Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X70:X103
Extra
PDB:
ATOM 1 O3' G A 69 13.731 -5.011 21.392 1.00 26.94 O
ATOM 2 P U A 70 12.594 -5.945 20.756 1.00 27.56 P
ATOM 3 OP1 U A 70 11.572 -4.962 20.317 1.00 27.32 O
ATOM 4 OP2 U A 70 12.303 -7.019 21.731 1.00 26.92 O
ATOM 5 O5' U A 70 13.287 -6.606 19.489 1.00 26.84 O
ATOM 6 C5' U A 70 13.684 -5.834 18.367 1.00 27.24 C
ATOM 7 C4' U A 70 14.387 -6.723 17.377 1.00 24.45 C
ATOM 8 O4' U A 70 15.531 -7.336 18.028 1.00 23.14 O
ATOM 9 C3' U A 70 13.565 -7.898 16.877 1.00 24.92 C
ATOM 10 O3' U A 70 12.772 -7.555 15.762 1.00 26.98 O
ATOM 11 C2' U A 70 14.606 -8.955 16.552 1.00 24.82 C
ATOM 12 O2' U A 70 15.185 -8.687 15.286 1.00 29.66 O
ATOM 13 C1' U A 70 15.676 -8.675 17.599 1.00 25.14 C
ATOM 14 N1 U A 70 15.649 -9.575 18.769 1.00 23.07 N
ATOM 15 C2 U A 70 16.288 -10.800 18.641 1.00 24.23 C
ATOM 16 O2 U A 70 16.830 -11.169 17.610 1.00 26.38 O
ATOM 17 N3 U A 70 16.264 -11.582 19.766 1.00 25.16 N
ATOM 18 C4 U A 70 15.681 -11.272 20.982 1.00 27.20 C
ATOM 19 O4 U A 70 15.742 -12.090 21.907 1.00 29.70 O
ATOM 20 C5 U A 70 15.043 -9.984 21.037 1.00 24.99 C
ATOM 21 C6 U A 70 15.060 -9.196 19.953 1.00 25.58 C
ATOM 22 P C A 71 11.197 -7.310 15.919 1.00 34.01 P
ATOM 23 OP1 C A 71 10.748 -8.052 17.123 1.00 31.52 O
ATOM 24 OP2 C A 71 10.690 -7.659 14.577 1.00 34.79 O
ATOM 25 O5' C A 71 10.968 -5.758 16.209 1.00 32.37 O
TER
ATOM 1 O3' A B 102 18.060 -10.667 12.777 1.00 33.86 O
ATOM 2 P A B 103 16.561 -11.250 12.653 1.00 37.82 P
ATOM 3 OP1 A B 103 15.942 -10.725 11.415 1.00 38.97 O
ATOM 4 OP2 A B 103 15.885 -10.945 13.938 1.00 35.13 O
ATOM 5 O5' A B 103 16.843 -12.821 12.524 1.00 35.34 O
ATOM 6 C5' A B 103 17.346 -13.440 11.343 1.00 41.21 C
ATOM 7 C4' A B 103 16.821 -14.851 11.219 1.00 42.81 C
ATOM 8 O4' A B 103 17.055 -15.541 12.475 1.00 39.12 O
ATOM 9 C3' A B 103 15.316 -14.947 11.024 1.00 44.28 C
ATOM 10 O3' A B 103 14.908 -14.860 9.673 1.00 46.05 O
ATOM 11 C2' A B 103 14.937 -16.260 11.689 1.00 44.69 C
ATOM 12 O2' A B 103 15.242 -17.367 10.849 1.00 44.71 O
ATOM 13 C1' A B 103 15.904 -16.260 12.868 1.00 40.39 C
ATOM 14 N9 A B 103 15.345 -15.540 14.025 1.00 38.33 N
ATOM 15 C8 A B 103 14.475 -14.468 14.103 1.00 36.58 C
ATOM 16 N7 A B 103 14.228 -14.062 15.328 1.00 34.27 N
ATOM 17 C5 A B 103 14.996 -14.940 16.093 1.00 35.63 C
ATOM 18 C6 A B 103 15.202 -15.078 17.468 1.00 32.40 C
ATOM 19 N6 A B 103 14.634 -14.319 18.401 1.00 29.34 N
ATOM 20 N1 A B 103 16.042 -16.055 17.859 1.00 37.39 N
ATOM 21 C2 A B 103 16.632 -16.833 16.946 1.00 34.31 C
ATOM 22 N3 A B 103 16.525 -16.810 15.631 1.00 35.68 N
ATOM 23 C4 A B 103 15.681 -15.836 15.295 1.00 35.01 C
