ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3D0U:A105:A107

Extra

PDB:
ATOM 1 O3' U A 104 23.516 54.261 0.340 1.00 42.01 O
ATOM 2 P U A 105 24.378 54.291 1.699 1.00 47.06 P
ATOM 3 OP1 U A 105 25.371 55.388 1.593 1.00 43.35 O
ATOM 4 OP2 U A 105 24.851 52.918 2.008 1.00 39.41 O
ATOM 5 O5' U A 105 23.250 54.701 2.756 1.00 41.48 O
ATOM 6 C5' U A 105 22.559 55.919 2.550 1.00 40.52 C
ATOM 7 C4' U A 105 21.408 56.064 3.525 1.00 43.93 C
ATOM 8 O4' U A 105 20.306 55.213 3.130 1.00 41.86 O
ATOM 9 C3' U A 105 21.714 55.677 4.964 1.00 46.00 C
ATOM 10 O3' U A 105 22.272 56.804 5.626 1.00 47.50 O
ATOM 11 C2' U A 105 20.311 55.395 5.488 1.00 46.48 C
ATOM 12 O2' U A 105 19.633 56.583 5.851 1.00 49.03 O
ATOM 13 C1' U A 105 19.623 54.768 4.281 1.00 40.06 C
ATOM 14 N1 U A 105 19.700 53.302 4.268 1.00 39.55 N
ATOM 15 C2 U A 105 18.633 52.576 4.735 1.00 40.06 C
ATOM 16 O2 U A 105 17.626 53.105 5.167 1.00 42.88 O
ATOM 17 N3 U A 105 18.785 51.215 4.681 1.00 36.17 N
ATOM 18 C4 U A 105 19.887 50.537 4.208 1.00 36.26 C
ATOM 19 O4 U A 105 19.893 49.316 4.218 1.00 41.37 O
ATOM 20 C5 U A 105 20.961 51.364 3.733 1.00 38.21 C
ATOM 21 C6 U A 105 20.834 52.694 3.779 1.00 40.62 C
ATOM 22 P G A 106 23.550 56.668 6.572 1.00 49.38 P
ATOM 23 OP1 G A 106 24.076 58.032 6.806 1.00 51.95 O
ATOM 24 OP2 G A 106 24.445 55.593 6.086 1.00 43.34 O
ATOM 25 O5' G A 106 22.847 56.162 7.903 1.00 53.56 O
TER

ATOM 1 O3' G B 106 20.572 56.005 10.122 1.00 53.84 O
ATOM 2 P G B 107 19.700 57.347 9.977 1.00 57.55 P
ATOM 3 OP1 G B 107 19.287 57.499 8.562 1.00 50.39 O
ATOM 4 OP2 G B 107 20.436 58.448 10.636 1.00 57.77 O
ATOM 5 O5' G B 107 18.395 57.004 10.843 1.00 47.37 O
ATOM 6 C5' G B 107 17.291 57.880 10.776 1.00 45.13 C
ATOM 7 C4' G B 107 16.056 57.290 11.432 1.00 45.86 C
ATOM 8 O4' G B 107 15.161 56.748 10.429 1.00 47.67 O
ATOM 9 C3' G B 107 16.282 56.163 12.429 1.00 44.62 C
ATOM 10 O3' G B 107 16.390 56.715 13.727 1.00 46.85 O
ATOM 11 C2' G B 107 14.990 55.364 12.291 1.00 43.94 C
ATOM 12 O2' G B 107 13.893 55.976 12.935 1.00 45.53 O
ATOM 13 C1' G B 107 14.796 55.437 10.791 1.00 44.32 C
ATOM 14 N9 G B 107 15.738 54.578 10.115 1.00 43.54 N
ATOM 15 C8 G B 107 16.882 54.970 9.463 1.00 47.05 C
ATOM 16 N7 G B 107 17.551 53.976 8.948 1.00 43.92 N
ATOM 17 C5 G B 107 16.793 52.872 9.294 1.00 39.46 C
ATOM 18 C6 G B 107 17.034 51.525 9.008 1.00 40.99 C
ATOM 19 O6 G B 107 18.001 51.082 8.374 1.00 42.39 O
ATOM 20 N1 G B 107 16.031 50.696 9.536 1.00 43.72 N
ATOM 21 C2 G B 107 14.932 51.143 10.254 1.00 45.13 C
ATOM 22 N2 G B 107 14.060 50.205 10.690 1.00 39.29 N
ATOM 23 N3 G B 107 14.706 52.434 10.522 1.00 41.68 N
ATOM 24 C4 G B 107 15.677 53.221 10.012 1.00 39.30 C
ATOM 25 P C B 108 17.174 55.931 14.879 1.00 49.11 P
ATOM 26 OP1 C B 108 17.198 56.833 16.049 1.00 50.34 O
ATOM 27 OP2 C B 108 18.445 55.400 14.331 1.00 47.00 O
ATOM 28 O5' C B 108 16.220 54.680 15.192 1.00 42.26 O
TER

Atoms:
C4: (19.887,50.537,4.208)
N3: (18.785,51.215,4.681)
OP1: (25.371,55.388,1.593)
OP2: (24.851,52.918,2.008)
C2: (18.633,52.576,4.735)
C1': (19.623,54.768,4.281)
C3': (21.714,55.677,4.964)
O5': (23.250,54.701,2.756)
O4': (20.306,55.213,3.130)
C5': (22.559,55.919,2.550)
P: (24.378,54.291,1.699)
C4': (21.408,56.064,3.525)
C2': (20.311,55.395,5.488)
O2': (19.633,56.583,5.851)
N1: (19.700,53.302,4.268)
O4: (19.893,49.316,4.218)
O2: (17.626,53.105,5.167)
C6: (20.834,52.694,3.779)
C5: (20.961,51.364,3.733)
O3': (22.272,56.804,5.626)
OP1: (19.287,57.499,8.562)
OP2: (20.436,58.448,10.636)
C3': (16.282,56.163,12.429)
C1': (14.796,55.437,10.791)
C5': (17.291,57.880,10.776)
O6: (18.001,51.082,8.374)
O4': (15.161,56.748,10.429)
C8: (16.882,54.970,9.463)
C2: (14.932,51.143,10.254)
C6: (17.034,51.525,9.008)
C5: (16.793,52.872,9.294)
C4: (15.677,53.221,10.012)
P: (19.700,57.347,9.977)
C4': (16.056,57.290,11.432)
C2': (14.990,55.364,12.291)
O2': (13.893,55.976,12.935)
N1: (16.031,50.696,9.536)
N2: (14.060,50.205,10.690)
N3: (14.706,52.434,10.522)
N7: (17.551,53.976,8.948)
N9: (15.738,54.578,10.115)
O5': (18.395,57.004,10.843)
O3': (16.390,56.715,13.727)
Image (generated by PyMOL):
PyMOL image
show in jmol