ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A368:A370

Extra

PDB:
ATOM 1 O3' C A 367 59.706 -3.567 88.295 1.00 84.93 O
ATOM 2 P U A 368 60.982 -2.725 87.806 1.00 94.31 P
ATOM 3 OP1 U A 368 61.900 -3.638 87.068 1.00 92.20 O
ATOM 4 OP2 U A 368 61.489 -1.948 88.973 1.00 92.24 O
ATOM 5 O5' U A 368 60.352 -1.674 86.790 1.00 80.00 O
ATOM 6 C5' U A 368 59.757 -2.101 85.571 1.00 77.60 C
ATOM 7 C4' U A 368 59.600 -0.929 84.642 1.00 76.32 C
ATOM 8 O4' U A 368 58.445 -0.135 85.015 1.00 76.54 O
ATOM 9 C3' U A 368 60.749 0.056 84.688 1.00 72.39 C
ATOM 10 O3' U A 368 61.853 -0.351 83.920 1.00 71.96 O
ATOM 11 C2' U A 368 60.120 1.340 84.188 1.00 77.68 C
ATOM 12 O2' U A 368 60.051 1.361 82.773 1.00 79.51 O
ATOM 13 C1' U A 368 58.723 1.242 84.807 1.00 75.05 C
ATOM 14 N1 U A 368 58.635 1.924 86.109 1.00 74.24 N
ATOM 15 C2 U A 368 57.943 3.132 86.185 1.00 78.63 C
ATOM 16 O2 U A 368 57.401 3.657 85.223 1.00 78.39 O
ATOM 17 N3 U A 368 57.908 3.698 87.435 1.00 78.54 N
ATOM 18 C4 U A 368 58.478 3.200 88.593 1.00 78.77 C
ATOM 19 O4 U A 368 58.327 3.804 89.656 1.00 83.71 O
ATOM 20 C5 U A 368 59.174 1.961 88.433 1.00 75.81 C
ATOM 21 C6 U A 368 59.227 1.381 87.231 1.00 76.97 C
ATOM 22 P G A 369 63.309 -0.166 84.543 1.00 79.15 P
ATOM 23 OP1 G A 369 63.749 -1.462 85.154 1.00 77.90 O
ATOM 24 OP2 G A 369 63.157 1.037 85.396 1.00 77.73 O
ATOM 25 O5' G A 369 64.224 0.250 83.295 1.00 77.14 O
TER

ATOM 1 O3' G B 369 64.835 2.581 79.674 1.00 62.46 O
ATOM 2 P A B 370 64.073 2.603 78.253 1.00 65.51 P
ATOM 3 OP1 A B 370 63.169 1.427 78.152 1.00 66.12 O
ATOM 4 OP2 A B 370 65.096 2.834 77.208 1.00 63.24 O
ATOM 5 O5' A B 370 63.190 3.935 78.286 1.00 73.51 O
ATOM 6 C5' A B 370 62.104 4.068 79.194 1.00 73.63 C
ATOM 7 C4' A B 370 61.346 5.367 78.964 1.00 71.48 C
ATOM 8 O4' A B 370 60.121 5.306 79.735 1.00 70.52 O
ATOM 9 C3' A B 370 62.034 6.684 79.354 1.00 72.32 C
ATOM 10 O3' A B 370 62.668 7.223 78.187 1.00 74.80 O
ATOM 11 C2' A B 370 60.866 7.558 79.800 1.00 76.89 C
ATOM 12 O2' A B 370 60.214 8.193 78.718 1.00 79.10 O
ATOM 13 C1' A B 370 59.915 6.527 80.412 1.00 74.67 C
ATOM 14 N9 A B 370 60.137 6.283 81.839 1.00 81.46 N
ATOM 15 C8 A B 370 60.530 5.116 82.455 1.00 81.48 C
ATOM 16 N7 A B 370 60.642 5.215 83.757 1.00 76.14 N
ATOM 17 C5 A B 370 60.296 6.531 84.019 1.00 77.06 C
ATOM 18 C6 A B 370 60.199 7.262 85.211 1.00 79.05 C
ATOM 19 N6 A B 370 60.425 6.741 86.419 1.00 79.64 N
ATOM 20 N1 A B 370 59.843 8.565 85.122 1.00 80.80 N
ATOM 21 C2 A B 370 59.584 9.080 83.914 1.00 81.43 C
ATOM 22 N3 A B 370 59.621 8.488 82.725 1.00 82.94 N
ATOM 23 C4 A B 370 59.989 7.201 82.848 1.00 82.08 C
ATOM 24 P C B 371 63.573 8.561 78.259 1.00 62.59 P
ATOM 25 OP1 C B 371 62.996 9.518 77.275 1.00 54.97 O
ATOM 26 OP2 C B 371 64.997 8.140 78.130 1.00 65.87 O
ATOM 27 O5' C B 371 63.400 9.138 79.729 1.00 69.77 O
TER

Atoms:
C4: (58.478,3.200,88.593)
N3: (57.908,3.698,87.435)
OP1: (61.900,-3.638,87.068)
OP2: (61.489,-1.948,88.973)
C2: (57.943,3.132,86.185)
C1': (58.723,1.242,84.807)
C3': (60.749,0.056,84.688)
O5': (60.352,-1.674,86.790)
O4': (58.445,-0.135,85.015)
C5': (59.757,-2.101,85.571)
P: (60.982,-2.725,87.806)
C4': (59.600,-0.929,84.642)
C2': (60.120,1.340,84.188)
O2': (60.051,1.361,82.773)
N1: (58.635,1.924,86.109)
O4: (58.327,3.804,89.656)
O2: (57.401,3.657,85.223)
C6: (59.227,1.381,87.231)
C5: (59.174,1.961,88.433)
O3': (61.853,-0.351,83.920)
OP1: (63.169,1.427,78.152)
OP2: (65.096,2.834,77.208)
C3': (62.034,6.684,79.354)
C1': (59.915,6.527,80.412)
C5': (62.104,4.068,79.194)
O4': (60.121,5.306,79.735)
C8: (60.530,5.116,82.455)
O2': (60.214,8.193,78.718)
C6: (60.199,7.262,85.211)
C5: (60.296,6.531,84.019)
C4: (59.989,7.201,82.848)
P: (64.073,2.603,78.253)
C4': (61.346,5.367,78.964)
C2': (60.866,7.558,79.800)
C2: (59.584,9.080,83.914)
N1: (59.843,8.565,85.122)
N3: (59.621,8.488,82.725)
N6: (60.425,6.741,86.419)
N7: (60.642,5.215,83.757)
N9: (60.137,6.283,81.839)
O5': (63.190,3.935,78.286)
O3': (62.668,7.223,78.187)
Image (generated by PyMOL):
PyMOL image
show in jmol