Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:S111:S108
Extra
PDB:
ATOM 1 O3' G A 110 -9.364 -56.809 88.503 1.00 55.25 O
ATOM 2 P A A 111 -10.428 -55.608 88.521 1.00 55.25 P
ATOM 3 OP1 A A 111 -11.413 -55.870 89.596 1.00 54.75 O
ATOM 4 OP2 A A 111 -10.912 -55.369 87.139 1.00 54.77 O
ATOM 5 O5' A A 111 -9.503 -54.382 88.971 1.00 55.45 O
ATOM 6 C5' A A 111 -9.013 -54.295 90.310 1.00 55.61 C
ATOM 7 C4' A A 111 -7.959 -53.208 90.431 1.00 55.83 C
ATOM 8 O4' A A 111 -6.846 -53.495 89.546 1.00 54.75 O
ATOM 9 C3' A A 111 -8.416 -51.813 90.030 1.00 56.37 C
ATOM 10 O3' A A 111 -9.092 -51.191 91.120 1.00 58.78 O
ATOM 11 C2' A A 111 -7.091 -51.139 89.676 1.00 55.18 C
ATOM 12 O2' A A 111 -6.406 -50.633 90.808 1.00 55.16 O
ATOM 13 C1' A A 111 -6.292 -52.289 89.056 1.00 53.62 C
ATOM 14 N9 A A 111 -6.316 -52.329 87.594 1.00 51.36 N
ATOM 15 C8 A A 111 -7.386 -52.637 86.800 1.00 50.84 C
ATOM 16 N7 A A 111 -7.133 -52.595 85.513 1.00 50.08 N
ATOM 17 C5 A A 111 -5.797 -52.241 85.454 1.00 49.47 C
ATOM 18 C6 A A 111 -4.918 -52.032 84.370 1.00 48.87 C
ATOM 19 N6 A A 111 -5.285 -52.160 83.091 1.00 48.73 N
ATOM 20 N1 A A 111 -3.642 -51.686 84.649 1.00 48.66 N
ATOM 21 C2 A A 111 -3.271 -51.559 85.931 1.00 48.65 C
ATOM 22 N3 A A 111 -4.007 -51.729 87.032 1.00 49.36 N
ATOM 23 C4 A A 111 -5.274 -52.073 86.727 1.00 50.09 C
ATOM 24 P C A 112 -10.415 -50.321 90.870 1.00 61.09 P
ATOM 25 OP1 C A 112 -10.858 -49.781 92.179 1.00 60.92 O
ATOM 26 OP2 C A 112 -11.364 -51.128 90.066 1.00 61.11 O
ATOM 27 O5' C A 112 -9.848 -49.102 90.000 1.00 61.53 O
TER
ATOM 1 O3' G B 107 -10.522 -57.522 74.820 1.00 69.38 O
ATOM 2 P G B 108 -9.849 -58.779 75.551 1.00 68.77 P
ATOM 3 OP1 G B 108 -8.856 -59.358 74.620 1.00 69.02 O
ATOM 4 OP2 G B 108 -10.919 -59.636 76.111 1.00 68.91 O
ATOM 5 O5' G B 108 -9.078 -58.114 76.783 1.00 68.08 O
ATOM 6 C5' G B 108 -7.947 -57.272 76.566 1.00 66.33 C
ATOM 7 C4' G B 108 -7.474 -56.654 77.869 1.00 64.98 C
ATOM 8 O4' G B 108 -8.515 -55.830 78.454 1.00 64.12 O
ATOM 9 C3' G B 108 -7.166 -57.635 78.987 1.00 64.51 C
ATOM 10 O3' G B 108 -5.939 -58.330 78.750 1.00 64.69 O
ATOM 11 C2' G B 108 -7.130 -56.679 80.176 1.00 63.89 C
ATOM 12 O2' G B 108 -5.929 -55.936 80.268 1.00 63.90 O
ATOM 13 C1' G B 108 -8.319 -55.768 79.858 1.00 63.17 C
ATOM 14 N9 G B 108 -9.533 -56.206 80.546 1.00 61.86 N
ATOM 15 C8 G B 108 -10.576 -56.923 80.009 1.00 61.59 C
ATOM 16 N7 G B 108 -11.523 -57.191 80.863 1.00 61.31 N
ATOM 17 C5 G B 108 -11.083 -56.620 82.048 1.00 60.92 C
ATOM 18 C6 G B 108 -11.695 -56.590 83.325 1.00 60.67 C
ATOM 19 O6 G B 108 -12.782 -57.078 83.659 1.00 60.64 O
ATOM 20 N1 G B 108 -10.921 -55.907 84.263 1.00 60.67 N
ATOM 21 C2 G B 108 -9.701 -55.329 83.992 1.00 60.80 C
ATOM 22 N2 G B 108 -9.094 -54.712 85.015 1.00 60.64 N
ATOM 23 N3 G B 108 -9.116 -55.353 82.798 1.00 60.96 N
ATOM 24 C4 G B 108 -9.859 -56.011 81.872 1.00 61.20 C
