Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21282:21279
Extra
PDB:
ATOM 1 O3' G A1281 -85.696 -2.455 76.132 1.00 71.15 O
ATOM 2 P A A1282 -86.224 -3.974 76.033 1.00 78.27 P
ATOM 3 OP1 A A1282 -87.189 -4.028 74.915 1.00 78.76 O
ATOM 4 OP2 A A1282 -86.678 -4.372 77.390 1.00 78.58 O
ATOM 5 O5' A A1282 -84.924 -4.773 75.627 1.00 77.53 O
ATOM 6 C5' A A1282 -84.241 -4.459 74.424 1.00 77.12 C
ATOM 7 C4' A A1282 -82.867 -5.053 74.421 1.00 76.39 C
ATOM 8 O4' A A1282 -82.062 -4.388 75.423 1.00 76.02 O
ATOM 9 C3' A A1282 -82.801 -6.510 74.810 1.00 76.36 C
ATOM 10 O3' A A1282 -83.108 -7.385 73.748 1.00 76.48 O
ATOM 11 C2' A A1282 -81.394 -6.663 75.355 1.00 75.67 C
ATOM 12 O2' A A1282 -80.464 -6.802 74.289 1.00 75.17 O
ATOM 13 C1' A A1282 -81.186 -5.299 76.026 1.00 75.60 C
ATOM 14 N9 A A1282 -81.486 -5.317 77.463 1.00 75.83 N
ATOM 15 C8 A A1282 -82.696 -5.429 78.047 1.00 76.48 C
ATOM 16 N7 A A1282 -82.656 -5.404 79.355 1.00 76.56 N
ATOM 17 C5 A A1282 -81.327 -5.236 79.661 1.00 75.91 C
ATOM 18 C6 A A1282 -80.620 -5.120 80.872 1.00 75.66 C
ATOM 19 N6 A A1282 -81.155 -5.153 82.085 1.00 76.05 N
ATOM 20 N1 A A1282 -79.286 -4.959 80.813 1.00 75.00 N
ATOM 21 C2 A A1282 -78.716 -4.912 79.613 1.00 74.63 C
ATOM 22 N3 A A1282 -79.277 -5.010 78.405 1.00 74.81 N
ATOM 23 C4 A A1282 -80.604 -5.172 78.495 1.00 75.46 C
ATOM 24 P U A1283 -83.825 -8.762 74.097 1.00 78.15 P
ATOM 25 OP1 U A1283 -83.178 -9.805 73.305 1.00 77.79 O
ATOM 26 OP2 U A1283 -85.281 -8.553 73.949 1.00 78.91 O
ATOM 27 O5' U A1283 -83.457 -8.920 75.625 1.00 78.04 O
TER
ATOM 1 O3' A B1278 -89.946 -3.827 89.156 1.00 81.53 O
ATOM 2 P G B1279 -90.034 -2.332 88.590 1.00 79.96 P
ATOM 3 OP1 G B1279 -89.696 -1.409 89.724 1.00 79.92 O
ATOM 4 OP2 G B1279 -91.346 -2.197 87.903 1.00 80.65 O
ATOM 5 O5' G B1279 -88.884 -2.302 87.505 1.00 79.13 O
ATOM 6 C5' G B1279 -87.533 -2.471 87.866 1.00 78.41 C
ATOM 7 C4' G B1279 -86.688 -2.659 86.651 1.00 77.76 C
ATOM 8 O4' G B1279 -87.096 -3.853 85.945 1.00 77.92 O
ATOM 9 C3' G B1279 -86.812 -1.598 85.586 1.00 77.69 C
ATOM 10 O3' G B1279 -86.182 -0.380 85.927 1.00 77.38 O
ATOM 11 C2' G B1279 -86.193 -2.309 84.389 1.00 77.21 C
ATOM 12 O2' G B1279 -84.785 -2.388 84.502 1.00 76.45 O
ATOM 13 C1' G B1279 -86.756 -3.710 84.575 1.00 77.55 C
ATOM 14 N9 G B1279 -87.943 -3.881 83.752 1.00 78.13 N
ATOM 15 C8 G B1279 -89.252 -3.735 84.047 1.00 78.92 C
ATOM 16 N7 G B1279 -89.970 -3.897 82.975 1.00 79.22 N
ATOM 17 C5 G B1279 -89.069 -4.120 81.943 1.00 78.59 C
ATOM 18 C6 G B1279 -89.249 -4.354 80.556 1.00 78.57 C
ATOM 19 O6 G B1279 -90.310 -4.413 79.919 1.00 79.14 O
ATOM 20 N1 G B1279 -88.036 -4.530 79.895 1.00 77.81 N
ATOM 21 C2 G B1279 -86.816 -4.470 80.501 1.00 77.17 C
ATOM 22 N2 G B1279 -85.746 -4.645 79.704 1.00 76.52 N
ATOM 23 N3 G B1279 -86.651 -4.253 81.790 1.00 77.20 N
ATOM 24 C4 G B1279 -87.811 -4.090 82.424 1.00 77.91 C
