ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61266:61269

Extra

PDB:
ATOM 1 O3' G A1265 232.953 -21.272 277.038 1.00 91.24 O
ATOM 2 P U A1266 233.981 -21.785 275.919 1.00 87.41 P
ATOM 3 OP1 U A1266 233.195 -22.032 274.677 1.00 87.16 O
ATOM 4 OP2 U A1266 234.751 -22.907 276.514 1.00 87.34 O
ATOM 5 O5' U A1266 234.932 -20.535 275.724 1.00 87.30 O
ATOM 6 C5' U A1266 234.408 -19.289 275.333 1.00 87.41 C
ATOM 7 C4' U A1266 235.400 -18.198 275.565 1.00 87.43 C
ATOM 8 O4' U A1266 235.807 -18.188 276.949 1.00 87.81 O
ATOM 9 C3' U A1266 236.707 -18.328 274.823 1.00 86.97 C
ATOM 10 O3' U A1266 236.602 -17.957 273.464 1.00 86.62 O
ATOM 11 C2' U A1266 237.625 -17.420 275.624 1.00 87.20 C
ATOM 12 O2' U A1266 237.464 -16.069 275.215 1.00 87.25 O
ATOM 13 C1' U A1266 237.067 -17.575 277.046 1.00 87.72 C
ATOM 14 N1 U A1266 237.949 -18.385 277.912 1.00 87.78 N
ATOM 15 C2 U A1266 238.952 -17.651 278.507 1.00 87.94 C
ATOM 16 O2 U A1266 239.070 -16.451 278.323 1.00 88.02 O
ATOM 17 N3 U A1266 239.811 -18.368 279.316 1.00 88.02 N
ATOM 18 C4 U A1266 239.814 -19.713 279.621 1.00 87.95 C
ATOM 19 O4 U A1266 240.681 -20.167 280.397 1.00 88.06 O
ATOM 20 C5 U A1266 238.738 -20.404 278.961 1.00 87.78 C
ATOM 21 C6 U A1266 237.867 -19.746 278.152 1.00 87.70 C
ATOM 22 P G A1267 236.758 -19.065 272.310 1.00 74.92 P
ATOM 23 OP1 G A1267 236.055 -18.554 271.106 1.00 74.74 O
ATOM 24 OP2 G A1267 236.330 -20.361 272.895 1.00 75.03 O
ATOM 25 O5' G A1267 238.322 -19.070 272.029 1.00 74.64 O
TER

ATOM 1 O3' C B1268 238.918 -15.448 271.880 1.00 93.43 O
ATOM 2 P A B1269 240.034 -15.538 273.024 1.00 83.75 P
ATOM 3 OP1 A B1269 240.521 -16.929 273.045 1.00 83.56 O
ATOM 4 OP2 A B1269 239.447 -14.970 274.257 1.00 84.25 O
ATOM 5 O5' A B1269 241.179 -14.589 272.492 1.00 83.60 O
ATOM 6 C5' A B1269 240.913 -13.238 272.200 1.00 83.69 C
ATOM 7 C4' A B1269 241.881 -12.338 272.901 1.00 83.94 C
ATOM 8 O4' A B1269 241.584 -12.311 274.327 1.00 84.41 O
ATOM 9 C3' A B1269 243.320 -12.777 272.857 1.00 83.78 C
ATOM 10 O3' A B1269 243.952 -12.501 271.620 1.00 83.42 O
ATOM 11 C2' A B1269 243.898 -12.026 274.040 1.00 84.22 C
ATOM 12 O2' A B1269 243.952 -10.640 273.747 1.00 84.31 O
ATOM 13 C1' A B1269 242.785 -12.232 275.059 1.00 84.58 C
ATOM 14 N9 A B1269 242.930 -13.484 275.826 1.00 84.65 N
ATOM 15 C8 A B1269 242.051 -14.544 275.771 1.00 84.55 C
ATOM 16 N7 A B1269 242.352 -15.550 276.570 1.00 84.66 N
ATOM 17 C5 A B1269 243.513 -15.132 277.217 1.00 84.85 C
ATOM 18 C6 A B1269 244.343 -15.740 278.189 1.00 85.05 C
ATOM 19 N6 A B1269 244.152 -16.941 278.713 1.00 85.08 N
ATOM 20 N1 A B1269 245.418 -15.072 278.633 1.00 85.26 N
ATOM 21 C2 A B1269 245.630 -13.859 278.110 1.00 85.24 C
ATOM 22 N3 A B1269 244.933 -13.172 277.190 1.00 85.05 N
ATOM 23 C4 A B1269 243.866 -13.859 276.772 1.00 84.86 C
ATOM 24 P U B1270 245.130 -13.473 271.093 1.00 86.28 P
ATOM 25 OP1 U B1270 245.898 -12.726 270.047 1.00 86.06 O
ATOM 26 OP2 U B1270 244.490 -14.759 270.729 1.00 86.06 O
ATOM 27 O5' U B1270 246.030 -13.669 272.393 1.00 86.62 O
TER

Atoms:
C4: (239.814,-19.713,279.621)
N3: (239.811,-18.368,279.316)
OP1: (233.195,-22.032,274.677)
OP2: (234.751,-22.907,276.514)
C2: (238.952,-17.651,278.507)
C1': (237.067,-17.575,277.046)
C3': (236.707,-18.328,274.823)
O5': (234.932,-20.535,275.724)
O4': (235.807,-18.188,276.949)
C5': (234.408,-19.289,275.333)
P: (233.981,-21.785,275.919)
C4': (235.400,-18.198,275.565)
C2': (237.625,-17.420,275.624)
O2': (237.464,-16.069,275.215)
N1: (237.949,-18.385,277.912)
O4: (240.681,-20.167,280.397)
O2: (239.070,-16.451,278.323)
C6: (237.867,-19.746,278.152)
C5: (238.738,-20.404,278.961)
O3': (236.602,-17.957,273.464)
OP1: (240.521,-16.929,273.045)
OP2: (239.447,-14.970,274.257)
C3': (243.320,-12.777,272.857)
C1': (242.785,-12.232,275.059)
C5': (240.913,-13.238,272.200)
O4': (241.584,-12.311,274.327)
C8: (242.051,-14.544,275.771)
O2': (243.952,-10.640,273.747)
C6: (244.343,-15.740,278.189)
C5: (243.513,-15.132,277.217)
C4: (243.866,-13.859,276.772)
P: (240.034,-15.538,273.024)
C4': (241.881,-12.338,272.901)
C2': (243.898,-12.026,274.040)
C2: (245.630,-13.859,278.110)
N1: (245.418,-15.072,278.633)
N3: (244.933,-13.172,277.190)
N6: (244.152,-16.941,278.713)
N7: (242.352,-15.550,276.570)
N9: (242.930,-13.484,275.826)
O5': (241.179,-14.589,272.492)
O3': (243.952,-12.501,271.620)
Image (generated by PyMOL):
PyMOL image
show in jmol