Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:Q111:Q108
Extra
PDB:
ATOM 1 O3' G A 110 2.116 -7.103 38.484 1.00 49.87 O
ATOM 2 P A A 111 3.196 -8.283 38.399 1.00 49.88 P
ATOM 3 OP1 A A 111 4.244 -8.015 39.408 1.00 49.82 O
ATOM 4 OP2 A A 111 3.596 -8.473 36.987 1.00 49.79 O
ATOM 5 O5' A A 111 2.336 -9.556 38.851 1.00 49.93 O
ATOM 6 C5' A A 111 1.878 -9.700 40.195 1.00 50.04 C
ATOM 7 C4' A A 111 0.765 -10.726 40.279 1.00 50.61 C
ATOM 8 O4' A A 111 -0.290 -10.376 39.351 1.00 50.22 O
ATOM 9 C3' A A 111 1.134 -12.150 39.882 1.00 51.30 C
ATOM 10 O3' A A 111 1.775 -12.815 40.966 1.00 52.88 O
ATOM 11 C2' A A 111 -0.234 -12.739 39.547 1.00 50.66 C
ATOM 12 O2' A A 111 -0.959 -13.137 40.696 1.00 51.16 O
ATOM 13 C1' A A 111 -0.943 -11.550 38.896 1.00 49.70 C
ATOM 14 N9 A A 111 -0.955 -11.563 37.431 1.00 48.17 N
ATOM 15 C8 A A 111 0.100 -11.349 36.590 1.00 47.71 C
ATOM 16 N7 A A 111 -0.203 -11.420 35.315 1.00 47.08 N
ATOM 17 C5 A A 111 -1.556 -11.696 35.315 1.00 46.66 C
ATOM 18 C6 A A 111 -2.484 -11.892 34.271 1.00 46.39 C
ATOM 19 N6 A A 111 -2.162 -11.836 32.975 1.00 46.06 N
ATOM 20 N1 A A 111 -3.765 -12.150 34.614 1.00 46.51 N
ATOM 21 C2 A A 111 -4.090 -12.207 35.915 1.00 46.56 C
ATOM 22 N3 A A 111 -3.306 -12.042 36.982 1.00 46.63 N
ATOM 23 C4 A A 111 -2.038 -11.787 36.611 1.00 47.09 C
ATOM 24 P C A 112 3.117 -13.658 40.719 1.00 54.89 P
ATOM 25 OP1 C A 112 3.473 -14.305 42.003 1.00 54.59 O
ATOM 26 OP2 C A 112 4.119 -12.793 40.048 1.00 54.63 O
ATOM 27 O5' C A 112 2.606 -14.799 39.710 1.00 55.23 O
TER
ATOM 1 O3' G B 107 3.064 -6.753 24.642 1.00 59.37 O
ATOM 2 P G B 108 2.421 -5.467 25.343 1.00 58.34 P
ATOM 3 OP1 G B 108 1.377 -4.972 24.418 1.00 58.47 O
ATOM 4 OP2 G B 108 3.514 -4.574 25.788 1.00 58.09 O
ATOM 5 O5' G B 108 1.732 -6.047 26.665 1.00 57.44 O
ATOM 6 C5' G B 108 0.434 -6.628 26.626 1.00 55.83 C
ATOM 7 C4' G B 108 0.038 -7.151 27.994 1.00 54.67 C
ATOM 8 O4' G B 108 1.072 -8.013 28.525 1.00 53.69 O
ATOM 9 C3' G B 108 -0.116 -6.100 29.084 1.00 54.22 C
ATOM 10 O3' G B 108 -1.353 -5.411 28.950 1.00 54.41 O
ATOM 11 C2' G B 108 -0.077 -6.976 30.329 1.00 53.71 C
ATOM 12 O2' G B 108 -1.326 -7.581 30.619 1.00 53.58 O
ATOM 13 C1' G B 108 0.969 -8.022 29.937 1.00 53.15 C
ATOM 14 N9 G B 108 2.275 -7.727 30.521 1.00 52.38 N
ATOM 15 C8 G B 108 3.356 -7.146 29.903 1.00 52.05 C
ATOM 16 N7 G B 108 4.390 -7.000 30.683 1.00 51.61 N
ATOM 17 C5 G B 108 3.969 -7.514 31.901 1.00 51.78 C
ATOM 18 C6 G B 108 4.656 -7.627 33.134 1.00 51.84 C
ATOM 19 O6 G B 108 5.816 -7.283 33.397 1.00 52.09 O
ATOM 20 N1 G B 108 3.867 -8.212 34.127 1.00 51.91 N
ATOM 21 C2 G B 108 2.571 -8.635 33.946 1.00 51.85 C
ATOM 22 N2 G B 108 1.967 -9.173 35.012 1.00 51.70 N
ATOM 23 N3 G B 108 1.913 -8.533 32.795 1.00 51.96 N
ATOM 24 C4 G B 108 2.668 -7.966 31.818 1.00 52.06 C
