Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A19:A56
Extra
PDB:
ATOM 1 O3' G A 18 -1.854 9.230 19.117 1.00 26.41 O
ATOM 2 P U A 19 -2.536 10.610 18.660 1.00 31.24 P
ATOM 3 OP1 U A 19 -2.859 11.357 19.900 1.00 28.66 O
ATOM 4 OP2 U A 19 -3.634 10.268 17.723 1.00 29.07 O
ATOM 5 O5' U A 19 -1.360 11.342 17.873 1.00 21.92 O
ATOM 6 C5' U A 19 -0.130 11.630 18.517 1.00 22.40 C
ATOM 7 C4' U A 19 0.901 12.134 17.543 1.00 20.75 C
ATOM 8 O4' U A 19 1.340 11.055 16.677 1.00 21.37 O
ATOM 9 C3' U A 19 0.438 13.205 16.576 1.00 23.60 C
ATOM 10 O3' U A 19 0.381 14.490 17.167 1.00 29.19 O
ATOM 11 C2' U A 19 1.463 13.085 15.457 1.00 24.63 C
ATOM 12 O2' U A 19 2.692 13.679 15.844 1.00 26.91 O
ATOM 13 C1' U A 19 1.665 11.571 15.403 1.00 21.55 C
ATOM 14 N1 U A 19 0.796 10.924 14.398 1.00 20.17 N
ATOM 15 C2 U A 19 1.294 10.775 13.119 1.00 19.33 C
ATOM 16 O2 U A 19 2.398 11.157 12.787 1.00 22.00 O
ATOM 17 N3 U A 19 0.453 10.161 12.228 1.00 23.54 N
ATOM 18 C4 U A 19 -0.813 9.678 12.486 1.00 24.83 C
ATOM 19 O4 U A 19 -1.446 9.143 11.573 1.00 25.17 O
ATOM 20 C5 U A 19 -1.260 9.867 13.834 1.00 24.78 C
ATOM 21 C6 U A 19 -0.459 10.463 14.726 1.00 22.32 C
ATOM 22 P U A 20 -0.770 15.528 16.741 1.00 33.11 P
ATOM 23 OP1 U A 20 -1.669 14.821 15.793 1.00 29.70 O
ATOM 24 OP2 U A 20 -0.090 16.766 16.294 1.00 31.22 O
ATOM 25 O5' U A 20 -1.538 15.795 18.111 1.00 36.72 O
TER
ATOM 1 O3' A B 55 6.283 14.869 13.757 1.00 28.83 O
ATOM 2 P G B 56 5.371 15.825 14.664 1.00 29.68 P
ATOM 3 OP1 G B 56 5.919 15.780 16.039 1.00 28.64 O
ATOM 4 OP2 G B 56 3.961 15.420 14.441 1.00 28.96 O
ATOM 5 O5' G B 56 5.623 17.258 14.033 1.00 31.20 O
ATOM 6 C5' G B 56 4.760 17.765 13.035 1.00 28.01 C
ATOM 7 C4' G B 56 5.372 17.637 11.668 1.00 28.88 C
ATOM 8 O4' G B 56 5.444 16.238 11.286 1.00 26.69 O
ATOM 9 C3' G B 56 4.594 18.285 10.542 1.00 28.95 C
ATOM 10 O3' G B 56 4.811 19.679 10.461 1.00 29.30 O
ATOM 11 C2' G B 56 5.069 17.511 9.321 1.00 27.14 C
ATOM 12 O2' G B 56 6.356 17.951 8.920 1.00 29.49 O
ATOM 13 C1' G B 56 5.203 16.104 9.901 1.00 27.12 C
ATOM 14 N9 G B 56 3.974 15.306 9.717 1.00 26.57 N
ATOM 15 C8 G B 56 3.000 15.072 10.659 1.00 27.67 C
ATOM 16 N7 G B 56 2.036 14.310 10.214 1.00 29.60 N
ATOM 17 C5 G B 56 2.395 14.020 8.903 1.00 27.52 C
ATOM 18 C6 G B 56 1.737 13.236 7.916 1.00 27.89 C
ATOM 19 O6 G B 56 0.668 12.621 8.007 1.00 27.28 O
ATOM 20 N1 G B 56 2.446 13.207 6.720 1.00 28.24 N
ATOM 21 C2 G B 56 3.642 13.848 6.505 1.00 28.11 C
ATOM 22 N2 G B 56 4.186 13.704 5.285 1.00 19.86 N
ATOM 23 N3 G B 56 4.265 14.576 7.418 1.00 27.54 N
ATOM 24 C4 G B 56 3.590 14.625 8.584 1.00 26.65 C
