Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1858:A1859
Extra
PDB:
ATOM 1 O3' U A1857 -103.116 -37.939 83.409 1.00 7.60 O
ATOM 2 P U A1858 -104.329 -38.318 84.356 1.00 9.34 P
ATOM 3 OP1 U A1858 -104.068 -39.666 84.903 1.00 9.34 O
ATOM 4 OP2 U A1858 -105.550 -38.098 83.570 1.00 9.34 O
ATOM 5 O5' U A1858 -104.231 -37.230 85.503 1.00 9.34 O
ATOM 6 C5' U A1858 -102.986 -36.928 86.115 1.00 9.34 C
ATOM 7 C4' U A1858 -103.098 -35.782 87.104 1.00 9.34 C
ATOM 8 O4' U A1858 -103.354 -34.539 86.386 1.00 9.34 O
ATOM 9 C3' U A1858 -104.214 -35.917 88.135 1.00 9.34 C
ATOM 10 O3' U A1858 -103.809 -35.298 89.358 1.00 9.34 O
ATOM 11 C2' U A1858 -105.353 -35.122 87.498 1.00 9.34 C
ATOM 12 O2' U A1858 -106.313 -34.637 88.414 1.00 9.34 O
ATOM 13 C1' U A1858 -104.590 -33.989 86.799 1.00 9.34 C
ATOM 14 N1 U A1858 -105.247 -33.473 85.603 1.00 9.38 N
ATOM 15 C2 U A1858 -104.929 -32.166 85.316 1.00 9.38 C
ATOM 16 O2 U A1858 -104.206 -31.526 86.025 1.00 9.38 O
ATOM 17 N3 U A1858 -105.480 -31.608 84.196 1.00 9.38 N
ATOM 18 C4 U A1858 -106.325 -32.262 83.315 1.00 9.38 C
ATOM 19 O4 U A1858 -106.751 -31.610 82.339 1.00 9.38 O
ATOM 20 C5 U A1858 -106.614 -33.661 83.664 1.00 9.38 C
ATOM 21 C6 U A1858 -106.063 -34.217 84.774 1.00 9.38 C
ATOM 22 P A A1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 23 OP1 A A1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 24 OP2 A A1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 25 O5' A A1859 -102.914 -35.210 91.669 1.00 39.63 O
TER
ATOM 1 O3' U B1858 -103.809 -35.298 89.358 1.00 9.34 O
ATOM 2 P A B1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 3 OP1 A B1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 4 OP2 A B1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 5 O5' A B1859 -102.914 -35.210 91.669 1.00 39.63 O
ATOM 6 C5' A B1859 -104.077 -34.430 91.914 1.00 39.63 C
ATOM 7 C4' A B1859 -103.733 -33.106 92.555 1.00 39.63 C
ATOM 8 O4' A B1859 -103.473 -32.115 91.522 1.00 39.63 O
ATOM 9 C3' A B1859 -104.830 -32.483 93.405 1.00 39.63 C
ATOM 10 O3' A B1859 -104.863 -32.991 94.733 1.00 39.63 O
ATOM 11 C2' A B1859 -104.514 -30.999 93.314 1.00 39.63 C
ATOM 12 O2' A B1859 -103.407 -30.666 94.136 1.00 39.63 O
ATOM 13 C1' A B1859 -104.074 -30.891 91.866 1.00 39.63 C
ATOM 14 N9 A B1859 -105.204 -30.673 90.955 1.00 39.61 N
ATOM 15 C8 A B1859 -105.906 -31.616 90.259 1.00 39.61 C
ATOM 16 N7 A B1859 -106.833 -31.105 89.494 1.00 39.61 N
ATOM 17 C5 A B1859 -106.728 -29.735 89.695 1.00 39.61 C
ATOM 18 C6 A B1859 -107.421 -28.618 89.177 1.00 39.61 C
ATOM 19 N6 A B1859 -108.428 -28.680 88.309 1.00 39.61 N
ATOM 20 N1 A B1859 -107.050 -27.393 89.585 1.00 39.61 N
ATOM 21 C2 A B1859 -106.051 -27.302 90.461 1.00 39.61 C
ATOM 22 N3 A B1859 -105.327 -28.269 91.018 1.00 39.61 N
ATOM 23 C4 A B1859 -105.721 -29.470 90.590 1.00 39.61 C