ATOM 24 P U B 104 13.734 -13.819 9.360 1.00 59.30 P
ATOM 25 OP1 U B 104 13.383 -14.002 7.926 1.00 63.87 O
ATOM 26 OP2 U B 104 14.266 -12.520 9.819 1.00 52.74 O
ATOM 27 O5' U B 104 12.527 -14.232 10.319 1.00 55.34 O
TER
ATOM 2 P U A 70 12.594 -5.945 20.756 1.00 27.56 P
ATOM 3 OP1 U A 70 11.572 -4.962 20.317 1.00 27.32 O
ATOM 4 OP2 U A 70 12.303 -7.019 21.731 1.00 26.92 O
ATOM 5 O5' U A 70 13.287 -6.606 19.489 1.00 26.84 O
ATOM 6 C5' U A 70 13.684 -5.834 18.367 1.00 27.24 C
ATOM 7 C4' U A 70 14.387 -6.723 17.377 1.00 24.45 C
ATOM 8 O4' U A 70 15.531 -7.336 18.028 1.00 23.14 O
ATOM 9 C3' U A 70 13.565 -7.898 16.877 1.00 24.92 C
ATOM 10 O3' U A 70 12.772 -7.555 15.762 1.00 26.98 O
ATOM 11 C2' U A 70 14.606 -8.955 16.552 1.00 24.82 C
ATOM 12 O2' U A 70 15.185 -8.687 15.286 1.00 29.66 O
ATOM 13 C1' U A 70 15.676 -8.675 17.599 1.00 25.14 C
ATOM 14 N1 U A 70 15.649 -9.575 18.769 1.00 23.07 N
ATOM 15 C2 U A 70 16.288 -10.800 18.641 1.00 24.23 C
ATOM 16 O2 U A 70 16.830 -11.169 17.610 1.00 26.38 O
ATOM 17 N3 U A 70 16.264 -11.582 19.766 1.00 25.16 N
ATOM 18 C4 U A 70 15.681 -11.272 20.982 1.00 27.20 C
ATOM 19 O4 U A 70 15.742 -12.090 21.907 1.00 29.70 O
ATOM 20 C5 U A 70 15.043 -9.984 21.037 1.00 24.99 C
ATOM 21 C6 U A 70 15.060 -9.196 19.953 1.00 25.58 C
ATOM 22 P C A 71 11.197 -7.310 15.919 1.00 34.01 P
ATOM 23 OP1 C A 71 10.748 -8.052 17.123 1.00 31.52 O
ATOM 24 OP2 C A 71 10.690 -7.659 14.577 1.00 34.79 O
ATOM 25 O5' C A 71 10.968 -5.758 16.209 1.00 32.37 O
TER
ATOM 1 O3' A B 102 18.060 -10.667 12.777 1.00 33.86 O
ATOM 2 P A B 103 16.561 -11.250 12.653 1.00 37.82 P
ATOM 3 OP1 A B 103 15.942 -10.725 11.415 1.00 38.97 O
ATOM 4 OP2 A B 103 15.885 -10.945 13.938 1.00 35.13 O
ATOM 5 O5' A B 103 16.843 -12.821 12.524 1.00 35.34 O
ATOM 6 C5' A B 103 17.346 -13.440 11.343 1.00 41.21 C
ATOM 7 C4' A B 103 16.821 -14.851 11.219 1.00 42.81 C
ATOM 8 O4' A B 103 17.055 -15.541 12.475 1.00 39.12 O
ATOM 9 C3' A B 103 15.316 -14.947 11.024 1.00 44.28 C
ATOM 10 O3' A B 103 14.908 -14.860 9.673 1.00 46.05 O
ATOM 11 C2' A B 103 14.937 -16.260 11.689 1.00 44.69 C
ATOM 12 O2' A B 103 15.242 -17.367 10.849 1.00 44.71 O
ATOM 13 C1' A B 103 15.904 -16.260 12.868 1.00 40.39 C
ATOM 14 N9 A B 103 15.345 -15.540 14.025 1.00 38.33 N
ATOM 15 C8 A B 103 14.475 -14.468 14.103 1.00 36.58 C
ATOM 16 N7 A B 103 14.228 -14.062 15.328 1.00 34.27 N
ATOM 17 C5 A B 103 14.996 -14.940 16.093 1.00 35.63 C
ATOM 18 C6 A B 103 15.202 -15.078 17.468 1.00 32.40 C
ATOM 19 N6 A B 103 14.634 -14.319 18.401 1.00 29.34 N
ATOM 20 N1 A B 103 16.042 -16.055 17.859 1.00 37.39 N
ATOM 21 C2 A B 103 16.632 -16.833 16.946 1.00 34.31 C
ATOM 22 N3 A B 103 16.525 -16.810 15.631 1.00 35.68 N