ATOM 25 P C B 57 3.798 20.593 9.628 1.00 35.22 P
ATOM 26 OP1 C B 57 4.345 21.971 9.631 1.00 36.63 O
ATOM 27 OP2 C B 57 2.442 20.360 10.182 1.00 31.76 O
ATOM 28 O5' C B 57 3.907 19.968 8.171 1.00 26.61 O
TER
ATOM 2 P U A 19 -2.536 10.610 18.660 1.00 31.24 P
ATOM 3 OP1 U A 19 -2.859 11.357 19.900 1.00 28.66 O
ATOM 4 OP2 U A 19 -3.634 10.268 17.723 1.00 29.07 O
ATOM 5 O5' U A 19 -1.360 11.342 17.873 1.00 21.92 O
ATOM 6 C5' U A 19 -0.130 11.630 18.517 1.00 22.40 C
ATOM 7 C4' U A 19 0.901 12.134 17.543 1.00 20.75 C
ATOM 8 O4' U A 19 1.340 11.055 16.677 1.00 21.37 O
ATOM 9 C3' U A 19 0.438 13.205 16.576 1.00 23.60 C
ATOM 10 O3' U A 19 0.381 14.490 17.167 1.00 29.19 O
ATOM 11 C2' U A 19 1.463 13.085 15.457 1.00 24.63 C
ATOM 12 O2' U A 19 2.692 13.679 15.844 1.00 26.91 O
ATOM 13 C1' U A 19 1.665 11.571 15.403 1.00 21.55 C
ATOM 14 N1 U A 19 0.796 10.924 14.398 1.00 20.17 N
ATOM 15 C2 U A 19 1.294 10.775 13.119 1.00 19.33 C
ATOM 16 O2 U A 19 2.398 11.157 12.787 1.00 22.00 O
ATOM 17 N3 U A 19 0.453 10.161 12.228 1.00 23.54 N
ATOM 18 C4 U A 19 -0.813 9.678 12.486 1.00 24.83 C
ATOM 19 O4 U A 19 -1.446 9.143 11.573 1.00 25.17 O
ATOM 20 C5 U A 19 -1.260 9.867 13.834 1.00 24.78 C
ATOM 21 C6 U A 19 -0.459 10.463 14.726 1.00 22.32 C
ATOM 22 P U A 20 -0.770 15.528 16.741 1.00 33.11 P
ATOM 23 OP1 U A 20 -1.669 14.821 15.793 1.00 29.70 O
ATOM 24 OP2 U A 20 -0.090 16.766 16.294 1.00 31.22 O
ATOM 25 O5' U A 20 -1.538 15.795 18.111 1.00 36.72 O
TER
ATOM 1 O3' A B 55 6.283 14.869 13.757 1.00 28.83 O
ATOM 2 P G B 56 5.371 15.825 14.664 1.00 29.68 P
ATOM 3 OP1 G B 56 5.919 15.780 16.039 1.00 28.64 O
ATOM 4 OP2 G B 56 3.961 15.420 14.441 1.00 28.96 O
ATOM 5 O5' G B 56 5.623 17.258 14.033 1.00 31.20 O
ATOM 6 C5' G B 56 4.760 17.765 13.035 1.00 28.01 C
ATOM 7 C4' G B 56 5.372 17.637 11.668 1.00 28.88 C
ATOM 8 O4' G B 56 5.444 16.238 11.286 1.00 26.69 O
ATOM 9 C3' G B 56 4.594 18.285 10.542 1.00 28.95 C
ATOM 10 O3' G B 56 4.811 19.679 10.461 1.00 29.30 O
ATOM 11 C2' G B 56 5.069 17.511 9.321 1.00 27.14 C
ATOM 12 O2' G B 56 6.356 17.951 8.920 1.00 29.49 O
ATOM 13 C1' G B 56 5.203 16.104 9.901 1.00 27.12 C
ATOM 14 N9 G B 56 3.974 15.306 9.717 1.00 26.57 N
ATOM 15 C8 G B 56 3.000 15.072 10.659 1.00 27.67 C
ATOM 16 N7 G B 56 2.036 14.310 10.214 1.00 29.60 N
ATOM 17 C5 G B 56 2.395 14.020 8.903 1.00 27.52 C
ATOM 18 C6 G B 56 1.737 13.236 7.916 1.00 27.89 C
ATOM 19 O6 G B 56 0.668 12.621 8.007 1.00 27.28 O
ATOM 20 N1 G B 56 2.446 13.207 6.720 1.00 28.24 N
ATOM 21 C2 G B 56 3.642 13.848 6.505 1.00 28.11 C
ATOM 22 N2 G B 56 4.186 13.704 5.285 1.00 19.86 N
