ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:0568:0565

Extra

PDB:
ATOM 1 O3' G A 567 6.500 93.498 135.464 1.00 50.35 O
ATOM 2 P A A 568 5.572 93.920 134.226 1.00 50.98 P
ATOM 3 OP1 A A 568 4.857 95.151 134.635 1.00 51.40 O
ATOM 4 OP2 A A 568 4.801 92.724 133.789 1.00 49.63 O
ATOM 5 O5' A A 568 6.592 94.321 133.065 1.00 53.21 O
ATOM 6 C5' A A 568 7.194 95.639 133.017 1.00 51.08 C
ATOM 7 C4' A A 568 8.312 95.672 131.995 1.00 50.83 C
ATOM 8 O4' A A 568 9.284 94.647 132.331 1.00 49.84 O
ATOM 9 C3' A A 568 7.930 95.347 130.556 1.00 51.09 C
ATOM 10 O3' A A 568 7.448 96.492 129.859 1.00 52.11 O
ATOM 11 C2' A A 568 9.266 94.914 129.975 1.00 50.91 C
ATOM 12 O2' A A 568 10.103 96.013 129.667 1.00 51.74 O
ATOM 13 C1' A A 568 9.867 94.139 131.147 1.00 49.60 C
ATOM 14 N9 A A 568 9.596 92.705 131.067 1.00 48.71 N
ATOM 15 C8 A A 568 8.396 92.054 131.216 1.00 48.71 C
ATOM 16 N7 A A 568 8.475 90.756 131.050 1.00 48.52 N
ATOM 17 C5 A A 568 9.818 90.535 130.779 1.00 46.84 C
ATOM 18 C6 A A 568 10.550 89.368 130.504 1.00 46.36 C
ATOM 19 N6 A A 568 10.013 88.148 130.449 1.00 47.18 N
ATOM 20 N1 A A 568 11.877 89.497 130.281 1.00 47.73 N
ATOM 21 C2 A A 568 12.420 90.718 130.333 1.00 46.65 C
ATOM 22 N3 A A 568 11.838 91.887 130.581 1.00 47.72 N
ATOM 23 C4 A A 568 10.521 91.726 130.796 1.00 47.75 C
ATOM 24 P G A 569 5.917 96.564 129.378 1.00 51.71 P
ATOM 25 OP1 G A 569 5.783 97.822 128.602 1.00 54.33 O
ATOM 26 OP2 G A 569 5.055 96.339 130.552 1.00 55.51 O
ATOM 27 O5' G A 569 5.684 95.307 128.422 1.00 52.18 O
TER

ATOM 1 O3' C B 564 2.152 80.475 133.712 1.00 61.19 O
ATOM 2 P G B 565 2.766 80.980 135.104 1.00 61.91 P
ATOM 3 OP1 G B 565 3.508 79.826 135.679 1.00 61.81 O
ATOM 4 OP2 G B 565 1.705 81.656 135.905 1.00 59.73 O
ATOM 5 O5' G B 565 3.805 82.106 134.670 1.00 60.95 O
ATOM 6 C5' G B 565 4.908 81.793 133.809 1.00 59.39 C
ATOM 7 C4' G B 565 5.734 83.025 133.549 1.00 58.75 C
ATOM 8 O4' G B 565 4.985 83.969 132.741 1.00 58.83 O
ATOM 9 C3' G B 565 6.100 83.844 134.770 1.00 58.83 C
ATOM 10 O3' G B 565 7.167 83.264 135.498 1.00 58.82 O
ATOM 11 C2' G B 565 6.480 85.176 134.140 1.00 59.97 C
ATOM 12 O2' G B 565 7.773 85.154 133.570 1.00 59.75 O
ATOM 13 C1' G B 565 5.433 85.285 133.027 1.00 59.23 C
ATOM 14 N9 G B 565 4.293 86.102 133.429 1.00 59.34 N
ATOM 15 C8 G B 565 3.092 85.679 133.944 1.00 59.91 C
ATOM 16 N7 G B 565 2.290 86.666 134.244 1.00 60.41 N
ATOM 17 C5 G B 565 3.002 87.805 133.900 1.00 59.46 C
ATOM 18 C6 G B 565 2.653 89.170 134.004 1.00 60.12 C
ATOM 19 O6 G B 565 1.607 89.668 134.436 1.00 60.21 O
ATOM 20 N1 G B 565 3.673 89.994 133.536 1.00 60.97 N
ATOM 21 C2 G B 565 4.872 89.559 133.033 1.00 60.61 C
ATOM 22 N2 G B 565 5.731 90.506 132.632 1.00 63.15 N
ATOM 23 N3 G B 565 5.208 88.290 132.932 1.00 60.01 N
ATOM 24 C4 G B 565 4.234 87.473 133.383 1.00 60.09 C
ATOM 25 P C B 566 7.056 83.131 137.095 1.00 58.21 P
ATOM 26 OP1 C B 566 8.230 82.354 137.553 1.00 58.62 O
ATOM 27 OP2 C B 566 5.686 82.658 137.417 1.00 60.26 O
ATOM 28 O5' C B 566 7.190 84.624 137.629 1.00 58.01 O
TER

Atoms:
OP1: (4.857,95.151,134.635)
OP2: (4.801,92.724,133.789)
C3': (7.930,95.347,130.556)
C1': (9.867,94.139,131.147)
C5': (7.194,95.639,133.017)
O4': (9.284,94.647,132.331)
C8: (8.396,92.054,131.216)
O2': (10.103,96.013,129.667)
C6: (10.550,89.368,130.504)
C5: (9.818,90.535,130.779)
C4: (10.521,91.726,130.796)
P: (5.572,93.920,134.226)
C4': (8.312,95.672,131.995)
C2': (9.266,94.914,129.975)
C2: (12.420,90.718,130.333)
N1: (11.877,89.497,130.281)
N3: (11.838,91.887,130.581)
N6: (10.013,88.148,130.449)
N7: (8.475,90.756,131.050)
N9: (9.596,92.705,131.067)
O5': (6.592,94.321,133.065)
O3': (7.448,96.492,129.859)
OP1: (3.508,79.826,135.679)
OP2: (1.705,81.656,135.905)
C3': (6.100,83.844,134.770)
C1': (5.433,85.285,133.027)
C5': (4.908,81.793,133.809)
O6: (1.607,89.668,134.436)
O4': (4.985,83.969,132.741)
C8: (3.092,85.679,133.944)
C2: (4.872,89.559,133.033)
C6: (2.653,89.170,134.004)
C5: (3.002,87.805,133.900)
C4: (4.234,87.473,133.383)
P: (2.766,80.980,135.104)
C4': (5.734,83.025,133.549)
C2': (6.480,85.176,134.140)
O2': (7.773,85.154,133.570)
N1: (3.673,89.994,133.536)
N2: (5.731,90.506,132.632)
N3: (5.208,88.290,132.932)
N7: (2.290,86.666,134.244)
N9: (4.293,86.102,133.429)
O5': (3.805,82.106,134.670)
O3': (7.167,83.264,135.498)
Image (generated by PyMOL):
PyMOL image
show in jmol