ATOM 25 P U B 109 -1.387 -3.819 28.769 1.00 54.56 P
ATOM 26 OP1 U B 109 -2.697 -3.476 28.166 1.00 54.51 O
ATOM 27 OP2 U B 109 -0.140 -3.379 28.096 1.00 54.55 O
ATOM 28 O5' U B 109 -1.380 -3.297 30.282 1.00 54.01 O
TER
ATOM 2 P A A 111 3.196 -8.283 38.399 1.00 49.88 P
ATOM 3 OP1 A A 111 4.244 -8.015 39.408 1.00 49.82 O
ATOM 4 OP2 A A 111 3.596 -8.473 36.987 1.00 49.79 O
ATOM 5 O5' A A 111 2.336 -9.556 38.851 1.00 49.93 O
ATOM 6 C5' A A 111 1.878 -9.700 40.195 1.00 50.04 C
ATOM 7 C4' A A 111 0.765 -10.726 40.279 1.00 50.61 C
ATOM 8 O4' A A 111 -0.290 -10.376 39.351 1.00 50.22 O
ATOM 9 C3' A A 111 1.134 -12.150 39.882 1.00 51.30 C
ATOM 10 O3' A A 111 1.775 -12.815 40.966 1.00 52.88 O
ATOM 11 C2' A A 111 -0.234 -12.739 39.547 1.00 50.66 C
ATOM 12 O2' A A 111 -0.959 -13.137 40.696 1.00 51.16 O
ATOM 13 C1' A A 111 -0.943 -11.550 38.896 1.00 49.70 C
ATOM 14 N9 A A 111 -0.955 -11.563 37.431 1.00 48.17 N
ATOM 15 C8 A A 111 0.100 -11.349 36.590 1.00 47.71 C
ATOM 16 N7 A A 111 -0.203 -11.420 35.315 1.00 47.08 N
ATOM 17 C5 A A 111 -1.556 -11.696 35.315 1.00 46.66 C
ATOM 18 C6 A A 111 -2.484 -11.892 34.271 1.00 46.39 C
ATOM 19 N6 A A 111 -2.162 -11.836 32.975 1.00 46.06 N
ATOM 20 N1 A A 111 -3.765 -12.150 34.614 1.00 46.51 N
ATOM 21 C2 A A 111 -4.090 -12.207 35.915 1.00 46.56 C
ATOM 22 N3 A A 111 -3.306 -12.042 36.982 1.00 46.63 N
ATOM 23 C4 A A 111 -2.038 -11.787 36.611 1.00 47.09 C
ATOM 24 P C A 112 3.117 -13.658 40.719 1.00 54.89 P
ATOM 25 OP1 C A 112 3.473 -14.305 42.003 1.00 54.59 O
ATOM 26 OP2 C A 112 4.119 -12.793 40.048 1.00 54.63 O
ATOM 27 O5' C A 112 2.606 -14.799 39.710 1.00 55.23 O
TER
ATOM 1 O3' G B 107 3.064 -6.753 24.642 1.00 59.37 O
ATOM 2 P G B 108 2.421 -5.467 25.343 1.00 58.34 P
ATOM 3 OP1 G B 108 1.377 -4.972 24.418 1.00 58.47 O
ATOM 4 OP2 G B 108 3.514 -4.574 25.788 1.00 58.09 O
ATOM 5 O5' G B 108 1.732 -6.047 26.665 1.00 57.44 O
ATOM 6 C5' G B 108 0.434 -6.628 26.626 1.00 55.83 C
ATOM 7 C4' G B 108 0.038 -7.151 27.994 1.00 54.67 C
ATOM 8 O4' G B 108 1.072 -8.013 28.525 1.00 53.69 O
ATOM 9 C3' G B 108 -0.116 -6.100 29.084 1.00 54.22 C
ATOM 10 O3' G B 108 -1.353 -5.411 28.950 1.00 54.41 O
ATOM 11 C2' G B 108 -0.077 -6.976 30.329 1.00 53.71 C
ATOM 12 O2' G B 108 -1.326 -7.581 30.619 1.00 53.58 O
ATOM 13 C1' G B 108 0.969 -8.022 29.937 1.00 53.15 C
ATOM 14 N9 G B 108 2.275 -7.727 30.521 1.00 52.38 N
ATOM 15 C8 G B 108 3.356 -7.146 29.903 1.00 52.05 C
ATOM 16 N7 G B 108 4.390 -7.000 30.683 1.00 51.61 N
ATOM 17 C5 G B 108 3.969 -7.514 31.901 1.00 51.78 C
ATOM 18 C6 G B 108 4.656 -7.627 33.134 1.00 51.84 C
ATOM 19 O6 G B 108 5.816 -7.283 33.397 1.00 52.09 O
ATOM 20 N1 G B 108 3.867 -8.212 34.127 1.00 51.91 N
ATOM 21 C2 G B 108 2.571 -8.635 33.946 1.00 51.85 C
ATOM 22 N2 G B 108 1.967 -9.173 35.012 1.00 51.70 N