ATOM 24 P G B1860 -106.174 -33.764 95.271 1.00 60.82 P
ATOM 25 OP1 G B1860 -105.961 -34.018 96.718 1.00 60.82 O
ATOM 26 OP2 G B1860 -106.406 -34.923 94.376 1.00 60.82 O
ATOM 27 O5' G B1860 -107.330 -32.687 95.068 1.00 60.82 O
TER
ATOM 2 P U A1858 -104.329 -38.318 84.356 1.00 9.34 P
ATOM 3 OP1 U A1858 -104.068 -39.666 84.903 1.00 9.34 O
ATOM 4 OP2 U A1858 -105.550 -38.098 83.570 1.00 9.34 O
ATOM 5 O5' U A1858 -104.231 -37.230 85.503 1.00 9.34 O
ATOM 6 C5' U A1858 -102.986 -36.928 86.115 1.00 9.34 C
ATOM 7 C4' U A1858 -103.098 -35.782 87.104 1.00 9.34 C
ATOM 8 O4' U A1858 -103.354 -34.539 86.386 1.00 9.34 O
ATOM 9 C3' U A1858 -104.214 -35.917 88.135 1.00 9.34 C
ATOM 10 O3' U A1858 -103.809 -35.298 89.358 1.00 9.34 O
ATOM 11 C2' U A1858 -105.353 -35.122 87.498 1.00 9.34 C
ATOM 12 O2' U A1858 -106.313 -34.637 88.414 1.00 9.34 O
ATOM 13 C1' U A1858 -104.590 -33.989 86.799 1.00 9.34 C
ATOM 14 N1 U A1858 -105.247 -33.473 85.603 1.00 9.38 N
ATOM 15 C2 U A1858 -104.929 -32.166 85.316 1.00 9.38 C
ATOM 16 O2 U A1858 -104.206 -31.526 86.025 1.00 9.38 O
ATOM 17 N3 U A1858 -105.480 -31.608 84.196 1.00 9.38 N
ATOM 18 C4 U A1858 -106.325 -32.262 83.315 1.00 9.38 C
ATOM 19 O4 U A1858 -106.751 -31.610 82.339 1.00 9.38 O
ATOM 20 C5 U A1858 -106.614 -33.661 83.664 1.00 9.38 C
ATOM 21 C6 U A1858 -106.063 -34.217 84.774 1.00 9.38 C
ATOM 22 P A A1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 23 OP1 A A1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 24 OP2 A A1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 25 O5' A A1859 -102.914 -35.210 91.669 1.00 39.63 O
TER
ATOM 1 O3' U B1858 -103.809 -35.298 89.358 1.00 9.34 O
ATOM 2 P A B1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 3 OP1 A B1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 4 OP2 A B1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 5 O5' A B1859 -102.914 -35.210 91.669 1.00 39.63 O
ATOM 6 C5' A B1859 -104.077 -34.430 91.914 1.00 39.63 C
ATOM 7 C4' A B1859 -103.733 -33.106 92.555 1.00 39.63 C
ATOM 8 O4' A B1859 -103.473 -32.115 91.522 1.00 39.63 O
ATOM 9 C3' A B1859 -104.830 -32.483 93.405 1.00 39.63 C
ATOM 10 O3' A B1859 -104.863 -32.991 94.733 1.00 39.63 O
ATOM 11 C2' A B1859 -104.514 -30.999 93.314 1.00 39.63 C
ATOM 12 O2' A B1859 -103.407 -30.666 94.136 1.00 39.63 O
ATOM 13 C1' A B1859 -104.074 -30.891 91.866 1.00 39.63 C
ATOM 14 N9 A B1859 -105.204 -30.673 90.955 1.00 39.61 N
ATOM 15 C8 A B1859 -105.906 -31.616 90.259 1.00 39.61 C
ATOM 16 N7 A B1859 -106.833 -31.105 89.494 1.00 39.61 N
ATOM 17 C5 A B1859 -106.728 -29.735 89.695 1.00 39.61 C
ATOM 18 C6 A B1859 -107.421 -28.618 89.177 1.00 39.61 C
ATOM 19 N6 A B1859 -108.428 -28.680 88.309 1.00 39.61 N
ATOM 20 N1 A B1859 -107.050 -27.393 89.585 1.00 39.61 N
ATOM 21 C2 A B1859 -106.051 -27.302 90.461 1.00 39.61 C
ATOM 22 N3 A B1859 -105.327 -28.269 91.018 1.00 39.61 N