ATOM 25 P U B 109 -5.910 -59.937 78.762 1.00 64.96 P
ATOM 26 OP1 U B 109 -4.573 -60.354 78.278 1.00 64.68 O
ATOM 27 OP2 U B 109 -7.126 -60.433 78.069 1.00 64.73 O
ATOM 28 O5' U B 109 -6.017 -60.291 80.324 1.00 63.86 O
TER
ATOM 2 P A A 111 -10.428 -55.608 88.521 1.00 55.25 P
ATOM 3 OP1 A A 111 -11.413 -55.870 89.596 1.00 54.75 O
ATOM 4 OP2 A A 111 -10.912 -55.369 87.139 1.00 54.77 O
ATOM 5 O5' A A 111 -9.503 -54.382 88.971 1.00 55.45 O
ATOM 6 C5' A A 111 -9.013 -54.295 90.310 1.00 55.61 C
ATOM 7 C4' A A 111 -7.959 -53.208 90.431 1.00 55.83 C
ATOM 8 O4' A A 111 -6.846 -53.495 89.546 1.00 54.75 O
ATOM 9 C3' A A 111 -8.416 -51.813 90.030 1.00 56.37 C
ATOM 10 O3' A A 111 -9.092 -51.191 91.120 1.00 58.78 O
ATOM 11 C2' A A 111 -7.091 -51.139 89.676 1.00 55.18 C
ATOM 12 O2' A A 111 -6.406 -50.633 90.808 1.00 55.16 O
ATOM 13 C1' A A 111 -6.292 -52.289 89.056 1.00 53.62 C
ATOM 14 N9 A A 111 -6.316 -52.329 87.594 1.00 51.36 N
ATOM 15 C8 A A 111 -7.386 -52.637 86.800 1.00 50.84 C
ATOM 16 N7 A A 111 -7.133 -52.595 85.513 1.00 50.08 N
ATOM 17 C5 A A 111 -5.797 -52.241 85.454 1.00 49.47 C
ATOM 18 C6 A A 111 -4.918 -52.032 84.370 1.00 48.87 C
ATOM 19 N6 A A 111 -5.285 -52.160 83.091 1.00 48.73 N
ATOM 20 N1 A A 111 -3.642 -51.686 84.649 1.00 48.66 N
ATOM 21 C2 A A 111 -3.271 -51.559 85.931 1.00 48.65 C
ATOM 22 N3 A A 111 -4.007 -51.729 87.032 1.00 49.36 N
ATOM 23 C4 A A 111 -5.274 -52.073 86.727 1.00 50.09 C
ATOM 24 P C A 112 -10.415 -50.321 90.870 1.00 61.09 P
ATOM 25 OP1 C A 112 -10.858 -49.781 92.179 1.00 60.92 O
ATOM 26 OP2 C A 112 -11.364 -51.128 90.066 1.00 61.11 O
ATOM 27 O5' C A 112 -9.848 -49.102 90.000 1.00 61.53 O
TER
ATOM 1 O3' G B 107 -10.522 -57.522 74.820 1.00 69.38 O
ATOM 2 P G B 108 -9.849 -58.779 75.551 1.00 68.77 P
ATOM 3 OP1 G B 108 -8.856 -59.358 74.620 1.00 69.02 O
ATOM 4 OP2 G B 108 -10.919 -59.636 76.111 1.00 68.91 O
ATOM 5 O5' G B 108 -9.078 -58.114 76.783 1.00 68.08 O
ATOM 6 C5' G B 108 -7.947 -57.272 76.566 1.00 66.33 C
ATOM 7 C4' G B 108 -7.474 -56.654 77.869 1.00 64.98 C
ATOM 8 O4' G B 108 -8.515 -55.830 78.454 1.00 64.12 O
ATOM 9 C3' G B 108 -7.166 -57.635 78.987 1.00 64.51 C
ATOM 10 O3' G B 108 -5.939 -58.330 78.750 1.00 64.69 O
ATOM 11 C2' G B 108 -7.130 -56.679 80.176 1.00 63.89 C
ATOM 12 O2' G B 108 -5.929 -55.936 80.268 1.00 63.90 O
ATOM 13 C1' G B 108 -8.319 -55.768 79.858 1.00 63.17 C
ATOM 14 N9 G B 108 -9.533 -56.206 80.546 1.00 61.86 N
ATOM 15 C8 G B 108 -10.576 -56.923 80.009 1.00 61.59 C
ATOM 16 N7 G B 108 -11.523 -57.191 80.863 1.00 61.31 N
ATOM 17 C5 G B 108 -11.083 -56.620 82.048 1.00 60.92 C
ATOM 18 C6 G B 108 -11.695 -56.590 83.325 1.00 60.67 C
ATOM 19 O6 G B 108 -12.782 -57.078 83.659 1.00 60.64 O
ATOM 20 N1 G B 108 -10.921 -55.907 84.263 1.00 60.67 N
ATOM 21 C2 G B 108 -9.701 -55.329 83.992 1.00 60.80 C
ATOM 22 N2 G B 108 -9.094 -54.712 85.015 1.00 60.64 N
