Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0721:0722
Extra
PDB:
ATOM 1 O3' U A 720 67.466 61.599 51.484 1.00 51.33 O
ATOM 2 P U A 721 68.257 60.235 51.210 1.00 53.80 P
ATOM 3 OP1 U A 721 69.698 60.422 51.502 1.00 53.43 O
ATOM 4 OP2 U A 721 67.837 59.743 49.870 1.00 53.06 O
ATOM 5 O5' U A 721 67.668 59.254 52.315 1.00 59.81 O
ATOM 6 C5' U A 721 67.971 57.860 52.270 1.00 69.28 C
ATOM 7 C4' U A 721 66.753 57.035 52.613 1.00 75.00 C
ATOM 8 O4' U A 721 65.539 57.647 52.090 1.00 75.75 O
ATOM 9 C3' U A 721 66.792 55.663 51.967 1.00 78.85 C
ATOM 10 O3' U A 721 67.646 54.767 52.678 1.00 83.49 O
ATOM 11 C2' U A 721 65.317 55.280 51.909 1.00 78.23 C
ATOM 12 O2' U A 721 64.817 54.782 53.133 1.00 78.17 O
ATOM 13 C1' U A 721 64.667 56.636 51.598 1.00 76.56 C
ATOM 14 N1 U A 721 64.418 56.885 50.165 1.00 75.11 N
ATOM 15 C2 U A 721 63.192 56.506 49.640 1.00 74.50 C
ATOM 16 O2 U A 721 62.325 55.955 50.299 1.00 75.24 O
ATOM 17 N3 U A 721 63.018 56.795 48.311 1.00 73.92 N
ATOM 18 C4 U A 721 63.922 57.401 47.466 1.00 74.58 C
ATOM 19 O4 U A 721 63.601 57.622 46.298 1.00 75.37 O
ATOM 20 C5 U A 721 65.168 57.746 48.072 1.00 74.44 C
ATOM 21 C6 U A 721 65.370 57.485 49.364 1.00 74.76 C
ATOM 22 P C A 722 68.861 54.040 51.903 1.00 87.38 P
ATOM 23 OP1 C A 722 69.860 53.630 52.925 1.00 87.49 O
ATOM 24 OP2 C A 722 69.293 54.886 50.754 1.00 86.49 O
ATOM 25 O5' C A 722 68.179 52.726 51.320 1.00 88.80 O
TER
ATOM 1 O3' U B 721 67.646 54.767 52.678 1.00 83.49 O
ATOM 2 P C B 722 68.861 54.040 51.903 1.00 87.38 P
ATOM 3 OP1 C B 722 69.860 53.630 52.925 1.00 87.49 O
ATOM 4 OP2 C B 722 69.293 54.886 50.754 1.00 86.49 O
ATOM 5 O5' C B 722 68.179 52.726 51.320 1.00 88.80 O
ATOM 6 C5' C B 722 68.555 52.183 50.044 1.00 92.26 C
ATOM 7 C4' C B 722 68.410 50.682 50.071 1.00 95.41 C
ATOM 8 O4' C B 722 69.477 50.106 50.869 1.00 96.66 O
ATOM 9 C3' C B 722 67.133 50.185 50.733 1.00 96.88 C
ATOM 10 O3' C B 722 66.025 50.205 49.835 1.00 96.76 O
ATOM 11 C2' C B 722 67.518 48.781 51.186 1.00 97.95 C
ATOM 12 O2' C B 722 67.450 47.816 50.152 1.00 98.43 O
ATOM 13 C1' C B 722 68.981 48.987 51.593 1.00 98.45 C
ATOM 14 N1 C B 722 69.188 49.230 53.036 1.00 99.85 N
ATOM 15 C2 C B 722 69.456 48.130 53.889 1.00100.65 C
ATOM 16 O2 C B 722 69.487 46.973 53.411 1.00 99.70 O
ATOM 17 N3 C B 722 69.673 48.362 55.207 1.00100.92 N
ATOM 18 C4 C B 722 69.632 49.612 55.685 1.00100.45 C
ATOM 19 N4 C B 722 69.871 49.792 56.988 1.00100.09 N
ATOM 20 C5 C B 722 69.349 50.735 54.849 1.00 99.68 C
ATOM 21 C6 C B 722 69.134 50.501 53.548 1.00 99.36 C
