ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:992:989

Extra

PDB:
ATOM 1 O3' G A 91 49.999 90.291 119.523 1.00 53.05 O
ATOM 2 P A A 92 49.644 88.918 118.760 1.00 52.08 P
ATOM 3 OP1 A A 92 49.873 89.192 117.320 1.00 54.67 O
ATOM 4 OP2 A A 92 48.332 88.413 119.204 1.00 54.03 O
ATOM 5 O5' A A 92 50.741 87.881 119.266 1.00 54.08 O
ATOM 6 C5' A A 92 52.006 87.748 118.593 1.00 53.04 C
ATOM 7 C4' A A 92 52.851 86.691 119.269 1.00 53.74 C
ATOM 8 O4' A A 92 53.054 87.069 120.656 1.00 53.83 O
ATOM 9 C3' A A 92 52.269 85.287 119.370 1.00 53.63 C
ATOM 10 O3' A A 92 52.481 84.514 118.201 1.00 56.28 O
ATOM 11 C2' A A 92 53.091 84.707 120.506 1.00 54.77 C
ATOM 12 O2' A A 92 54.407 84.368 120.100 1.00 55.52 O
ATOM 13 C1' A A 92 53.151 85.901 121.456 1.00 53.64 C
ATOM 14 N9 A A 92 52.019 85.868 122.379 1.00 53.14 N
ATOM 15 C8 A A 92 50.818 86.535 122.298 1.00 53.61 C
ATOM 16 N7 A A 92 49.990 86.254 123.274 1.00 52.55 N
ATOM 17 C5 A A 92 50.696 85.351 124.058 1.00 52.69 C
ATOM 18 C6 A A 92 50.371 84.675 125.242 1.00 51.36 C
ATOM 19 N6 A A 92 49.205 84.814 125.871 1.00 49.91 N
ATOM 20 N1 A A 92 51.297 83.840 125.765 1.00 52.28 N
ATOM 21 C2 A A 92 52.474 83.703 125.132 1.00 51.88 C
ATOM 22 N3 A A 92 52.898 84.287 124.015 1.00 52.61 N
ATOM 23 C4 A A 92 51.950 85.109 123.521 1.00 53.53 C
ATOM 24 P G A 93 51.229 84.021 117.325 1.00 55.88 P
ATOM 25 OP1 G A 93 51.778 83.196 116.221 1.00 57.13 O
ATOM 26 OP2 G A 93 50.422 85.233 117.010 1.00 58.42 O
ATOM 27 O5' G A 93 50.332 83.095 118.276 1.00 57.65 O
TER

ATOM 1 O3' C B 88 38.525 89.503 127.123 1.00 43.47 O
ATOM 2 P G B 89 39.349 90.876 127.028 1.00 44.33 P
ATOM 3 OP1 G B 89 39.237 91.557 128.344 1.00 46.20 O
ATOM 4 OP2 G B 89 38.897 91.578 125.803 1.00 47.58 O
ATOM 5 O5' G B 89 40.865 90.421 126.817 1.00 44.34 O
ATOM 6 C5' G B 89 41.558 89.663 127.825 1.00 42.97 C
ATOM 7 C4' G B 89 42.920 89.236 127.330 1.00 43.47 C
ATOM 8 O4' G B 89 42.786 88.368 126.174 1.00 41.77 O
ATOM 9 C3' G B 89 43.816 90.337 126.797 1.00 44.32 C
ATOM 10 O3' G B 89 44.415 91.086 127.840 1.00 45.28 O
ATOM 11 C2' G B 89 44.848 89.545 126.010 1.00 43.41 C
ATOM 12 O2' G B 89 45.865 88.996 126.815 1.00 46.79 O
ATOM 13 C1' G B 89 43.988 88.418 125.424 1.00 44.47 C
ATOM 14 N9 G B 89 43.686 88.688 124.022 1.00 46.68 N
ATOM 15 C8 G B 89 42.532 89.195 123.478 1.00 45.56 C
ATOM 16 N7 G B 89 42.626 89.411 122.194 1.00 47.06 N
ATOM 17 C5 G B 89 43.915 89.005 121.871 1.00 47.22 C
ATOM 18 C6 G B 89 44.612 89.036 120.634 1.00 48.40 C
ATOM 19 O6 G B 89 44.222 89.464 119.538 1.00 51.99 O
ATOM 20 N1 G B 89 45.898 88.516 120.757 1.00 47.00 N
ATOM 21 C2 G B 89 46.452 88.048 121.922 1.00 46.80 C
ATOM 22 N2 G B 89 47.706 87.575 121.849 1.00 44.72 N
ATOM 23 N3 G B 89 45.822 88.039 123.080 1.00 47.66 N
ATOM 24 C4 G B 89 44.567 88.527 122.981 1.00 46.57 C
ATOM 25 P C B 90 44.342 92.687 127.802 1.00 46.93 P
ATOM 26 OP1 C B 90 45.022 93.222 129.007 1.00 49.21 O
ATOM 27 OP2 C B 90 42.930 93.071 127.532 1.00 48.69 O
ATOM 28 O5' C B 90 45.217 93.076 126.527 1.00 47.48 O
TER

Atoms:
OP1: (49.873,89.192,117.320)
OP2: (48.332,88.413,119.204)
C3': (52.269,85.287,119.370)
C1': (53.151,85.901,121.456)
C5': (52.006,87.748,118.593)
O4': (53.054,87.069,120.656)
C8: (50.818,86.535,122.298)
O2': (54.407,84.368,120.100)
C6: (50.371,84.675,125.242)
C5: (50.696,85.351,124.058)
C4: (51.950,85.109,123.521)
P: (49.644,88.918,118.760)
C4': (52.851,86.691,119.269)
C2': (53.091,84.707,120.506)
C2: (52.474,83.703,125.132)
N1: (51.297,83.840,125.765)
N3: (52.898,84.287,124.015)
N6: (49.205,84.814,125.871)
N7: (49.990,86.254,123.274)
N9: (52.019,85.868,122.379)
O5': (50.741,87.881,119.266)
O3': (52.481,84.514,118.201)
OP1: (39.237,91.557,128.344)
OP2: (38.897,91.578,125.803)
C3': (43.816,90.337,126.797)
C1': (43.988,88.418,125.424)
C5': (41.558,89.663,127.825)
O6: (44.222,89.464,119.538)
O4': (42.786,88.368,126.174)
C8: (42.532,89.195,123.478)
C2: (46.452,88.048,121.922)
C6: (44.612,89.036,120.634)
C5: (43.915,89.005,121.871)
C4: (44.567,88.527,122.981)
P: (39.349,90.876,127.028)
C4': (42.920,89.236,127.330)
C2': (44.848,89.545,126.010)
O2': (45.865,88.996,126.815)
N1: (45.898,88.516,120.757)
N2: (47.706,87.575,121.849)
N3: (45.822,88.039,123.080)
N7: (42.626,89.411,122.194)
N9: (43.686,88.688,124.022)
O5': (40.865,90.421,126.817)
O3': (44.415,91.086,127.840)
Image (generated by PyMOL):
PyMOL image
show in jmol