Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2539:A2540
Extra
PDB:
ATOM 1 O3' G A2538 -72.192 -59.521 -36.791 1.00 0.01 O
ATOM 2 P U A2539 -72.002 -58.849 -35.379 1.00 0.01 P
ATOM 3 OP1 U A2539 -70.814 -57.990 -35.468 1.00 0.01 O
ATOM 4 OP2 U A2539 -72.030 -59.921 -34.384 1.00 0.01 O
ATOM 5 O5' U A2539 -73.303 -57.973 -35.255 1.00 0.01 O
ATOM 6 C5' U A2539 -73.316 -56.647 -35.734 1.00 0.01 C
ATOM 7 C4' U A2539 -74.699 -56.096 -35.746 1.00 0.01 C
ATOM 8 O4' U A2539 -75.621 -57.175 -35.962 1.00 0.01 O
ATOM 9 C3' U A2539 -75.158 -55.485 -34.450 1.00 0.01 C
ATOM 10 O3' U A2539 -74.701 -54.175 -34.268 1.00 0.01 O
ATOM 11 C2' U A2539 -76.669 -55.620 -34.518 1.00 0.01 C
ATOM 12 O2' U A2539 -77.250 -54.621 -35.321 1.00 0.01 O
ATOM 13 C1' U A2539 -76.810 -56.937 -35.241 1.00 0.01 C
ATOM 14 N1 U A2539 -77.044 -58.052 -34.315 1.00 0.01 N
ATOM 15 C2 U A2539 -78.338 -58.065 -33.900 1.00 0.01 C
ATOM 16 O2 U A2539 -79.114 -57.202 -34.276 1.00 0.01 O
ATOM 17 N3 U A2539 -78.639 -59.096 -33.072 1.00 0.01 N
ATOM 18 C4 U A2539 -77.790 -60.082 -32.634 1.00 0.01 C
ATOM 19 O4 U A2539 -78.232 -60.946 -31.871 1.00 0.01 O
ATOM 20 C5 U A2539 -76.447 -59.986 -33.124 1.00 0.01 C
ATOM 21 C6 U A2539 -76.122 -58.996 -33.945 1.00 0.01 C
ATOM 22 P A A2540 -73.993 -53.801 -32.892 1.00 0.20 P
ATOM 23 OP1 A A2540 -72.939 -54.816 -32.658 1.00 0.20 O
ATOM 24 OP2 A A2540 -75.059 -53.638 -31.885 1.00 0.20 O
ATOM 25 O5' A A2540 -73.322 -52.409 -33.191 1.00 0.20 O
TER
ATOM 1 O3' U B2539 -74.701 -54.175 -34.268 1.00 0.01 O
ATOM 2 P A B2540 -73.993 -53.801 -32.892 1.00 0.20 P
ATOM 3 OP1 A B2540 -72.939 -54.816 -32.658 1.00 0.20 O
ATOM 4 OP2 A B2540 -75.059 -53.638 -31.885 1.00 0.20 O
ATOM 5 O5' A B2540 -73.322 -52.409 -33.191 1.00 0.20 O
ATOM 6 C5' A B2540 -71.991 -52.388 -33.632 1.00 0.20 C
ATOM 7 C4' A B2540 -71.496 -51.006 -33.956 1.00 0.20 C
ATOM 8 O4' A B2540 -72.454 -50.255 -34.718 1.00 0.20 O
ATOM 9 C3' A B2540 -71.204 -50.085 -32.815 1.00 0.20 C
ATOM 10 O3' A B2540 -70.064 -50.467 -32.103 1.00 0.20 O
ATOM 11 C2' A B2540 -71.011 -48.805 -33.576 1.00 0.20 C
ATOM 12 O2' A B2540 -69.809 -48.878 -34.314 1.00 0.20 O
ATOM 13 C1' A B2540 -72.142 -48.896 -34.576 1.00 0.20 C
ATOM 14 N9 A B2540 -73.326 -48.181 -34.142 1.00 0.20 N
ATOM 15 C8 A B2540 -74.414 -48.683 -33.508 1.00 0.20 C
ATOM 16 N7 A B2540 -75.340 -47.778 -33.315 1.00 0.20 N
ATOM 17 C5 A B2540 -74.786 -46.628 -33.861 1.00 0.20 C
ATOM 18 C6 A B2540 -75.271 -45.342 -33.966 1.00 0.20 C
ATOM 19 N6 A B2540 -76.456 -45.013 -33.485 1.00 0.20 N
ATOM 20 N1 A B2540 -74.502 -44.433 -34.573 1.00 0.20 N
ATOM 21 C2 A B2540 -73.312 -44.797 -35.050 1.00 0.20 C
ATOM 22 N3 A B2540 -72.737 -45.980 -35.016 1.00 0.20 N
ATOM 23 C4 A B2540 -73.548 -46.859 -34.398 1.00 0.20 C
ATOM 24 P U B2541 -69.793 -49.841 -30.680 1.00 0.01 P