ATOM 22 P A B 723 64.694 51.020 50.225 1.00 96.58 P
ATOM 23 OP1 A B 723 63.668 50.735 49.183 1.00 96.36 O
ATOM 24 OP2 A B 723 65.085 52.427 50.507 1.00 96.77 O
ATOM 25 O5' A B 723 64.219 50.355 51.593 1.00 94.82 O
TER
ATOM 2 P U A 721 68.257 60.235 51.210 1.00 53.80 P
ATOM 3 OP1 U A 721 69.698 60.422 51.502 1.00 53.43 O
ATOM 4 OP2 U A 721 67.837 59.743 49.870 1.00 53.06 O
ATOM 5 O5' U A 721 67.668 59.254 52.315 1.00 59.81 O
ATOM 6 C5' U A 721 67.971 57.860 52.270 1.00 69.28 C
ATOM 7 C4' U A 721 66.753 57.035 52.613 1.00 75.00 C
ATOM 8 O4' U A 721 65.539 57.647 52.090 1.00 75.75 O
ATOM 9 C3' U A 721 66.792 55.663 51.967 1.00 78.85 C
ATOM 10 O3' U A 721 67.646 54.767 52.678 1.00 83.49 O
ATOM 11 C2' U A 721 65.317 55.280 51.909 1.00 78.23 C
ATOM 12 O2' U A 721 64.817 54.782 53.133 1.00 78.17 O
ATOM 13 C1' U A 721 64.667 56.636 51.598 1.00 76.56 C
ATOM 14 N1 U A 721 64.418 56.885 50.165 1.00 75.11 N
ATOM 15 C2 U A 721 63.192 56.506 49.640 1.00 74.50 C
ATOM 16 O2 U A 721 62.325 55.955 50.299 1.00 75.24 O
ATOM 17 N3 U A 721 63.018 56.795 48.311 1.00 73.92 N
ATOM 18 C4 U A 721 63.922 57.401 47.466 1.00 74.58 C
ATOM 19 O4 U A 721 63.601 57.622 46.298 1.00 75.37 O
ATOM 20 C5 U A 721 65.168 57.746 48.072 1.00 74.44 C
ATOM 21 C6 U A 721 65.370 57.485 49.364 1.00 74.76 C
ATOM 22 P C A 722 68.861 54.040 51.903 1.00 87.38 P
ATOM 23 OP1 C A 722 69.860 53.630 52.925 1.00 87.49 O
ATOM 24 OP2 C A 722 69.293 54.886 50.754 1.00 86.49 O
ATOM 25 O5' C A 722 68.179 52.726 51.320 1.00 88.80 O
TER
ATOM 1 O3' U B 721 67.646 54.767 52.678 1.00 83.49 O
ATOM 2 P C B 722 68.861 54.040 51.903 1.00 87.38 P
ATOM 3 OP1 C B 722 69.860 53.630 52.925 1.00 87.49 O
ATOM 4 OP2 C B 722 69.293 54.886 50.754 1.00 86.49 O
ATOM 5 O5' C B 722 68.179 52.726 51.320 1.00 88.80 O
ATOM 6 C5' C B 722 68.555 52.183 50.044 1.00 92.26 C
ATOM 7 C4' C B 722 68.410 50.682 50.071 1.00 95.41 C
ATOM 8 O4' C B 722 69.477 50.106 50.869 1.00 96.66 O
ATOM 9 C3' C B 722 67.133 50.185 50.733 1.00 96.88 C
ATOM 10 O3' C B 722 66.025 50.205 49.835 1.00 96.76 O
ATOM 11 C2' C B 722 67.518 48.781 51.186 1.00 97.95 C
ATOM 12 O2' C B 722 67.450 47.816 50.152 1.00 98.43 O
ATOM 13 C1' C B 722 68.981 48.987 51.593 1.00 98.45 C
ATOM 14 N1 C B 722 69.188 49.230 53.036 1.00 99.85 N
ATOM 15 C2 C B 722 69.456 48.130 53.889 1.00100.65 C
ATOM 16 O2 C B 722 69.487 46.973 53.411 1.00 99.70 O
ATOM 17 N3 C B 722 69.673 48.362 55.207 1.00100.92 N
ATOM 18 C4 C B 722 69.632 49.612 55.685 1.00100.45 C
ATOM 19 N4 C B 722 69.871 49.792 56.988 1.00100.09 N