ATOM 23 N3 G B 108 -9.116 -55.353 82.798 1.00 60.96 N
ATOM 24 C4 G B 108 -9.859 -56.011 81.872 1.00 61.20 C
ATOM 25 P U B 109 -5.910 -59.937 78.762 1.00 64.96 P
ATOM 26 OP1 U B 109 -4.573 -60.354 78.278 1.00 64.68 O
ATOM 27 OP2 U B 109 -7.126 -60.433 78.069 1.00 64.73 O
ATOM 28 O5' U B 109 -6.017 -60.291 80.324 1.00 63.86 O
TER
Atoms:
OP1: (-11.413,-55.870,89.596)
OP2: (-10.912,-55.369,87.139)
C3': (-8.416,-51.813,90.030)
C1': (-6.292,-52.289,89.056)
C5': (-9.013,-54.295,90.310)
O4': (-6.846,-53.495,89.546)
C8: (-7.386,-52.637,86.800)
O2': (-6.406,-50.633,90.808)
C6: (-4.918,-52.032,84.370)
C5: (-5.797,-52.241,85.454)
C4: (-5.274,-52.073,86.727)
P: (-10.428,-55.608,88.521)
C4': (-7.959,-53.208,90.431)
C2': (-7.091,-51.139,89.676)
C2: (-3.271,-51.559,85.931)
N1: (-3.642,-51.686,84.649)
N3: (-4.007,-51.729,87.032)
N6: (-5.285,-52.160,83.091)
N7: (-7.133,-52.595,85.513)
N9: (-6.316,-52.329,87.594)
O5': (-9.503,-54.382,88.971)
O3': (-9.092,-51.191,91.120)
OP2: (-10.912,-55.369,87.139)
C3': (-8.416,-51.813,90.030)
C1': (-6.292,-52.289,89.056)
C5': (-9.013,-54.295,90.310)
O4': (-6.846,-53.495,89.546)
C8: (-7.386,-52.637,86.800)
O2': (-6.406,-50.633,90.808)
C6: (-4.918,-52.032,84.370)
C5: (-5.797,-52.241,85.454)
C4: (-5.274,-52.073,86.727)
P: (-10.428,-55.608,88.521)
C4': (-7.959,-53.208,90.431)
C2': (-7.091,-51.139,89.676)
C2: (-3.271,-51.559,85.931)
N1: (-3.642,-51.686,84.649)
N3: (-4.007,-51.729,87.032)
N6: (-5.285,-52.160,83.091)
N7: (-7.133,-52.595,85.513)
N9: (-6.316,-52.329,87.594)
O5': (-9.503,-54.382,88.971)
O3': (-9.092,-51.191,91.120)
OP1: (-8.856,-59.358,74.620)
OP2: (-10.919,-59.636,76.111)
C3': (-7.166,-57.635,78.987)
C1': (-8.319,-55.768,79.858)
C5': (-7.947,-57.272,76.566)
O6: (-12.782,-57.078,83.659)
O4': (-8.515,-55.830,78.454)
C8: (-10.576,-56.923,80.009)
C2: (-9.701,-55.329,83.992)
C6: (-11.695,-56.590,83.325)
C5: (-11.083,-56.620,82.048)
C4: (-9.859,-56.011,81.872)
P: (-9.849,-58.779,75.551)
C4': (-7.474,-56.654,77.869)
C2': (-7.130,-56.679,80.176)
O2': (-5.929,-55.936,80.268)
N1: (-10.921,-55.907,84.263)
N2: (-9.094,-54.712,85.015)
N3: (-9.116,-55.353,82.798)
N7: (-11.523,-57.191,80.863)
N9: (-9.533,-56.206,80.546)
O5': (-9.078,-58.114,76.783)
O3': (-5.939,-58.330,78.750)
OP2: (-10.919,-59.636,76.111)
C3': (-7.166,-57.635,78.987)
C1': (-8.319,-55.768,79.858)
C5': (-7.947,-57.272,76.566)
O6: (-12.782,-57.078,83.659)
O4': (-8.515,-55.830,78.454)
C8: (-10.576,-56.923,80.009)
C2: (-9.701,-55.329,83.992)
C6: (-11.695,-56.590,83.325)
C5: (-11.083,-56.620,82.048)
C4: (-9.859,-56.011,81.872)
P: (-9.849,-58.779,75.551)
C4': (-7.474,-56.654,77.869)
C2': (-7.130,-56.679,80.176)
O2': (-5.929,-55.936,80.268)
N1: (-10.921,-55.907,84.263)
N2: (-9.094,-54.712,85.015)
N3: (-9.116,-55.353,82.798)
N7: (-11.523,-57.191,80.863)
N9: (-9.533,-56.206,80.546)
O5': (-9.078,-58.114,76.783)
O3': (-5.939,-58.330,78.750)
Image (generated by PyMOL):