Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2439:2440
Extra
PDB:
ATOM 1 O3' U A 438 -55.357 53.366 34.540 1.00 79.11 O
ATOM 2 P U A 439 -54.242 53.013 33.434 1.00 78.99 P
ATOM 3 OP1 U A 439 -54.755 53.495 32.131 1.00 80.26 O
ATOM 4 OP2 U A 439 -53.905 51.573 33.586 1.00 78.36 O
ATOM 5 O5' U A 439 -53.015 53.902 33.881 1.00 78.33 O
ATOM 6 C5' U A 439 -53.155 55.298 33.999 1.00 78.70 C
ATOM 7 C4' U A 439 -52.416 55.805 35.195 1.00 77.71 C
ATOM 8 O4' U A 439 -51.047 55.390 35.115 1.00 77.03 O
ATOM 9 C3' U A 439 -52.354 57.322 35.361 1.00 78.02 C
ATOM 10 O3' U A 439 -53.499 57.829 36.034 1.00 78.28 O
ATOM 11 C2' U A 439 -51.069 57.541 36.148 1.00 77.00 C
ATOM 12 O2' U A 439 -51.358 57.598 37.536 1.00 76.27 O
ATOM 13 C1' U A 439 -50.255 56.263 35.859 1.00 76.45 C
ATOM 14 N1 U A 439 -49.024 56.518 35.120 1.00 76.48 N
ATOM 15 C2 U A 439 -47.837 56.160 35.775 1.00 75.47 C
ATOM 16 O2 U A 439 -47.742 55.657 36.898 1.00 74.58 O
ATOM 17 N3 U A 439 -46.707 56.402 35.043 1.00 75.56 N
ATOM 18 C4 U A 439 -46.668 56.953 33.786 1.00 76.53 C
ATOM 19 O4 U A 439 -45.561 57.095 33.303 1.00 76.47 O
ATOM 20 C5 U A 439 -47.928 57.294 33.185 1.00 77.54 C
ATOM 21 C6 U A 439 -49.051 57.059 33.862 1.00 77.48 C
ATOM 22 P A A 440 -53.913 59.377 35.919 1.00 70.09 P
ATOM 23 OP1 A A 440 -52.818 60.084 35.205 1.00 70.27 O
ATOM 24 OP2 A A 440 -54.275 59.830 37.280 1.00 69.54 O
ATOM 25 O5' A A 440 -55.217 59.318 34.997 1.00 71.31 O
TER
ATOM 1 O3' U B 439 -53.499 57.829 36.034 1.00 78.28 O
ATOM 2 P A B 440 -53.913 59.377 35.919 1.00 70.09 P
ATOM 3 OP1 A B 440 -52.818 60.084 35.205 1.00 70.27 O
ATOM 4 OP2 A B 440 -54.275 59.830 37.280 1.00 69.54 O
ATOM 5 O5' A B 440 -55.217 59.318 34.997 1.00 71.31 O
ATOM 6 C5' A B 440 -55.120 59.413 33.572 1.00 72.26 C
ATOM 7 C4' A B 440 -56.480 59.558 32.912 1.00 73.45 C
ATOM 8 O4' A B 440 -57.318 58.408 33.225 1.00 73.29 O
ATOM 9 C3' A B 440 -57.311 60.754 33.342 1.00 74.00 C
ATOM 10 O3' A B 440 -56.977 61.926 32.623 1.00 74.74 O
ATOM 11 C2' A B 440 -58.727 60.273 33.077 1.00 74.78 C
ATOM 12 O2' A B 440 -58.991 60.284 31.684 1.00 75.91 O
ATOM 13 C1' A B 440 -58.631 58.827 33.512 1.00 73.94 C
ATOM 14 N9 A B 440 -58.848 58.670 34.962 1.00 73.02 N
ATOM 15 C8 A B 440 -57.879 58.222 35.839 1.00 71.77 C
ATOM 16 N7 A B 440 -58.253 58.159 37.089 1.00 71.14 N
ATOM 17 C5 A B 440 -59.580 58.593 37.058 1.00 72.02 C
ATOM 18 C6 A B 440 -60.539 58.766 38.095 1.00 71.95 C
ATOM 19 N6 A B 440 -60.293 58.487 39.390 1.00 70.92 N
ATOM 20 N1 A B 440 -61.770 59.224 37.737 1.00 73.03 N
ATOM 21 C2 A B 440 -61.980 59.485 36.442 1.00 74.07 C
ATOM 22 N3 A B 440 -61.165 59.383 35.391 1.00 74.26 N
ATOM 23 C4 A B 440 -59.962 58.915 35.752 1.00 73.19 C
