Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0423:0178
Extra
PDB:
ATOM 1 O3' U A 422 66.676 115.982 16.004 1.00 40.22 O
ATOM 2 P A A 423 65.668 115.687 17.214 1.00 39.53 P
ATOM 3 OP1 A A 423 65.874 116.736 18.243 1.00 39.50 O
ATOM 4 OP2 A A 423 65.826 114.259 17.582 1.00 39.13 O
ATOM 5 O5' A A 423 64.220 115.898 16.581 1.00 39.12 O
ATOM 6 C5' A A 423 63.861 117.126 15.905 1.00 38.12 C
ATOM 7 C4' A A 423 62.558 116.941 15.155 1.00 39.45 C
ATOM 8 O4' A A 423 62.720 115.895 14.163 1.00 39.33 O
ATOM 9 C3' A A 423 61.394 116.487 16.021 1.00 40.86 C
ATOM 10 O3' A A 423 60.706 117.616 16.538 1.00 43.72 O
ATOM 11 C2' A A 423 60.525 115.696 15.053 1.00 40.60 C
ATOM 12 O2' A A 423 59.686 116.525 14.278 1.00 40.57 O
ATOM 13 C1' A A 423 61.581 115.053 14.156 1.00 37.99 C
ATOM 14 N9 A A 423 62.019 113.724 14.577 1.00 38.74 N
ATOM 15 C8 A A 423 63.232 113.383 15.131 1.00 38.68 C
ATOM 16 N7 A A 423 63.375 112.100 15.342 1.00 39.83 N
ATOM 17 C5 A A 423 62.170 111.559 14.915 1.00 40.12 C
ATOM 18 C6 A A 423 61.699 110.241 14.861 1.00 40.63 C
ATOM 19 N6 A A 423 62.417 109.183 15.244 1.00 41.19 N
ATOM 20 N1 A A 423 60.450 110.041 14.388 1.00 41.24 N
ATOM 21 C2 A A 423 59.737 111.103 13.991 1.00 41.01 C
ATOM 22 N3 A A 423 60.075 112.389 13.985 1.00 40.07 N
ATOM 23 C4 A A 423 61.319 112.551 14.462 1.00 39.12 C
ATOM 24 P A A 424 59.953 117.510 17.943 1.00 44.26 P
ATOM 25 OP1 A A 424 59.144 118.742 18.108 1.00 46.08 O
ATOM 26 OP2 A A 424 60.960 117.149 18.975 1.00 46.97 O
ATOM 27 O5' A A 424 58.975 116.273 17.742 1.00 45.10 O
TER
ATOM 1 O3' A B 177 71.672 108.017 24.670 1.00 34.96 O
ATOM 2 P G B 178 72.727 107.683 23.516 1.00 38.82 P
ATOM 3 OP1 G B 178 73.453 106.452 23.934 1.00 37.36 O
ATOM 4 OP2 G B 178 73.503 108.914 23.195 1.00 38.26 O
ATOM 5 O5' G B 178 71.789 107.334 22.276 1.00 38.01 O
ATOM 6 C5' G B 178 71.016 106.122 22.252 1.00 36.44 C
ATOM 7 C4' G B 178 70.140 106.090 21.028 1.00 36.78 C
ATOM 8 O4' G B 178 69.116 107.108 21.127 1.00 37.62 O
ATOM 9 C3' G B 178 70.851 106.376 19.717 1.00 36.92 C
ATOM 10 O3' G B 178 71.440 105.173 19.229 1.00 39.45 O
ATOM 11 C2' G B 178 69.712 106.870 18.840 1.00 36.23 C
ATOM 12 O2' G B 178 68.915 105.797 18.389 1.00 37.98 O
ATOM 13 C1' G B 178 68.869 107.660 19.846 1.00 37.15 C
ATOM 14 N9 G B 178 69.121 109.098 19.914 1.00 37.76 N
ATOM 15 C8 G B 178 70.129 109.733 20.602 1.00 36.61 C
ATOM 16 N7 G B 178 70.063 111.032 20.523 1.00 35.65 N
ATOM 17 C5 G B 178 68.954 111.272 19.726 1.00 37.99 C
ATOM 18 C6 G B 178 68.384 112.496 19.294 1.00 40.77 C
ATOM 19 O6 G B 178 68.751 113.651 19.545 1.00 42.98 O
ATOM 20 N1 G B 178 67.270 112.286 18.490 1.00 40.62 N
ATOM 21 C2 G B 178 66.768 111.060 18.143 1.00 40.10 C
ATOM 22 N2 G B 178 65.681 111.072 17.348 1.00 38.96 N
ATOM 23 N3 G B 178 67.290 109.909 18.542 1.00 39.03 N
ATOM 24 C4 G B 178 68.371 110.090 19.327 1.00 37.59 C