ATOM 23 C4 A B1859 -105.721 -29.470 90.590 1.00 39.61 C
ATOM 24 P G B1860 -106.174 -33.764 95.271 1.00 60.82 P
ATOM 25 OP1 G B1860 -105.961 -34.018 96.718 1.00 60.82 O
ATOM 26 OP2 G B1860 -106.406 -34.923 94.376 1.00 60.82 O
ATOM 27 O5' G B1860 -107.330 -32.687 95.068 1.00 60.82 O
TER
Atoms:
C4: (-106.325,-32.262,83.315)
N3: (-105.480,-31.608,84.196)
OP1: (-104.068,-39.666,84.903)
OP2: (-105.550,-38.098,83.570)
C2: (-104.929,-32.166,85.316)
C1': (-104.590,-33.989,86.799)
C3': (-104.214,-35.917,88.135)
O5': (-104.231,-37.230,85.503)
O4': (-103.354,-34.539,86.386)
C5': (-102.986,-36.928,86.115)
P: (-104.329,-38.318,84.356)
C4': (-103.098,-35.782,87.104)
C2': (-105.353,-35.122,87.498)
O2': (-106.313,-34.637,88.414)
N1: (-105.247,-33.473,85.603)
O4: (-106.751,-31.610,82.339)
O2: (-104.206,-31.526,86.025)
C6: (-106.063,-34.217,84.774)
C5: (-106.614,-33.661,83.664)
O3': (-103.809,-35.298,89.358)
N3: (-105.480,-31.608,84.196)
OP1: (-104.068,-39.666,84.903)
OP2: (-105.550,-38.098,83.570)
C2: (-104.929,-32.166,85.316)
C1': (-104.590,-33.989,86.799)
C3': (-104.214,-35.917,88.135)
O5': (-104.231,-37.230,85.503)
O4': (-103.354,-34.539,86.386)
C5': (-102.986,-36.928,86.115)
P: (-104.329,-38.318,84.356)
C4': (-103.098,-35.782,87.104)
C2': (-105.353,-35.122,87.498)
O2': (-106.313,-34.637,88.414)
N1: (-105.247,-33.473,85.603)
O4: (-106.751,-31.610,82.339)
O2: (-104.206,-31.526,86.025)
C6: (-106.063,-34.217,84.774)
C5: (-106.614,-33.661,83.664)
O3': (-103.809,-35.298,89.358)
OP1: (-101.400,-35.832,89.764)
OP2: (-103.255,-37.419,90.528)
C3': (-104.830,-32.483,93.405)
C1': (-104.074,-30.891,91.866)
C5': (-104.077,-34.430,91.914)
O4': (-103.473,-32.115,91.522)
C8: (-105.906,-31.616,90.259)
O2': (-103.407,-30.666,94.136)
C6: (-107.421,-28.618,89.177)
C5: (-106.728,-29.735,89.695)
C4: (-105.721,-29.470,90.590)
P: (-102.762,-36.036,90.329)
C4': (-103.733,-33.106,92.555)
C2': (-104.514,-30.999,93.314)
C2: (-106.051,-27.302,90.461)
N1: (-107.050,-27.393,89.585)
N3: (-105.327,-28.269,91.018)
N6: (-108.428,-28.680,88.309)
N7: (-106.833,-31.105,89.494)
N9: (-105.204,-30.673,90.955)
O5': (-102.914,-35.210,91.669)
O3': (-104.863,-32.991,94.733)
OP2: (-103.255,-37.419,90.528)
C3': (-104.830,-32.483,93.405)
C1': (-104.074,-30.891,91.866)
C5': (-104.077,-34.430,91.914)
O4': (-103.473,-32.115,91.522)
C8: (-105.906,-31.616,90.259)
O2': (-103.407,-30.666,94.136)
C6: (-107.421,-28.618,89.177)
C5: (-106.728,-29.735,89.695)
C4: (-105.721,-29.470,90.590)
P: (-102.762,-36.036,90.329)
C4': (-103.733,-33.106,92.555)
C2': (-104.514,-30.999,93.314)
C2: (-106.051,-27.302,90.461)
N1: (-107.050,-27.393,89.585)
N3: (-105.327,-28.269,91.018)
N6: (-108.428,-28.680,88.309)
N7: (-106.833,-31.105,89.494)
N9: (-105.204,-30.673,90.955)
O5': (-102.914,-35.210,91.669)
O3': (-104.863,-32.991,94.733)
Image (generated by PyMOL):