ATOM 25 OP1 U B2541 -68.861 -50.748 -29.994 1.00 0.01 O
ATOM 26 OP2 U B2541 -71.101 -49.555 -30.066 1.00 0.01 O
ATOM 27 O5' U B2541 -69.064 -48.499 -31.041 1.00 0.01 O
TER
ATOM 2 P U A2539 -72.002 -58.849 -35.379 1.00 0.01 P
ATOM 3 OP1 U A2539 -70.814 -57.990 -35.468 1.00 0.01 O
ATOM 4 OP2 U A2539 -72.030 -59.921 -34.384 1.00 0.01 O
ATOM 5 O5' U A2539 -73.303 -57.973 -35.255 1.00 0.01 O
ATOM 6 C5' U A2539 -73.316 -56.647 -35.734 1.00 0.01 C
ATOM 7 C4' U A2539 -74.699 -56.096 -35.746 1.00 0.01 C
ATOM 8 O4' U A2539 -75.621 -57.175 -35.962 1.00 0.01 O
ATOM 9 C3' U A2539 -75.158 -55.485 -34.450 1.00 0.01 C
ATOM 10 O3' U A2539 -74.701 -54.175 -34.268 1.00 0.01 O
ATOM 11 C2' U A2539 -76.669 -55.620 -34.518 1.00 0.01 C
ATOM 12 O2' U A2539 -77.250 -54.621 -35.321 1.00 0.01 O
ATOM 13 C1' U A2539 -76.810 -56.937 -35.241 1.00 0.01 C
ATOM 14 N1 U A2539 -77.044 -58.052 -34.315 1.00 0.01 N
ATOM 15 C2 U A2539 -78.338 -58.065 -33.900 1.00 0.01 C
ATOM 16 O2 U A2539 -79.114 -57.202 -34.276 1.00 0.01 O
ATOM 17 N3 U A2539 -78.639 -59.096 -33.072 1.00 0.01 N
ATOM 18 C4 U A2539 -77.790 -60.082 -32.634 1.00 0.01 C
ATOM 19 O4 U A2539 -78.232 -60.946 -31.871 1.00 0.01 O
ATOM 20 C5 U A2539 -76.447 -59.986 -33.124 1.00 0.01 C
ATOM 21 C6 U A2539 -76.122 -58.996 -33.945 1.00 0.01 C
ATOM 22 P A A2540 -73.993 -53.801 -32.892 1.00 0.20 P
ATOM 23 OP1 A A2540 -72.939 -54.816 -32.658 1.00 0.20 O
ATOM 24 OP2 A A2540 -75.059 -53.638 -31.885 1.00 0.20 O
ATOM 25 O5' A A2540 -73.322 -52.409 -33.191 1.00 0.20 O
TER
ATOM 1 O3' U B2539 -74.701 -54.175 -34.268 1.00 0.01 O
ATOM 2 P A B2540 -73.993 -53.801 -32.892 1.00 0.20 P
ATOM 3 OP1 A B2540 -72.939 -54.816 -32.658 1.00 0.20 O
ATOM 4 OP2 A B2540 -75.059 -53.638 -31.885 1.00 0.20 O
ATOM 5 O5' A B2540 -73.322 -52.409 -33.191 1.00 0.20 O
ATOM 6 C5' A B2540 -71.991 -52.388 -33.632 1.00 0.20 C
ATOM 7 C4' A B2540 -71.496 -51.006 -33.956 1.00 0.20 C
ATOM 8 O4' A B2540 -72.454 -50.255 -34.718 1.00 0.20 O
ATOM 9 C3' A B2540 -71.204 -50.085 -32.815 1.00 0.20 C
ATOM 10 O3' A B2540 -70.064 -50.467 -32.103 1.00 0.20 O
ATOM 11 C2' A B2540 -71.011 -48.805 -33.576 1.00 0.20 C
ATOM 12 O2' A B2540 -69.809 -48.878 -34.314 1.00 0.20 O
ATOM 13 C1' A B2540 -72.142 -48.896 -34.576 1.00 0.20 C
ATOM 14 N9 A B2540 -73.326 -48.181 -34.142 1.00 0.20 N
ATOM 15 C8 A B2540 -74.414 -48.683 -33.508 1.00 0.20 C
ATOM 16 N7 A B2540 -75.340 -47.778 -33.315 1.00 0.20 N
ATOM 17 C5 A B2540 -74.786 -46.628 -33.861 1.00 0.20 C
ATOM 18 C6 A B2540 -75.271 -45.342 -33.966 1.00 0.20 C
ATOM 19 N6 A B2540 -76.456 -45.013 -33.485 1.00 0.20 N
ATOM 20 N1 A B2540 -74.502 -44.433 -34.573 1.00 0.20 N
ATOM 21 C2 A B2540 -73.312 -44.797 -35.050 1.00 0.20 C
ATOM 22 N3 A B2540 -72.737 -45.980 -35.016 1.00 0.20 N
ATOM 23 C4 A B2540 -73.548 -46.859 -34.398 1.00 0.20 C