ATOM 23 C4 A B 103 15.681 -15.836 15.295 1.00 35.01 C
ATOM 24 P U B 104 13.734 -13.819 9.360 1.00 59.30 P
ATOM 25 OP1 U B 104 13.383 -14.002 7.926 1.00 63.87 O
ATOM 26 OP2 U B 104 14.266 -12.520 9.819 1.00 52.74 O
ATOM 27 O5' U B 104 12.527 -14.232 10.319 1.00 55.34 O
TER
Atoms:
C4: (15.681,-11.272,20.982)
N3: (16.264,-11.582,19.766)
OP1: (11.572,-4.962,20.317)
OP2: (12.303,-7.019,21.731)
C2: (16.288,-10.800,18.641)
C1': (15.676,-8.675,17.599)
C3': (13.565,-7.898,16.877)
O5': (13.287,-6.606,19.489)
O4': (15.531,-7.336,18.028)
C5': (13.684,-5.834,18.367)
P: (12.594,-5.945,20.756)
C4': (14.387,-6.723,17.377)
C2': (14.606,-8.955,16.552)
O2': (15.185,-8.687,15.286)
N1: (15.649,-9.575,18.769)
O4: (15.742,-12.090,21.907)
O2: (16.830,-11.169,17.610)
C6: (15.060,-9.196,19.953)
C5: (15.043,-9.984,21.037)
O3': (12.772,-7.555,15.762)
N3: (16.264,-11.582,19.766)
OP1: (11.572,-4.962,20.317)
OP2: (12.303,-7.019,21.731)
C2: (16.288,-10.800,18.641)
C1': (15.676,-8.675,17.599)
C3': (13.565,-7.898,16.877)
O5': (13.287,-6.606,19.489)
O4': (15.531,-7.336,18.028)
C5': (13.684,-5.834,18.367)
P: (12.594,-5.945,20.756)
C4': (14.387,-6.723,17.377)
C2': (14.606,-8.955,16.552)
O2': (15.185,-8.687,15.286)
N1: (15.649,-9.575,18.769)
O4: (15.742,-12.090,21.907)
O2: (16.830,-11.169,17.610)
C6: (15.060,-9.196,19.953)
C5: (15.043,-9.984,21.037)
O3': (12.772,-7.555,15.762)
OP1: (15.942,-10.725,11.415)
OP2: (15.885,-10.945,13.938)
C3': (15.316,-14.947,11.024)
C1': (15.904,-16.260,12.868)
C5': (17.346,-13.440,11.343)
O4': (17.055,-15.541,12.475)
C8: (14.475,-14.468,14.103)
O2': (15.242,-17.367,10.849)
C6: (15.202,-15.078,17.468)
C5: (14.996,-14.940,16.093)
C4: (15.681,-15.836,15.295)
P: (16.561,-11.250,12.653)
C4': (16.821,-14.851,11.219)
C2': (14.937,-16.260,11.689)
C2: (16.632,-16.833,16.946)
N1: (16.042,-16.055,17.859)
N3: (16.525,-16.810,15.631)
N6: (14.634,-14.319,18.401)
N7: (14.228,-14.062,15.328)
N9: (15.345,-15.540,14.025)
O5': (16.843,-12.821,12.524)
O3': (14.908,-14.860,9.673)
OP2: (15.885,-10.945,13.938)
C3': (15.316,-14.947,11.024)
C1': (15.904,-16.260,12.868)
C5': (17.346,-13.440,11.343)
O4': (17.055,-15.541,12.475)
C8: (14.475,-14.468,14.103)
O2': (15.242,-17.367,10.849)
C6: (15.202,-15.078,17.468)
C5: (14.996,-14.940,16.093)
C4: (15.681,-15.836,15.295)
P: (16.561,-11.250,12.653)
C4': (16.821,-14.851,11.219)
C2': (14.937,-16.260,11.689)
C2: (16.632,-16.833,16.946)
N1: (16.042,-16.055,17.859)
N3: (16.525,-16.810,15.631)
N6: (14.634,-14.319,18.401)
N7: (14.228,-14.062,15.328)
N9: (15.345,-15.540,14.025)
O5': (16.843,-12.821,12.524)
O3': (14.908,-14.860,9.673)
Image (generated by PyMOL):