ATOM 23 N3 G B 56 4.265 14.576 7.418 1.00 27.54 N
ATOM 24 C4 G B 56 3.590 14.625 8.584 1.00 26.65 C
ATOM 25 P C B 57 3.798 20.593 9.628 1.00 35.22 P
ATOM 26 OP1 C B 57 4.345 21.971 9.631 1.00 36.63 O
ATOM 27 OP2 C B 57 2.442 20.360 10.182 1.00 31.76 O
ATOM 28 O5' C B 57 3.907 19.968 8.171 1.00 26.61 O
TER
Atoms:
C4: (-0.813,9.678,12.486)
N3: (0.453,10.161,12.228)
OP1: (-2.859,11.357,19.900)
OP2: (-3.634,10.268,17.723)
C2: (1.294,10.775,13.119)
C1': (1.665,11.571,15.403)
C3': (0.438,13.205,16.576)
O5': (-1.360,11.342,17.873)
O4': (1.340,11.055,16.677)
C5': (-0.130,11.630,18.517)
P: (-2.536,10.610,18.660)
C4': (0.901,12.134,17.543)
C2': (1.463,13.085,15.457)
O2': (2.692,13.679,15.844)
N1: (0.796,10.924,14.398)
O4: (-1.446,9.143,11.573)
O2: (2.398,11.157,12.787)
C6: (-0.459,10.463,14.726)
C5: (-1.260,9.867,13.834)
O3': (0.381,14.490,17.167)
N3: (0.453,10.161,12.228)
OP1: (-2.859,11.357,19.900)
OP2: (-3.634,10.268,17.723)
C2: (1.294,10.775,13.119)
C1': (1.665,11.571,15.403)
C3': (0.438,13.205,16.576)
O5': (-1.360,11.342,17.873)
O4': (1.340,11.055,16.677)
C5': (-0.130,11.630,18.517)
P: (-2.536,10.610,18.660)
C4': (0.901,12.134,17.543)
C2': (1.463,13.085,15.457)
O2': (2.692,13.679,15.844)
N1: (0.796,10.924,14.398)
O4: (-1.446,9.143,11.573)
O2: (2.398,11.157,12.787)
C6: (-0.459,10.463,14.726)
C5: (-1.260,9.867,13.834)
O3': (0.381,14.490,17.167)
OP1: (5.919,15.780,16.039)
OP2: (3.961,15.420,14.441)
C3': (4.594,18.285,10.542)
C1': (5.203,16.104,9.901)
C5': (4.760,17.765,13.035)
O6: (0.668,12.621,8.007)
O4': (5.444,16.238,11.286)
C8: (3.000,15.072,10.659)
C2: (3.642,13.848,6.505)
C6: (1.737,13.236,7.916)
C5: (2.395,14.020,8.903)
C4: (3.590,14.625,8.584)
P: (5.371,15.825,14.664)
C4': (5.372,17.637,11.668)
C2': (5.069,17.511,9.321)
O2': (6.356,17.951,8.920)
N1: (2.446,13.207,6.720)
N2: (4.186,13.704,5.285)
N3: (4.265,14.576,7.418)
N7: (2.036,14.310,10.214)
N9: (3.974,15.306,9.717)
O5': (5.623,17.258,14.033)
O3': (4.811,19.679,10.461)
OP2: (3.961,15.420,14.441)
C3': (4.594,18.285,10.542)
C1': (5.203,16.104,9.901)
C5': (4.760,17.765,13.035)
O6: (0.668,12.621,8.007)
O4': (5.444,16.238,11.286)
C8: (3.000,15.072,10.659)
C2: (3.642,13.848,6.505)
C6: (1.737,13.236,7.916)
C5: (2.395,14.020,8.903)
C4: (3.590,14.625,8.584)
P: (5.371,15.825,14.664)
C4': (5.372,17.637,11.668)
C2': (5.069,17.511,9.321)
O2': (6.356,17.951,8.920)
N1: (2.446,13.207,6.720)
N2: (4.186,13.704,5.285)
N3: (4.265,14.576,7.418)
N7: (2.036,14.310,10.214)
N9: (3.974,15.306,9.717)
O5': (5.623,17.258,14.033)
O3': (4.811,19.679,10.461)
Image (generated by PyMOL):