ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 301D:B14:B11

Extra

PDB:
ATOM 1 O3' A A 13 32.740 -8.852 8.764 1.00 46.83 O
ATOM 2 P A A 14 32.253 -9.193 10.252 1.00 46.54 P
ATOM 3 OP1 A A 14 30.993 -10.012 10.158 1.00 36.65 O
ATOM 4 OP2 A A 14 32.248 -7.906 10.982 1.00 32.81 O
ATOM 5 O5' A A 14 33.418 -10.128 10.783 1.00 38.47 O
ATOM 6 C5' A A 14 33.446 -11.488 10.372 1.00 39.21 C
ATOM 7 C4' A A 14 34.744 -12.116 10.768 1.00 39.67 C
ATOM 8 O4' A A 14 35.827 -11.343 10.213 1.00 35.69 O
ATOM 9 C3' A A 14 34.984 -12.126 12.252 1.00 42.83 C
ATOM 10 O3' A A 14 34.353 -13.323 12.762 1.00 45.38 O
ATOM 11 C2' A A 14 36.514 -12.116 12.339 1.00 43.24 C
ATOM 12 O2' A A 14 37.073 -13.406 12.248 1.00 55.92 O
ATOM 13 C1' A A 14 36.927 -11.380 11.063 1.00 32.59 C
ATOM 14 N9 A A 14 37.353 -10.012 11.209 1.00 29.18 N
ATOM 15 C8 A A 14 36.546 -8.957 11.468 1.00 36.26 C
ATOM 16 N7 A A 14 37.179 -7.812 11.516 1.00 39.65 N
ATOM 17 C5 A A 14 38.493 -8.152 11.277 1.00 33.36 C
ATOM 18 C6 A A 14 39.660 -7.389 11.202 1.00 38.19 C
ATOM 19 N6 A A 14 39.702 -6.075 11.404 1.00 41.36 N
ATOM 20 N1 A A 14 40.806 -8.027 10.919 1.00 40.60 N
ATOM 21 C2 A A 14 40.767 -9.346 10.747 1.00 43.15 C
ATOM 22 N3 A A 14 39.727 -10.176 10.813 1.00 42.25 N
ATOM 23 C4 A A 14 38.611 -9.504 11.084 1.00 31.57 C
ATOM 24 P G A 15 33.570 -13.283 14.174 1.00 46.55 P
ATOM 25 OP1 G A 15 34.442 -13.994 15.145 1.00 44.05 O
ATOM 26 OP2 G A 15 32.151 -13.745 13.993 1.00 35.11 O
ATOM 27 O5' G A 15 33.636 -11.734 14.547 1.00 33.54 O
TER

ATOM 1 O3' C B 10 36.987 3.955 12.528 1.00 64.35 O
ATOM 2 P G B 11 36.729 3.748 10.956 1.00 63.71 P
ATOM 3 OP1 G B 11 37.611 4.752 10.306 1.00 64.36 O
ATOM 4 OP2 G B 11 35.261 3.685 10.635 1.00 59.40 O
ATOM 5 O5' G B 11 37.250 2.279 10.672 1.00 63.63 O
ATOM 6 C5' G B 11 36.705 1.192 11.393 1.00 61.61 C
ATOM 7 C4' G B 11 37.482 -0.058 11.107 1.00 59.23 C
ATOM 8 O4' G B 11 37.134 -1.071 12.084 1.00 56.10 O
ATOM 9 C3' G B 11 37.190 -0.632 9.733 1.00 59.41 C
ATOM 10 O3' G B 11 38.184 -0.155 8.807 1.00 59.66 O
ATOM 11 C2' G B 11 37.294 -2.133 9.964 1.00 57.15 C
ATOM 12 O2' G B 11 38.634 -2.562 9.750 1.00 59.14 O
ATOM 13 C1' G B 11 36.824 -2.274 11.431 1.00 51.45 C
ATOM 14 N9 G B 11 35.388 -2.430 11.572 1.00 39.59 N
ATOM 15 C8 G B 11 34.477 -1.411 11.519 1.00 40.31 C
ATOM 16 N7 G B 11 33.244 -1.827 11.529 1.00 41.45 N
ATOM 17 C5 G B 11 33.350 -3.205 11.627 1.00 41.01 C
ATOM 18 C6 G B 11 32.341 -4.202 11.635 1.00 42.02 C
ATOM 19 O6 G B 11 31.121 -4.066 11.553 1.00 53.58 O
ATOM 20 N1 G B 11 32.874 -5.470 11.732 1.00 38.99 N
ATOM 21 C2 G B 11 34.205 -5.761 11.792 1.00 41.77 C
ATOM 22 N2 G B 11 34.505 -7.071 11.783 1.00 38.44 N
ATOM 23 N3 G B 11 35.173 -4.837 11.823 1.00 39.08 N
ATOM 24 C4 G B 11 34.670 -3.589 11.711 1.00 40.04 C
ATOM 25 P U B 12 37.816 0.008 7.252 1.00 56.27 P
ATOM 26 OP1 U B 12 38.905 -0.614 6.455 1.00 55.90 O
ATOM 27 OP2 U B 12 37.477 1.437 7.025 1.00 52.45 O
ATOM 28 O5' U B 12 36.513 -0.895 7.131 1.00 45.12 O
TER

Atoms:
OP1: (30.993,-10.012,10.158)
OP2: (32.248,-7.906,10.982)
C3': (34.984,-12.126,12.252)
C1': (36.927,-11.380,11.063)
C5': (33.446,-11.488,10.372)
O4': (35.827,-11.343,10.213)
C8: (36.546,-8.957,11.468)
O2': (37.073,-13.406,12.248)
C6: (39.660,-7.389,11.202)
C5: (38.493,-8.152,11.277)
C4: (38.611,-9.504,11.084)
P: (32.253,-9.193,10.252)
C4': (34.744,-12.116,10.768)
C2': (36.514,-12.116,12.339)
C2: (40.767,-9.346,10.747)
N1: (40.806,-8.027,10.919)
N3: (39.727,-10.176,10.813)
N6: (39.702,-6.075,11.404)
N7: (37.179,-7.812,11.516)
N9: (37.353,-10.012,11.209)
O5': (33.418,-10.128,10.783)
O3': (34.353,-13.323,12.762)
OP1: (37.611,4.752,10.306)
OP2: (35.261,3.685,10.635)
C3': (37.190,-0.632,9.733)
C1': (36.824,-2.274,11.431)
C5': (36.705,1.192,11.393)
O6: (31.121,-4.066,11.553)
O4': (37.134,-1.071,12.084)
C8: (34.477,-1.411,11.519)
C2: (34.205,-5.761,11.792)
C6: (32.341,-4.202,11.635)
C5: (33.350,-3.205,11.627)
C4: (34.670,-3.589,11.711)
P: (36.729,3.748,10.956)
C4': (37.482,-0.058,11.107)
C2': (37.294,-2.133,9.964)
O2': (38.634,-2.562,9.750)
N1: (32.874,-5.470,11.732)
N2: (34.505,-7.071,11.783)
N3: (35.173,-4.837,11.823)
N7: (33.244,-1.827,11.529)
N9: (35.388,-2.430,11.572)
O5': (37.250,2.279,10.672)
O3': (38.184,-0.155,8.807)
Image (generated by PyMOL):
PyMOL image
show in jmol