ATOM 25 P A B 179 72.803 105.229 18.390 1.00 43.03 P
ATOM 26 OP1 A B 179 73.360 103.852 18.339 1.00 42.34 O
ATOM 27 OP2 A B 179 73.643 106.331 18.931 1.00 44.52 O
ATOM 28 O5' A B 179 72.297 105.641 16.934 1.00 45.18 O
TER
ATOM 2 P A A 423 65.668 115.687 17.214 1.00 39.53 P
ATOM 3 OP1 A A 423 65.874 116.736 18.243 1.00 39.50 O
ATOM 4 OP2 A A 423 65.826 114.259 17.582 1.00 39.13 O
ATOM 5 O5' A A 423 64.220 115.898 16.581 1.00 39.12 O
ATOM 6 C5' A A 423 63.861 117.126 15.905 1.00 38.12 C
ATOM 7 C4' A A 423 62.558 116.941 15.155 1.00 39.45 C
ATOM 8 O4' A A 423 62.720 115.895 14.163 1.00 39.33 O
ATOM 9 C3' A A 423 61.394 116.487 16.021 1.00 40.86 C
ATOM 10 O3' A A 423 60.706 117.616 16.538 1.00 43.72 O
ATOM 11 C2' A A 423 60.525 115.696 15.053 1.00 40.60 C
ATOM 12 O2' A A 423 59.686 116.525 14.278 1.00 40.57 O
ATOM 13 C1' A A 423 61.581 115.053 14.156 1.00 37.99 C
ATOM 14 N9 A A 423 62.019 113.724 14.577 1.00 38.74 N
ATOM 15 C8 A A 423 63.232 113.383 15.131 1.00 38.68 C
ATOM 16 N7 A A 423 63.375 112.100 15.342 1.00 39.83 N
ATOM 17 C5 A A 423 62.170 111.559 14.915 1.00 40.12 C
ATOM 18 C6 A A 423 61.699 110.241 14.861 1.00 40.63 C
ATOM 19 N6 A A 423 62.417 109.183 15.244 1.00 41.19 N
ATOM 20 N1 A A 423 60.450 110.041 14.388 1.00 41.24 N
ATOM 21 C2 A A 423 59.737 111.103 13.991 1.00 41.01 C
ATOM 22 N3 A A 423 60.075 112.389 13.985 1.00 40.07 N
ATOM 23 C4 A A 423 61.319 112.551 14.462 1.00 39.12 C
ATOM 24 P A A 424 59.953 117.510 17.943 1.00 44.26 P
ATOM 25 OP1 A A 424 59.144 118.742 18.108 1.00 46.08 O
ATOM 26 OP2 A A 424 60.960 117.149 18.975 1.00 46.97 O
ATOM 27 O5' A A 424 58.975 116.273 17.742 1.00 45.10 O
TER
ATOM 1 O3' A B 177 71.672 108.017 24.670 1.00 34.96 O
ATOM 2 P G B 178 72.727 107.683 23.516 1.00 38.82 P
ATOM 3 OP1 G B 178 73.453 106.452 23.934 1.00 37.36 O
ATOM 4 OP2 G B 178 73.503 108.914 23.195 1.00 38.26 O
ATOM 5 O5' G B 178 71.789 107.334 22.276 1.00 38.01 O
ATOM 6 C5' G B 178 71.016 106.122 22.252 1.00 36.44 C
ATOM 7 C4' G B 178 70.140 106.090 21.028 1.00 36.78 C
ATOM 8 O4' G B 178 69.116 107.108 21.127 1.00 37.62 O
ATOM 9 C3' G B 178 70.851 106.376 19.717 1.00 36.92 C
ATOM 10 O3' G B 178 71.440 105.173 19.229 1.00 39.45 O
ATOM 11 C2' G B 178 69.712 106.870 18.840 1.00 36.23 C
ATOM 12 O2' G B 178 68.915 105.797 18.389 1.00 37.98 O
ATOM 13 C1' G B 178 68.869 107.660 19.846 1.00 37.15 C
ATOM 14 N9 G B 178 69.121 109.098 19.914 1.00 37.76 N
ATOM 15 C8 G B 178 70.129 109.733 20.602 1.00 36.61 C
ATOM 16 N7 G B 178 70.063 111.032 20.523 1.00 35.65 N
ATOM 17 C5 G B 178 68.954 111.272 19.726 1.00 37.99 C
ATOM 18 C6 G B 178 68.384 112.496 19.294 1.00 40.77 C
ATOM 19 O6 G B 178 68.751 113.651 19.545 1.00 42.98 O
ATOM 20 N1 G B 178 67.270 112.286 18.490 1.00 40.62 N
ATOM 21 C2 G B 178 66.768 111.060 18.143 1.00 40.10 C
ATOM 22 N2 G B 178 65.681 111.072 17.348 1.00 38.96 N
