ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QWY:B39:B41

Extra

PDB:
ATOM 1 O3' G A 38 2.688 10.452 18.636 1.00 87.60 O
ATOM 2 P U A 39 1.613 10.740 17.474 1.00 88.74 P
ATOM 3 OP1 U A 39 0.261 10.358 17.977 1.00 87.64 O
ATOM 4 OP2 U A 39 2.153 10.101 16.246 1.00 88.37 O
ATOM 5 O5' U A 39 1.646 12.324 17.273 1.00 87.55 O
ATOM 6 C5' U A 39 0.919 13.196 18.146 1.00 86.34 C
ATOM 7 C4' U A 39 0.733 14.555 17.503 1.00 84.94 C
ATOM 8 O4' U A 39 1.698 15.501 18.037 1.00 82.31 O
ATOM 9 C3' U A 39 0.893 14.605 15.985 1.00 85.43 C
ATOM 10 O3' U A 39 -0.116 15.438 15.448 1.00 90.12 O
ATOM 11 C2' U A 39 2.248 15.272 15.797 1.00 82.64 C
ATOM 12 O2' U A 39 2.361 15.966 14.569 1.00 80.34 O
ATOM 13 C1' U A 39 2.250 16.239 16.974 1.00 80.29 C
ATOM 14 N1 U A 39 3.592 16.675 17.364 1.00 77.74 N
ATOM 15 C2 U A 39 3.815 18.027 17.440 1.00 76.37 C
ATOM 16 O2 U A 39 2.945 18.846 17.226 1.00 75.50 O
ATOM 17 N3 U A 39 5.092 18.384 17.778 1.00 75.78 N
ATOM 18 C4 U A 39 6.145 17.536 18.044 1.00 76.60 C
ATOM 19 O4 U A 39 7.260 18.008 18.270 1.00 76.78 O
ATOM 20 C5 U A 39 5.824 16.146 17.961 1.00 76.69 C
ATOM 21 C6 U A 39 4.588 15.774 17.632 1.00 76.62 C
ATOM 22 P A A 40 -1.384 14.778 14.732 1.00 93.02 P
ATOM 23 OP1 A A 40 -1.786 13.583 15.518 1.00 92.58 O
ATOM 24 OP2 A A 40 -1.052 14.636 13.293 1.00 93.42 O
ATOM 25 O5' A A 40 -2.504 15.892 14.882 1.00 94.43 O
TER

ATOM 1 O3' A B 40 -3.853 19.293 12.295 1.00 96.50 O
ATOM 2 P G B 41 -2.673 19.182 11.212 1.00 94.24 P
ATOM 3 OP1 G B 41 -3.265 18.957 9.870 1.00 95.12 O
ATOM 4 OP2 G B 41 -1.663 18.220 11.733 1.00 93.59 O
ATOM 5 O5' G B 41 -2.028 20.638 11.239 1.00 91.69 O
ATOM 6 C5' G B 41 -1.297 21.089 12.377 1.00 86.38 C
ATOM 7 C4' G B 41 -1.773 22.460 12.811 1.00 81.63 C
ATOM 8 O4' G B 41 -1.631 22.555 14.259 1.00 80.15 O
ATOM 9 C3' G B 41 -0.963 23.625 12.241 1.00 78.98 C
ATOM 10 O3' G B 41 -1.642 24.238 11.153 1.00 75.65 O
ATOM 11 C2' G B 41 -0.855 24.575 13.428 1.00 78.62 C
ATOM 12 O2' G B 41 -2.017 25.361 13.596 1.00 78.37 O
ATOM 13 C1' G B 41 -0.711 23.581 14.575 1.00 78.46 C
ATOM 14 N9 G B 41 0.627 22.994 14.628 1.00 77.67 N
ATOM 15 C8 G B 41 0.963 21.675 14.437 1.00 77.01 C
ATOM 16 N7 G B 41 2.248 21.457 14.511 1.00 76.62 N
ATOM 17 C5 G B 41 2.795 22.705 14.778 1.00 76.45 C
ATOM 18 C6 G B 41 4.147 23.096 14.967 1.00 74.67 C
ATOM 19 O6 G B 41 5.159 22.401 14.926 1.00 73.56 O
ATOM 20 N1 G B 41 4.255 24.455 15.223 1.00 74.74 N
ATOM 21 C2 G B 41 3.201 25.332 15.287 1.00 76.26 C
ATOM 22 N2 G B 41 3.508 26.613 15.545 1.00 76.47 N
ATOM 23 N3 G B 41 1.936 24.983 15.111 1.00 77.22 N
ATOM 24 C4 G B 41 1.808 23.664 14.862 1.00 77.32 C
ATOM 25 P C B 42 -0.826 25.160 10.121 1.00 73.97 P
ATOM 26 OP1 C B 42 -1.840 25.894 9.323 1.00 73.99 O
ATOM 27 OP2 C B 42 0.183 24.313 9.425 1.00 71.15 O
ATOM 28 O5' C B 42 -0.071 26.213 11.050 1.00 70.50 O
TER

Atoms:
C4: (6.145,17.536,18.044)
N3: (5.092,18.384,17.778)
OP1: (0.261,10.358,17.977)
OP2: (2.153,10.101,16.246)
C2: (3.815,18.027,17.440)
C1': (2.250,16.239,16.974)
C3': (0.893,14.605,15.985)
O5': (1.646,12.324,17.273)
O4': (1.698,15.501,18.037)
C5': (0.919,13.196,18.146)
P: (1.613,10.740,17.474)
C4': (0.733,14.555,17.503)
C2': (2.248,15.272,15.797)
O2': (2.361,15.966,14.569)
N1: (3.592,16.675,17.364)
O4: (7.260,18.008,18.270)
O2: (2.945,18.846,17.226)
C6: (4.588,15.774,17.632)
C5: (5.824,16.146,17.961)
O3': (-0.116,15.438,15.448)
OP1: (-3.265,18.957,9.870)
OP2: (-1.663,18.220,11.733)
C3': (-0.963,23.625,12.241)
C1': (-0.711,23.581,14.575)
C5': (-1.297,21.089,12.377)
O6: (5.159,22.401,14.926)
O4': (-1.631,22.555,14.259)
C8: (0.963,21.675,14.437)
C2: (3.201,25.332,15.287)
C6: (4.147,23.096,14.967)
C5: (2.795,22.705,14.778)
C4: (1.808,23.664,14.862)
P: (-2.673,19.182,11.212)
C4': (-1.773,22.460,12.811)
C2': (-0.855,24.575,13.428)
O2': (-2.017,25.361,13.596)
N1: (4.255,24.455,15.223)
N2: (3.508,26.613,15.545)
N3: (1.936,24.983,15.111)
N7: (2.248,21.457,14.511)
N9: (0.627,22.994,14.628)
O5': (-2.028,20.638,11.239)
O3': (-1.642,24.238,11.153)
Image (generated by PyMOL):
PyMOL image
show in jmol