ATOM 24 P C B 441 -56.998 63.363 33.336 1.00 78.57 P
ATOM 25 OP1 C B 441 -56.341 64.316 32.408 1.00 79.24 O
ATOM 26 OP2 C B 441 -56.432 63.173 34.706 1.00 77.27 O
ATOM 27 O5' C B 441 -58.549 63.704 33.447 1.00 79.46 O
TER
ATOM 2 P U A 439 -54.242 53.013 33.434 1.00 78.99 P
ATOM 3 OP1 U A 439 -54.755 53.495 32.131 1.00 80.26 O
ATOM 4 OP2 U A 439 -53.905 51.573 33.586 1.00 78.36 O
ATOM 5 O5' U A 439 -53.015 53.902 33.881 1.00 78.33 O
ATOM 6 C5' U A 439 -53.155 55.298 33.999 1.00 78.70 C
ATOM 7 C4' U A 439 -52.416 55.805 35.195 1.00 77.71 C
ATOM 8 O4' U A 439 -51.047 55.390 35.115 1.00 77.03 O
ATOM 9 C3' U A 439 -52.354 57.322 35.361 1.00 78.02 C
ATOM 10 O3' U A 439 -53.499 57.829 36.034 1.00 78.28 O
ATOM 11 C2' U A 439 -51.069 57.541 36.148 1.00 77.00 C
ATOM 12 O2' U A 439 -51.358 57.598 37.536 1.00 76.27 O
ATOM 13 C1' U A 439 -50.255 56.263 35.859 1.00 76.45 C
ATOM 14 N1 U A 439 -49.024 56.518 35.120 1.00 76.48 N
ATOM 15 C2 U A 439 -47.837 56.160 35.775 1.00 75.47 C
ATOM 16 O2 U A 439 -47.742 55.657 36.898 1.00 74.58 O
ATOM 17 N3 U A 439 -46.707 56.402 35.043 1.00 75.56 N
ATOM 18 C4 U A 439 -46.668 56.953 33.786 1.00 76.53 C
ATOM 19 O4 U A 439 -45.561 57.095 33.303 1.00 76.47 O
ATOM 20 C5 U A 439 -47.928 57.294 33.185 1.00 77.54 C
ATOM 21 C6 U A 439 -49.051 57.059 33.862 1.00 77.48 C
ATOM 22 P A A 440 -53.913 59.377 35.919 1.00 70.09 P
ATOM 23 OP1 A A 440 -52.818 60.084 35.205 1.00 70.27 O
ATOM 24 OP2 A A 440 -54.275 59.830 37.280 1.00 69.54 O
ATOM 25 O5' A A 440 -55.217 59.318 34.997 1.00 71.31 O
TER
ATOM 1 O3' U B 439 -53.499 57.829 36.034 1.00 78.28 O
ATOM 2 P A B 440 -53.913 59.377 35.919 1.00 70.09 P
ATOM 3 OP1 A B 440 -52.818 60.084 35.205 1.00 70.27 O
ATOM 4 OP2 A B 440 -54.275 59.830 37.280 1.00 69.54 O
ATOM 5 O5' A B 440 -55.217 59.318 34.997 1.00 71.31 O
ATOM 6 C5' A B 440 -55.120 59.413 33.572 1.00 72.26 C
ATOM 7 C4' A B 440 -56.480 59.558 32.912 1.00 73.45 C
ATOM 8 O4' A B 440 -57.318 58.408 33.225 1.00 73.29 O
ATOM 9 C3' A B 440 -57.311 60.754 33.342 1.00 74.00 C
ATOM 10 O3' A B 440 -56.977 61.926 32.623 1.00 74.74 O
ATOM 11 C2' A B 440 -58.727 60.273 33.077 1.00 74.78 C
ATOM 12 O2' A B 440 -58.991 60.284 31.684 1.00 75.91 O
ATOM 13 C1' A B 440 -58.631 58.827 33.512 1.00 73.94 C
ATOM 14 N9 A B 440 -58.848 58.670 34.962 1.00 73.02 N
ATOM 15 C8 A B 440 -57.879 58.222 35.839 1.00 71.77 C
ATOM 16 N7 A B 440 -58.253 58.159 37.089 1.00 71.14 N
ATOM 17 C5 A B 440 -59.580 58.593 37.058 1.00 72.02 C
ATOM 18 C6 A B 440 -60.539 58.766 38.095 1.00 71.95 C
ATOM 19 N6 A B 440 -60.293 58.487 39.390 1.00 70.92 N
ATOM 20 N1 A B 440 -61.770 59.224 37.737 1.00 73.03 N
ATOM 21 C2 A B 440 -61.980 59.485 36.442 1.00 74.07 C