ATOM 23 N3 G B 108 1.913 -8.533 32.795 1.00 51.96 N
ATOM 24 C4 G B 108 2.668 -7.966 31.818 1.00 52.06 C
ATOM 25 P U B 109 -1.387 -3.819 28.769 1.00 54.56 P
ATOM 26 OP1 U B 109 -2.697 -3.476 28.166 1.00 54.51 O
ATOM 27 OP2 U B 109 -0.140 -3.379 28.096 1.00 54.55 O
ATOM 28 O5' U B 109 -1.380 -3.297 30.282 1.00 54.01 O
TER
Atoms:
OP1: (4.244,-8.015,39.408)
OP2: (3.596,-8.473,36.987)
C3': (1.134,-12.150,39.882)
C1': (-0.943,-11.550,38.896)
C5': (1.878,-9.700,40.195)
O4': (-0.290,-10.376,39.351)
C8: (0.100,-11.349,36.590)
O2': (-0.959,-13.137,40.696)
C6: (-2.484,-11.892,34.271)
C5: (-1.556,-11.696,35.315)
C4: (-2.038,-11.787,36.611)
P: (3.196,-8.283,38.399)
C4': (0.765,-10.726,40.279)
C2': (-0.234,-12.739,39.547)
C2: (-4.090,-12.207,35.915)
N1: (-3.765,-12.150,34.614)
N3: (-3.306,-12.042,36.982)
N6: (-2.162,-11.836,32.975)
N7: (-0.203,-11.420,35.315)
N9: (-0.955,-11.563,37.431)
O5': (2.336,-9.556,38.851)
O3': (1.775,-12.815,40.966)
OP2: (3.596,-8.473,36.987)
C3': (1.134,-12.150,39.882)
C1': (-0.943,-11.550,38.896)
C5': (1.878,-9.700,40.195)
O4': (-0.290,-10.376,39.351)
C8: (0.100,-11.349,36.590)
O2': (-0.959,-13.137,40.696)
C6: (-2.484,-11.892,34.271)
C5: (-1.556,-11.696,35.315)
C4: (-2.038,-11.787,36.611)
P: (3.196,-8.283,38.399)
C4': (0.765,-10.726,40.279)
C2': (-0.234,-12.739,39.547)
C2: (-4.090,-12.207,35.915)
N1: (-3.765,-12.150,34.614)
N3: (-3.306,-12.042,36.982)
N6: (-2.162,-11.836,32.975)
N7: (-0.203,-11.420,35.315)
N9: (-0.955,-11.563,37.431)
O5': (2.336,-9.556,38.851)
O3': (1.775,-12.815,40.966)
OP1: (1.377,-4.972,24.418)
OP2: (3.514,-4.574,25.788)
C3': (-0.116,-6.100,29.084)
C1': (0.969,-8.022,29.937)
C5': (0.434,-6.628,26.626)
O6: (5.816,-7.283,33.397)
O4': (1.072,-8.013,28.525)
C8: (3.356,-7.146,29.903)
C2: (2.571,-8.635,33.946)
C6: (4.656,-7.627,33.134)
C5: (3.969,-7.514,31.901)
C4: (2.668,-7.966,31.818)
P: (2.421,-5.467,25.343)
C4': (0.038,-7.151,27.994)
C2': (-0.077,-6.976,30.329)
O2': (-1.326,-7.581,30.619)
N1: (3.867,-8.212,34.127)
N2: (1.967,-9.173,35.012)
N3: (1.913,-8.533,32.795)
N7: (4.390,-7.000,30.683)
N9: (2.275,-7.727,30.521)
O5': (1.732,-6.047,26.665)
O3': (-1.353,-5.411,28.950)
OP2: (3.514,-4.574,25.788)
C3': (-0.116,-6.100,29.084)
C1': (0.969,-8.022,29.937)
C5': (0.434,-6.628,26.626)
O6: (5.816,-7.283,33.397)
O4': (1.072,-8.013,28.525)
C8: (3.356,-7.146,29.903)
C2: (2.571,-8.635,33.946)
C6: (4.656,-7.627,33.134)
C5: (3.969,-7.514,31.901)
C4: (2.668,-7.966,31.818)
P: (2.421,-5.467,25.343)
C4': (0.038,-7.151,27.994)
C2': (-0.077,-6.976,30.329)
O2': (-1.326,-7.581,30.619)
N1: (3.867,-8.212,34.127)
N2: (1.967,-9.173,35.012)
N3: (1.913,-8.533,32.795)
N7: (4.390,-7.000,30.683)
N9: (2.275,-7.727,30.521)
O5': (1.732,-6.047,26.665)
O3': (-1.353,-5.411,28.950)
Image (generated by PyMOL):