397 50.527 53.713 1.00113.34 C
ATOM 22 P A B 723 64.813 50.614 50.186 1.00107.85 P
ATOM 23 OP1 A B 723 63.902 50.258 49.063 1.00107.63 O
ATOM 24 OP2 A B 723 65.199 52.036 50.394 1.00108.32 O
ATOM 25 O5' A B 723 64.171 50.065 51.536 1.00106.17 O
TER
Atoms:
C4: (64.293,57.373,47.482)
N3: (63.403,56.676,48.264)
OP1: (69.867,60.570,51.471)
OP2: (67.975,59.886,49.874)
C2: (63.496,56.436,49.609)
C1': (64.786,56.749,51.667)
C3': (66.876,55.710,51.985)
O5': (67.885,59.304,52.308)
O4': (65.686,57.735,52.162)
C5': (68.127,57.896,52.167)
P: (68.422,60.335,51.219)
C4': (66.919,57.095,52.610)
C2': (65.391,55.379,51.999)
O2': (64.932,54.931,53.258)
N1: (64.617,56.965,50.218)
O4: (64.059,57.515,46.283)
O2: (62.648,55.800,50.212)
C6: (65.547,57.672,49.484)
C5: (65.426,57.885,48.177)
O3': (67.717,54.774,52.644)
N3: (63.403,56.676,48.264)
OP1: (69.867,60.570,51.471)
OP2: (67.975,59.886,49.874)
C2: (63.496,56.436,49.609)
C1': (64.786,56.749,51.667)
C3': (66.876,55.710,51.985)
O5': (67.885,59.304,52.308)
O4': (65.686,57.735,52.162)
C5': (68.127,57.896,52.167)
P: (68.422,60.335,51.219)
C4': (66.919,57.095,52.610)
C2': (65.391,55.379,51.999)
O2': (64.932,54.931,53.258)
N1: (64.617,56.965,50.218)
O4: (64.059,57.515,46.283)
O2: (62.648,55.800,50.212)
C6: (65.547,57.672,49.484)
C5: (65.426,57.885,48.177)
O3': (67.717,54.774,52.644)
C2: (70.063,48.222,54.004)
OP1: (69.907,53.556,52.730)
OP2: (69.177,54.798,50.599)
C4: (70.209,49.723,55.788)
O5': (68.058,52.680,51.284)
C3': (67.242,49.939,50.929)
C1': (69.257,48.997,51.769)
O4': (69.585,50.144,50.997)
C5': (68.404,52.043,50.035)
P: (68.829,53.979,51.794)
O2: (70.201,47.076,53.519)
C4': (68.435,50.539,50.203)
C2': (67.801,48.619,51.460)
O2': (67.790,47.577,50.501)
N1: (69.569,49.273,53.188)
N3: (70.374,48.488,55.298)
N4: (70.538,49.939,57.065)
C6: (69.397,50.527,53.713)
C5: (69.703,50.794,54.991)
O3': (66.159,49.750,50.021)
OP1: (69.907,53.556,52.730)
OP2: (69.177,54.798,50.599)
C4: (70.209,49.723,55.788)
O5': (68.058,52.680,51.284)
C3': (67.242,49.939,50.929)
C1': (69.257,48.997,51.769)
O4': (69.585,50.144,50.997)
C5': (68.404,52.043,50.035)
P: (68.829,53.979,51.794)
O2: (70.201,47.076,53.519)
C4': (68.435,50.539,50.203)
C2': (67.801,48.619,51.460)
O2': (67.790,47.577,50.501)
N1: (69.569,49.273,53.188)
N3: (70.374,48.488,55.298)
N4: (70.538,49.939,57.065)
C6: (69.397,50.527,53.713)
C5: (69.703,50.794,54.991)
O3': (66.159,49.750,50.021)
Image (generated by PyMOL):