ATOM 24 P U B2541 -69.793 -49.841 -30.680 1.00 0.01 P
ATOM 25 OP1 U B2541 -68.861 -50.748 -29.994 1.00 0.01 O
ATOM 26 OP2 U B2541 -71.101 -49.555 -30.066 1.00 0.01 O
ATOM 27 O5' U B2541 -69.064 -48.499 -31.041 1.00 0.01 O
TER
Atoms:
C4: (-77.790,-60.082,-32.634)
N3: (-78.639,-59.096,-33.072)
OP1: (-70.814,-57.990,-35.468)
OP2: (-72.030,-59.921,-34.384)
C2: (-78.338,-58.065,-33.900)
C1': (-76.810,-56.937,-35.241)
C3': (-75.158,-55.485,-34.450)
O5': (-73.303,-57.973,-35.255)
O4': (-75.621,-57.175,-35.962)
C5': (-73.316,-56.647,-35.734)
P: (-72.002,-58.849,-35.379)
C4': (-74.699,-56.096,-35.746)
C2': (-76.669,-55.620,-34.518)
O2': (-77.250,-54.621,-35.321)
N1: (-77.044,-58.052,-34.315)
O4: (-78.232,-60.946,-31.871)
O2: (-79.114,-57.202,-34.276)
C6: (-76.122,-58.996,-33.945)
C5: (-76.447,-59.986,-33.124)
O3': (-74.701,-54.175,-34.268)
N3: (-78.639,-59.096,-33.072)
OP1: (-70.814,-57.990,-35.468)
OP2: (-72.030,-59.921,-34.384)
C2: (-78.338,-58.065,-33.900)
C1': (-76.810,-56.937,-35.241)
C3': (-75.158,-55.485,-34.450)
O5': (-73.303,-57.973,-35.255)
O4': (-75.621,-57.175,-35.962)
C5': (-73.316,-56.647,-35.734)
P: (-72.002,-58.849,-35.379)
C4': (-74.699,-56.096,-35.746)
C2': (-76.669,-55.620,-34.518)
O2': (-77.250,-54.621,-35.321)
N1: (-77.044,-58.052,-34.315)
O4: (-78.232,-60.946,-31.871)
O2: (-79.114,-57.202,-34.276)
C6: (-76.122,-58.996,-33.945)
C5: (-76.447,-59.986,-33.124)
O3': (-74.701,-54.175,-34.268)
OP1: (-72.939,-54.816,-32.658)
OP2: (-75.059,-53.638,-31.885)
C3': (-71.204,-50.085,-32.815)
C1': (-72.142,-48.896,-34.576)
C5': (-71.991,-52.388,-33.632)
O4': (-72.454,-50.255,-34.718)
C8: (-74.414,-48.683,-33.508)
O2': (-69.809,-48.878,-34.314)
C6: (-75.271,-45.342,-33.966)
C5: (-74.786,-46.628,-33.861)
C4: (-73.548,-46.859,-34.398)
P: (-73.993,-53.801,-32.892)
C4': (-71.496,-51.006,-33.956)
C2': (-71.011,-48.805,-33.576)
C2: (-73.312,-44.797,-35.050)
N1: (-74.502,-44.433,-34.573)
N3: (-72.737,-45.980,-35.016)
N6: (-76.456,-45.013,-33.485)
N7: (-75.340,-47.778,-33.315)
N9: (-73.326,-48.181,-34.142)
O5': (-73.322,-52.409,-33.191)
O3': (-70.064,-50.467,-32.103)
OP2: (-75.059,-53.638,-31.885)
C3': (-71.204,-50.085,-32.815)
C1': (-72.142,-48.896,-34.576)
C5': (-71.991,-52.388,-33.632)
O4': (-72.454,-50.255,-34.718)
C8: (-74.414,-48.683,-33.508)
O2': (-69.809,-48.878,-34.314)
C6: (-75.271,-45.342,-33.966)
C5: (-74.786,-46.628,-33.861)
C4: (-73.548,-46.859,-34.398)
P: (-73.993,-53.801,-32.892)
C4': (-71.496,-51.006,-33.956)
C2': (-71.011,-48.805,-33.576)
C2: (-73.312,-44.797,-35.050)
N1: (-74.502,-44.433,-34.573)
N3: (-72.737,-45.980,-35.016)
N6: (-76.456,-45.013,-33.485)
N7: (-75.340,-47.778,-33.315)
N9: (-73.326,-48.181,-34.142)
O5': (-73.322,-52.409,-33.191)
O3': (-70.064,-50.467,-32.103)
Image (generated by PyMOL):