ATOM 23 N3 G B 178 67.290 109.909 18.542 1.00 39.03 N
ATOM 24 C4 G B 178 68.371 110.090 19.327 1.00 37.59 C
ATOM 25 P A B 179 72.803 105.229 18.390 1.00 43.03 P
ATOM 26 OP1 A B 179 73.360 103.852 18.339 1.00 42.34 O
ATOM 27 OP2 A B 179 73.643 106.331 18.931 1.00 44.52 O
ATOM 28 O5' A B 179 72.297 105.641 16.934 1.00 45.18 O
TER
Atoms:
OP1: (65.874,116.736,18.243)
OP2: (65.826,114.259,17.582)
C3': (61.394,116.487,16.021)
C1': (61.581,115.053,14.156)
C5': (63.861,117.126,15.905)
O4': (62.720,115.895,14.163)
C8: (63.232,113.383,15.131)
O2': (59.686,116.525,14.278)
C6: (61.699,110.241,14.861)
C5: (62.170,111.559,14.915)
C4: (61.319,112.551,14.462)
P: (65.668,115.687,17.214)
C4': (62.558,116.941,15.155)
C2': (60.525,115.696,15.053)
C2: (59.737,111.103,13.991)
N1: (60.450,110.041,14.388)
N3: (60.075,112.389,13.985)
N6: (62.417,109.183,15.244)
N7: (63.375,112.100,15.342)
N9: (62.019,113.724,14.577)
O5': (64.220,115.898,16.581)
O3': (60.706,117.616,16.538)
OP2: (65.826,114.259,17.582)
C3': (61.394,116.487,16.021)
C1': (61.581,115.053,14.156)
C5': (63.861,117.126,15.905)
O4': (62.720,115.895,14.163)
C8: (63.232,113.383,15.131)
O2': (59.686,116.525,14.278)
C6: (61.699,110.241,14.861)
C5: (62.170,111.559,14.915)
C4: (61.319,112.551,14.462)
P: (65.668,115.687,17.214)
C4': (62.558,116.941,15.155)
C2': (60.525,115.696,15.053)
C2: (59.737,111.103,13.991)
N1: (60.450,110.041,14.388)
N3: (60.075,112.389,13.985)
N6: (62.417,109.183,15.244)
N7: (63.375,112.100,15.342)
N9: (62.019,113.724,14.577)
O5': (64.220,115.898,16.581)
O3': (60.706,117.616,16.538)
OP1: (73.453,106.452,23.934)
OP2: (73.503,108.914,23.195)
C3': (70.851,106.376,19.717)
C1': (68.869,107.660,19.846)
C5': (71.016,106.122,22.252)
O6: (68.751,113.651,19.545)
O4': (69.116,107.108,21.127)
C8: (70.129,109.733,20.602)
C2: (66.768,111.060,18.143)
C6: (68.384,112.496,19.294)
C5: (68.954,111.272,19.726)
C4: (68.371,110.090,19.327)
P: (72.727,107.683,23.516)
C4': (70.140,106.090,21.028)
C2': (69.712,106.870,18.840)
O2': (68.915,105.797,18.389)
N1: (67.270,112.286,18.490)
N2: (65.681,111.072,17.348)
N3: (67.290,109.909,18.542)
N7: (70.063,111.032,20.523)
N9: (69.121,109.098,19.914)
O5': (71.789,107.334,22.276)
O3': (71.440,105.173,19.229)
OP2: (73.503,108.914,23.195)
C3': (70.851,106.376,19.717)
C1': (68.869,107.660,19.846)
C5': (71.016,106.122,22.252)
O6: (68.751,113.651,19.545)
O4': (69.116,107.108,21.127)
C8: (70.129,109.733,20.602)
C2: (66.768,111.060,18.143)
C6: (68.384,112.496,19.294)
C5: (68.954,111.272,19.726)
C4: (68.371,110.090,19.327)
P: (72.727,107.683,23.516)
C4': (70.140,106.090,21.028)
C2': (69.712,106.870,18.840)
O2': (68.915,105.797,18.389)
N1: (67.270,112.286,18.490)
N2: (65.681,111.072,17.348)
N3: (67.290,109.909,18.542)
N7: (70.063,111.032,20.523)
N9: (69.121,109.098,19.914)
O5': (71.789,107.334,22.276)
O3': (71.440,105.173,19.229)
Image (generated by PyMOL):