ATOM 22 N3 A B 440 -61.165 59.383 35.391 1.00 74.26 N
ATOM 23 C4 A B 440 -59.962 58.915 35.752 1.00 73.19 C
ATOM 24 P C B 441 -56.998 63.363 33.336 1.00 78.57 P
ATOM 25 OP1 C B 441 -56.341 64.316 32.408 1.00 79.24 O
ATOM 26 OP2 C B 441 -56.432 63.173 34.706 1.00 77.27 O
ATOM 27 O5' C B 441 -58.549 63.704 33.447 1.00 79.46 O
TER
Atoms:
C4: (-46.668,56.953,33.786)
N3: (-46.707,56.402,35.043)
OP1: (-54.755,53.495,32.131)
OP2: (-53.905,51.573,33.586)
C2: (-47.837,56.160,35.775)
C1': (-50.255,56.263,35.859)
C3': (-52.354,57.322,35.361)
O5': (-53.015,53.902,33.881)
O4': (-51.047,55.390,35.115)
C5': (-53.155,55.298,33.999)
P: (-54.242,53.013,33.434)
C4': (-52.416,55.805,35.195)
C2': (-51.069,57.541,36.148)
O2': (-51.358,57.598,37.536)
N1: (-49.024,56.518,35.120)
O4: (-45.561,57.095,33.303)
O2: (-47.742,55.657,36.898)
C6: (-49.051,57.059,33.862)
C5: (-47.928,57.294,33.185)
O3': (-53.499,57.829,36.034)
N3: (-46.707,56.402,35.043)
OP1: (-54.755,53.495,32.131)
OP2: (-53.905,51.573,33.586)
C2: (-47.837,56.160,35.775)
C1': (-50.255,56.263,35.859)
C3': (-52.354,57.322,35.361)
O5': (-53.015,53.902,33.881)
O4': (-51.047,55.390,35.115)
C5': (-53.155,55.298,33.999)
P: (-54.242,53.013,33.434)
C4': (-52.416,55.805,35.195)
C2': (-51.069,57.541,36.148)
O2': (-51.358,57.598,37.536)
N1: (-49.024,56.518,35.120)
O4: (-45.561,57.095,33.303)
O2: (-47.742,55.657,36.898)
C6: (-49.051,57.059,33.862)
C5: (-47.928,57.294,33.185)
O3': (-53.499,57.829,36.034)
OP1: (-52.818,60.084,35.205)
OP2: (-54.275,59.830,37.280)
C3': (-57.311,60.754,33.342)
C1': (-58.631,58.827,33.512)
C5': (-55.120,59.413,33.572)
O4': (-57.318,58.408,33.225)
C8: (-57.879,58.222,35.839)
O2': (-58.991,60.284,31.684)
C6: (-60.539,58.766,38.095)
C5: (-59.580,58.593,37.058)
C4: (-59.962,58.915,35.752)
P: (-53.913,59.377,35.919)
C4': (-56.480,59.558,32.912)
C2': (-58.727,60.273,33.077)
C2: (-61.980,59.485,36.442)
N1: (-61.770,59.224,37.737)
N3: (-61.165,59.383,35.391)
N6: (-60.293,58.487,39.390)
N7: (-58.253,58.159,37.089)
N9: (-58.848,58.670,34.962)
O5': (-55.217,59.318,34.997)
O3': (-56.977,61.926,32.623)
OP2: (-54.275,59.830,37.280)
C3': (-57.311,60.754,33.342)
C1': (-58.631,58.827,33.512)
C5': (-55.120,59.413,33.572)
O4': (-57.318,58.408,33.225)
C8: (-57.879,58.222,35.839)
O2': (-58.991,60.284,31.684)
C6: (-60.539,58.766,38.095)
C5: (-59.580,58.593,37.058)
C4: (-59.962,58.915,35.752)
P: (-53.913,59.377,35.919)
C4': (-56.480,59.558,32.912)
C2': (-58.727,60.273,33.077)
C2: (-61.980,59.485,36.442)
N1: (-61.770,59.224,37.737)
N3: (-61.165,59.383,35.391)
N6: (-60.293,58.487,39.390)
N7: (-58.253,58.159,37.089)
N9: (-58.848,58.670,34.962)
O5': (-55.217,59.318,34.997)
O3': (-56.977,61.926,32.623)
Image (generated by PyMOL):