ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1813:A1816

Extra

PDB:
ATOM 1 O3' G A1812 82.871 2.327 -28.698 1.00 53.10 O
ATOM 2 P U A1813 83.092 1.825 -27.186 1.00 59.57 P
ATOM 3 OP1 U A1813 82.359 2.736 -26.276 1.00 54.64 O
ATOM 4 OP2 U A1813 84.549 1.650 -27.016 1.00 57.89 O
ATOM 5 O5' U A1813 82.368 0.406 -27.128 1.00 55.25 O
ATOM 6 C5' U A1813 80.966 0.318 -27.352 1.00 49.32 C
ATOM 7 C4' U A1813 80.547 -1.109 -27.597 1.00 52.44 C
ATOM 8 O4' U A1813 81.323 -1.672 -28.686 1.00 54.87 O
ATOM 9 C3' U A1813 80.770 -2.104 -26.468 1.00 52.64 C
ATOM 10 O3' U A1813 79.731 -2.053 -25.492 1.00 51.11 O
ATOM 11 C2' U A1813 80.752 -3.446 -27.194 1.00 55.38 C
ATOM 12 O2' U A1813 79.447 -3.975 -27.343 1.00 59.71 O
ATOM 13 C1' U A1813 81.318 -3.086 -28.575 1.00 56.18 C
ATOM 14 N1 U A1813 82.651 -3.650 -28.864 1.00 59.06 N
ATOM 15 C2 U A1813 82.750 -5.046 -29.024 1.00 60.37 C
ATOM 16 O2 U A1813 81.794 -5.803 -28.939 1.00 55.18 O
ATOM 17 N3 U A1813 84.009 -5.519 -29.292 1.00 61.99 N
ATOM 18 C4 U A1813 85.165 -4.783 -29.428 1.00 61.39 C
ATOM 19 O4 U A1813 86.233 -5.367 -29.712 1.00 58.49 O
ATOM 20 C5 U A1813 84.987 -3.364 -29.250 1.00 57.94 C
ATOM 21 C6 U A1813 83.772 -2.861 -28.977 1.00 54.82 C
ATOM 22 P G A1814 80.067 -2.329 -23.931 1.00 58.40 P
ATOM 23 OP1 G A1814 79.000 -1.645 -23.154 1.00 56.24 O
ATOM 24 OP2 G A1814 81.497 -1.979 -23.663 1.00 54.23 O
ATOM 25 O5' G A1814 79.914 -3.916 -23.744 1.00 51.51 O
TER

ATOM 1 O3' A B1815 74.634 -9.018 -21.330 1.00 42.03 O
ATOM 2 P A B1816 74.447 -8.813 -22.900 1.00 44.37 P
ATOM 3 OP1 A B1816 73.765 -7.524 -23.179 1.00 44.87 O
ATOM 4 OP2 A B1816 73.860 -10.085 -23.392 1.00 38.99 O
ATOM 5 O5' A B1816 75.936 -8.745 -23.450 1.00 41.19 O
ATOM 6 C5' A B1816 76.857 -9.790 -23.152 1.00 41.73 C
ATOM 7 C4' A B1816 77.123 -10.623 -24.382 1.00 43.75 C
ATOM 8 O4' A B1816 77.692 -9.791 -25.420 1.00 42.67 O
ATOM 9 C3' A B1816 78.128 -11.748 -24.196 1.00 43.96 C
ATOM 10 O3' A B1816 77.478 -12.940 -23.776 1.00 45.45 O
ATOM 11 C2' A B1816 78.695 -11.951 -25.591 1.00 48.31 C
ATOM 12 O2' A B1816 77.942 -12.846 -26.374 1.00 52.90 O
ATOM 13 C1' A B1816 78.617 -10.545 -26.180 1.00 47.11 C
ATOM 14 N9 A B1816 79.912 -9.864 -26.172 1.00 52.11 N
ATOM 15 C8 A B1816 80.266 -8.663 -25.601 1.00 53.31 C
ATOM 16 N7 A B1816 81.513 -8.327 -25.815 1.00 57.05 N
ATOM 17 C5 A B1816 82.018 -9.379 -26.569 1.00 54.73 C
ATOM 18 C6 A B1816 83.286 -9.623 -27.128 1.00 52.84 C
ATOM 19 N6 A B1816 84.313 -8.788 -27.016 1.00 56.36 N
ATOM 20 N1 A B1816 83.460 -10.767 -27.819 1.00 55.13 N
ATOM 21 C2 A B1816 82.424 -11.609 -27.937 1.00 57.28 C
ATOM 22 N3 A B1816 81.182 -11.489 -27.465 1.00 56.03 N
ATOM 23 C4 A B1816 81.045 -10.336 -26.785 1.00 52.34 C
ATOM 24 P C B1817 78.195 -13.893 -22.705 1.00 42.16 P
ATOM 25 OP1 C B1817 77.342 -15.088 -22.426 1.00 40.02 O
ATOM 26 OP2 C B1817 78.541 -12.946 -21.602 1.00 42.46 O
ATOM 27 O5' C B1817 79.502 -14.396 -23.469 1.00 40.74 O
TER

Atoms:
C4: (85.165,-4.783,-29.428)
N3: (84.009,-5.519,-29.292)
OP1: (82.359,2.736,-26.276)
OP2: (84.549,1.650,-27.016)
C2: (82.750,-5.046,-29.024)
C1': (81.318,-3.086,-28.575)
C3': (80.770,-2.104,-26.468)
O5': (82.368,0.406,-27.128)
O4': (81.323,-1.672,-28.686)
C5': (80.966,0.318,-27.352)
P: (83.092,1.825,-27.186)
C4': (80.547,-1.109,-27.597)
C2': (80.752,-3.446,-27.194)
O2': (79.447,-3.975,-27.343)
N1: (82.651,-3.650,-28.864)
O4: (86.233,-5.367,-29.712)
O2: (81.794,-5.803,-28.939)
C6: (83.772,-2.861,-28.977)
C5: (84.987,-3.364,-29.250)
O3': (79.731,-2.053,-25.492)
OP1: (73.765,-7.524,-23.179)
OP2: (73.860,-10.085,-23.392)
C3': (78.128,-11.748,-24.196)
C1': (78.617,-10.545,-26.180)
C5': (76.857,-9.790,-23.152)
O4': (77.692,-9.791,-25.420)
C8: (80.266,-8.663,-25.601)
O2': (77.942,-12.846,-26.374)
C6: (83.286,-9.623,-27.128)
C5: (82.018,-9.379,-26.569)
C4: (81.045,-10.336,-26.785)
P: (74.447,-8.813,-22.900)
C4': (77.123,-10.623,-24.382)
C2': (78.695,-11.951,-25.591)
C2: (82.424,-11.609,-27.937)
N1: (83.460,-10.767,-27.819)
N3: (81.182,-11.489,-27.465)
N6: (84.313,-8.788,-27.016)
N7: (81.513,-8.327,-25.815)
N9: (79.912,-9.864,-26.172)
O5': (75.936,-8.745,-23.450)
O3': (77.478,-12.940,-23.776)
Image (generated by PyMOL):
PyMOL image
show in jmol