ATOM 25 P U B1280 -86.979 1.013 85.801 1.00 74.14 P
ATOM 26 OP1 U B1280 -86.061 2.088 86.258 1.00 73.69 O
ATOM 27 OP2 U B1280 -88.251 0.837 86.511 1.00 74.95 O
ATOM 28 O5' U B1280 -87.231 1.156 84.223 1.00 74.13 O
TER
ATOM 2 P A A1282 -86.224 -3.974 76.033 1.00 78.27 P
ATOM 3 OP1 A A1282 -87.189 -4.028 74.915 1.00 78.76 O
ATOM 4 OP2 A A1282 -86.678 -4.372 77.390 1.00 78.58 O
ATOM 5 O5' A A1282 -84.924 -4.773 75.627 1.00 77.53 O
ATOM 6 C5' A A1282 -84.241 -4.459 74.424 1.00 77.12 C
ATOM 7 C4' A A1282 -82.867 -5.053 74.421 1.00 76.39 C
ATOM 8 O4' A A1282 -82.062 -4.388 75.423 1.00 76.02 O
ATOM 9 C3' A A1282 -82.801 -6.510 74.810 1.00 76.36 C
ATOM 10 O3' A A1282 -83.108 -7.385 73.748 1.00 76.48 O
ATOM 11 C2' A A1282 -81.394 -6.663 75.355 1.00 75.67 C
ATOM 12 O2' A A1282 -80.464 -6.802 74.289 1.00 75.17 O
ATOM 13 C1' A A1282 -81.186 -5.299 76.026 1.00 75.60 C
ATOM 14 N9 A A1282 -81.486 -5.317 77.463 1.00 75.83 N
ATOM 15 C8 A A1282 -82.696 -5.429 78.047 1.00 76.48 C
ATOM 16 N7 A A1282 -82.656 -5.404 79.355 1.00 76.56 N
ATOM 17 C5 A A1282 -81.327 -5.236 79.661 1.00 75.91 C
ATOM 18 C6 A A1282 -80.620 -5.120 80.872 1.00 75.66 C
ATOM 19 N6 A A1282 -81.155 -5.153 82.085 1.00 76.05 N
ATOM 20 N1 A A1282 -79.286 -4.959 80.813 1.00 75.00 N
ATOM 21 C2 A A1282 -78.716 -4.912 79.613 1.00 74.63 C
ATOM 22 N3 A A1282 -79.277 -5.010 78.405 1.00 74.81 N
ATOM 23 C4 A A1282 -80.604 -5.172 78.495 1.00 75.46 C
ATOM 24 P U A1283 -83.825 -8.762 74.097 1.00 78.15 P
ATOM 25 OP1 U A1283 -83.178 -9.805 73.305 1.00 77.79 O
ATOM 26 OP2 U A1283 -85.281 -8.553 73.949 1.00 78.91 O
ATOM 27 O5' U A1283 -83.457 -8.920 75.625 1.00 78.04 O
TER
ATOM 1 O3' A B1278 -89.946 -3.827 89.156 1.00 81.53 O
ATOM 2 P G B1279 -90.034 -2.332 88.590 1.00 79.96 P
ATOM 3 OP1 G B1279 -89.696 -1.409 89.724 1.00 79.92 O
ATOM 4 OP2 G B1279 -91.346 -2.197 87.903 1.00 80.65 O
ATOM 5 O5' G B1279 -88.884 -2.302 87.505 1.00 79.13 O
ATOM 6 C5' G B1279 -87.533 -2.471 87.866 1.00 78.41 C
ATOM 7 C4' G B1279 -86.688 -2.659 86.651 1.00 77.76 C
ATOM 8 O4' G B1279 -87.096 -3.853 85.945 1.00 77.92 O
ATOM 9 C3' G B1279 -86.812 -1.598 85.586 1.00 77.69 C
ATOM 10 O3' G B1279 -86.182 -0.380 85.927 1.00 77.38 O
ATOM 11 C2' G B1279 -86.193 -2.309 84.389 1.00 77.21 C
ATOM 12 O2' G B1279 -84.785 -2.388 84.502 1.00 76.45 O
ATOM 13 C1' G B1279 -86.756 -3.710 84.575 1.00 77.55 C
ATOM 14 N9 G B1279 -87.943 -3.881 83.752 1.00 78.13 N
ATOM 15 C8 G B1279 -89.252 -3.735 84.047 1.00 78.92 C
ATOM 16 N7 G B1279 -89.970 -3.897 82.975 1.00 79.22 N
ATOM 17 C5 G B1279 -89.069 -4.120 81.943 1.00 78.59 C
ATOM 18 C6 G B1279 -89.249 -4.354 80.556 1.00 78.57 C
ATOM 19 O6 G B1279 -90.310 -4.413 79.919 1.00 79.14 O
ATOM 20 N1 G B1279 -88.036 -4.530 79.895 1.00 77.81 N
ATOM 21 C2 G B1279 -86.816 -4.470 80.501 1.00 77.17 C
ATOM 22 N2 G B1279 -85.746 -4.645 79.704 1.00 76.52 N