ATOM 20 C5 C B 722 69.349 50.735 54.849 1.00 99.68 C
ATOM 21 C6 C B 722 69.134 50.501 53.548 1.00 99.36 C
ATOM 22 P A B 723 64.694 51.020 50.225 1.00 96.58 P
ATOM 23 OP1 A B 723 63.668 50.735 49.183 1.00 96.36 O
ATOM 24 OP2 A B 723 65.085 52.427 50.507 1.00 96.77 O
ATOM 25 O5' A B 723 64.219 50.355 51.593 1.00 94.82 O
TER
Atoms:
C4: (63.922,57.401,47.466)
N3: (63.018,56.795,48.311)
OP1: (69.698,60.422,51.502)
OP2: (67.837,59.743,49.870)
C2: (63.192,56.506,49.640)
C1': (64.667,56.636,51.598)
C3': (66.792,55.663,51.967)
O5': (67.668,59.254,52.315)
O4': (65.539,57.647,52.090)
C5': (67.971,57.860,52.270)
P: (68.257,60.235,51.210)
C4': (66.753,57.035,52.613)
C2': (65.317,55.280,51.909)
O2': (64.817,54.782,53.133)
N1: (64.418,56.885,50.165)
O4: (63.601,57.622,46.298)
O2: (62.325,55.955,50.299)
C6: (65.370,57.485,49.364)
C5: (65.168,57.746,48.072)
O3': (67.646,54.767,52.678)
N3: (63.018,56.795,48.311)
OP1: (69.698,60.422,51.502)
OP2: (67.837,59.743,49.870)
C2: (63.192,56.506,49.640)
C1': (64.667,56.636,51.598)
C3': (66.792,55.663,51.967)
O5': (67.668,59.254,52.315)
O4': (65.539,57.647,52.090)
C5': (67.971,57.860,52.270)
P: (68.257,60.235,51.210)
C4': (66.753,57.035,52.613)
C2': (65.317,55.280,51.909)
O2': (64.817,54.782,53.133)
N1: (64.418,56.885,50.165)
O4: (63.601,57.622,46.298)
O2: (62.325,55.955,50.299)
C6: (65.370,57.485,49.364)
C5: (65.168,57.746,48.072)
O3': (67.646,54.767,52.678)
C2: (69.456,48.130,53.889)
OP1: (69.860,53.630,52.925)
OP2: (69.293,54.886,50.754)
C4: (69.632,49.612,55.685)
O5': (68.179,52.726,51.320)
C3': (67.133,50.185,50.733)
C1': (68.981,48.987,51.593)
O4': (69.477,50.106,50.869)
C5': (68.555,52.183,50.044)
P: (68.861,54.040,51.903)
O2: (69.487,46.973,53.411)
C4': (68.410,50.682,50.071)
C2': (67.518,48.781,51.186)
O2': (67.450,47.816,50.152)
N1: (69.188,49.230,53.036)
N3: (69.673,48.362,55.207)
N4: (69.871,49.792,56.988)
C6: (69.134,50.501,53.548)
C5: (69.349,50.735,54.849)
O3': (66.025,50.205,49.835)
OP1: (69.860,53.630,52.925)
OP2: (69.293,54.886,50.754)
C4: (69.632,49.612,55.685)
O5': (68.179,52.726,51.320)
C3': (67.133,50.185,50.733)
C1': (68.981,48.987,51.593)
O4': (69.477,50.106,50.869)
C5': (68.555,52.183,50.044)
P: (68.861,54.040,51.903)
O2: (69.487,46.973,53.411)
C4': (68.410,50.682,50.071)
C2': (67.518,48.781,51.186)
O2': (67.450,47.816,50.152)
N1: (69.188,49.230,53.036)
N3: (69.673,48.362,55.207)
N4: (69.871,49.792,56.988)
C6: (69.134,50.501,53.548)
C5: (69.349,50.735,54.849)
O3': (66.025,50.205,49.835)
Image (generated by PyMOL):