ATOM 23 N3 G B1279 -86.651 -4.253 81.790 1.00 77.20 N
ATOM 24 C4 G B1279 -87.811 -4.090 82.424 1.00 77.91 C
ATOM 25 P U B1280 -86.979 1.013 85.801 1.00 74.14 P
ATOM 26 OP1 U B1280 -86.061 2.088 86.258 1.00 73.69 O
ATOM 27 OP2 U B1280 -88.251 0.837 86.511 1.00 74.95 O
ATOM 28 O5' U B1280 -87.231 1.156 84.223 1.00 74.13 O
TER
Atoms:
OP1: (-87.189,-4.028,74.915)
OP2: (-86.678,-4.372,77.390)
C3': (-82.801,-6.510,74.810)
C1': (-81.186,-5.299,76.026)
C5': (-84.241,-4.459,74.424)
O4': (-82.062,-4.388,75.423)
C8: (-82.696,-5.429,78.047)
O2': (-80.464,-6.802,74.289)
C6: (-80.620,-5.120,80.872)
C5: (-81.327,-5.236,79.661)
C4: (-80.604,-5.172,78.495)
P: (-86.224,-3.974,76.033)
C4': (-82.867,-5.053,74.421)
C2': (-81.394,-6.663,75.355)
C2: (-78.716,-4.912,79.613)
N1: (-79.286,-4.959,80.813)
N3: (-79.277,-5.010,78.405)
N6: (-81.155,-5.153,82.085)
N7: (-82.656,-5.404,79.355)
N9: (-81.486,-5.317,77.463)
O5': (-84.924,-4.773,75.627)
O3': (-83.108,-7.385,73.748)
OP2: (-86.678,-4.372,77.390)
C3': (-82.801,-6.510,74.810)
C1': (-81.186,-5.299,76.026)
C5': (-84.241,-4.459,74.424)
O4': (-82.062,-4.388,75.423)
C8: (-82.696,-5.429,78.047)
O2': (-80.464,-6.802,74.289)
C6: (-80.620,-5.120,80.872)
C5: (-81.327,-5.236,79.661)
C4: (-80.604,-5.172,78.495)
P: (-86.224,-3.974,76.033)
C4': (-82.867,-5.053,74.421)
C2': (-81.394,-6.663,75.355)
C2: (-78.716,-4.912,79.613)
N1: (-79.286,-4.959,80.813)
N3: (-79.277,-5.010,78.405)
N6: (-81.155,-5.153,82.085)
N7: (-82.656,-5.404,79.355)
N9: (-81.486,-5.317,77.463)
O5': (-84.924,-4.773,75.627)
O3': (-83.108,-7.385,73.748)
OP1: (-89.696,-1.409,89.724)
OP2: (-91.346,-2.197,87.903)
C3': (-86.812,-1.598,85.586)
C1': (-86.756,-3.710,84.575)
C5': (-87.533,-2.471,87.866)
O6: (-90.310,-4.413,79.919)
O4': (-87.096,-3.853,85.945)
C8: (-89.252,-3.735,84.047)
C2: (-86.816,-4.470,80.501)
C6: (-89.249,-4.354,80.556)
C5: (-89.069,-4.120,81.943)
C4: (-87.811,-4.090,82.424)
P: (-90.034,-2.332,88.590)
C4': (-86.688,-2.659,86.651)
C2': (-86.193,-2.309,84.389)
O2': (-84.785,-2.388,84.502)
N1: (-88.036,-4.530,79.895)
N2: (-85.746,-4.645,79.704)
N3: (-86.651,-4.253,81.790)
N7: (-89.970,-3.897,82.975)
N9: (-87.943,-3.881,83.752)
O5': (-88.884,-2.302,87.505)
O3': (-86.182,-0.380,85.927)
OP2: (-91.346,-2.197,87.903)
C3': (-86.812,-1.598,85.586)
C1': (-86.756,-3.710,84.575)
C5': (-87.533,-2.471,87.866)
O6: (-90.310,-4.413,79.919)
O4': (-87.096,-3.853,85.945)
C8: (-89.252,-3.735,84.047)
C2: (-86.816,-4.470,80.501)
C6: (-89.249,-4.354,80.556)
C5: (-89.069,-4.120,81.943)
C4: (-87.811,-4.090,82.424)
P: (-90.034,-2.332,88.590)
C4': (-86.688,-2.659,86.651)
C2': (-86.193,-2.309,84.389)
O2': (-84.785,-2.388,84.502)
N1: (-88.036,-4.530,79.895)
N2: (-85.746,-4.645,79.704)
N3: (-86.651,-4.253,81.790)
N7: (-89.970,-3.897,82.975)
N9: (-87.943,-3.881,83.752)
O5': (-88.884,-2.302,87.505)
O3': (-86.182,-0.380,85.927)
Image (generated by PyMOL):