ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A363:A381

Extra

PDB:
ATOM 1 O3' C A 362 119.469 60.354 25.459 1.00 64.35 O
ATOM 2 P A A 363 118.726 61.750 25.787 1.00 55.09 P
ATOM 3 OP1 A A 363 117.278 61.415 25.946 1.00 70.94 O
ATOM 4 OP2 A A 363 119.134 62.792 24.802 1.00 70.94 O
ATOM 5 O5' A A 363 119.279 62.266 27.187 1.00 55.09 O
ATOM 6 C5' A A 363 118.362 62.901 28.119 1.00 55.09 C
ATOM 7 C4' A A 363 118.460 64.423 28.082 1.00 55.09 C
ATOM 8 O4' A A 363 119.771 64.844 28.532 1.00 55.09 O
ATOM 9 C3' A A 363 118.221 65.192 26.786 1.00 55.09 C
ATOM 10 O3' A A 363 116.839 65.466 26.552 1.00 55.09 O
ATOM 11 C2' A A 363 118.929 66.513 27.063 1.00 55.09 C
ATOM 12 O2' A A 363 118.126 67.390 27.827 1.00 55.09 O
ATOM 13 C1' A A 363 120.115 66.071 27.921 1.00 55.09 C
ATOM 14 N9 A A 363 121.343 65.876 27.150 1.00 70.94 N
ATOM 15 C8 A A 363 122.087 64.733 27.032 1.00 70.94 C
ATOM 16 N7 A A 363 123.133 64.861 26.262 1.00 70.94 N
ATOM 17 C5 A A 363 123.080 66.180 25.844 1.00 70.94 C
ATOM 18 C6 A A 363 123.909 66.938 24.999 1.00 70.94 C
ATOM 19 N6 A A 363 125.000 66.452 24.401 1.00 70.94 N
ATOM 20 N1 A A 363 123.573 68.226 24.784 1.00 70.94 N
ATOM 21 C2 A A 363 122.476 68.706 25.374 1.00 70.94 C
ATOM 22 N3 A A 363 121.620 68.095 26.185 1.00 70.94 N
ATOM 23 C4 A A 363 121.984 66.818 26.384 1.00 70.94 C
ATOM 24 P A A 364 116.346 65.931 25.085 1.00 45.37 P
ATOM 25 OP1 A A 364 114.881 66.181 25.149 1.00 55.05 O
ATOM 26 OP2 A A 364 116.876 64.942 24.113 1.00 55.05 O
ATOM 27 O5' A A 364 117.079 67.319 24.806 1.00 45.37 O
TER

ATOM 1 O3' C B 380 125.761 70.962 16.414 1.00 40.32 O
ATOM 2 P G B 381 126.723 71.895 17.299 1.00 52.91 P
ATOM 3 OP1 G B 381 126.305 73.287 17.009 1.00 60.71 O
ATOM 4 OP2 G B 381 128.141 71.497 17.122 1.00 60.71 O
ATOM 5 O5' G B 381 126.327 71.555 18.797 1.00 52.91 O
ATOM 6 C5' G B 381 125.024 71.869 19.304 1.00 52.91 C
ATOM 7 C4' G B 381 124.899 71.365 20.714 1.00 52.91 C
ATOM 8 O4' G B 381 124.893 69.910 20.721 1.00 52.91 O
ATOM 9 C3' G B 381 126.081 71.759 21.578 1.00 52.91 C
ATOM 10 O3' G B 381 125.899 73.056 22.121 1.00 52.91 O
ATOM 11 C2' G B 381 126.127 70.651 22.625 1.00 52.91 C
ATOM 12 O2' G B 381 125.227 70.889 23.688 1.00 52.91 O
ATOM 13 C1' G B 381 125.667 69.433 21.812 1.00 52.91 C
ATOM 14 N9 G B 381 126.759 68.607 21.282 1.00 60.71 N
ATOM 15 C8 G B 381 127.282 68.649 20.012 1.00 60.71 C
ATOM 16 N7 G B 381 128.235 67.779 19.819 1.00 60.71 N
ATOM 17 C5 G B 381 128.353 67.121 21.034 1.00 60.71 C
ATOM 18 C6 G B 381 129.209 66.057 21.423 1.00 60.71 C
ATOM 19 O6 G B 381 130.064 65.474 20.756 1.00 60.71 O
ATOM 20 N1 G B 381 128.989 65.680 22.738 1.00 60.71 N
ATOM 21 C2 G B 381 128.066 66.249 23.574 1.00 60.71 C
ATOM 22 N2 G B 381 127.997 65.739 24.802 1.00 60.71 N
ATOM 23 N3 G B 381 127.267 67.243 23.229 1.00 60.71 N
ATOM 24 C4 G B 381 127.458 67.624 21.951 1.00 60.71 C
ATOM 25 P G B 382 127.139 73.802 22.808 1.00 51.35 P
ATOM 26 OP1 G B 382 126.573 74.905 23.617 1.00 57.77 O
ATOM 27 OP2 G B 382 128.161 74.096 21.781 1.00 57.77 O
ATOM 28 O5' G B 382 127.737 72.703 23.788 1.00 51.35 O
TER

Atoms:
OP1: (117.278,61.415,25.946)
OP2: (119.134,62.792,24.802)
C3': (118.221,65.192,26.786)
C1': (120.115,66.071,27.921)
C5': (118.362,62.901,28.119)
O4': (119.771,64.844,28.532)
C8: (122.087,64.733,27.032)
O2': (118.126,67.390,27.827)
C6: (123.909,66.938,24.999)
C5: (123.080,66.180,25.844)
C4: (121.984,66.818,26.384)
P: (118.726,61.750,25.787)
C4': (118.460,64.423,28.082)
C2': (118.929,66.513,27.063)
C2: (122.476,68.706,25.374)
N1: (123.573,68.226,24.784)
N3: (121.620,68.095,26.185)
N6: (125.000,66.452,24.401)
N7: (123.133,64.861,26.262)
N9: (121.343,65.876,27.150)
O5': (119.279,62.266,27.187)
O3': (116.839,65.466,26.552)
OP1: (126.305,73.287,17.009)
OP2: (128.141,71.497,17.122)
C3': (126.081,71.759,21.578)
C1': (125.667,69.433,21.812)
C5': (125.024,71.869,19.304)
O6: (130.064,65.474,20.756)
O4': (124.893,69.910,20.721)
C8: (127.282,68.649,20.012)
C2: (128.066,66.249,23.574)
C6: (129.209,66.057,21.423)
C5: (128.353,67.121,21.034)
C4: (127.458,67.624,21.951)
P: (126.723,71.895,17.299)
C4': (124.899,71.365,20.714)
C2': (126.127,70.651,22.625)
O2': (125.227,70.889,23.688)
N1: (128.989,65.680,22.738)
N2: (127.997,65.739,24.802)
N3: (127.267,67.243,23.229)
N7: (128.235,67.779,19.819)
N9: (126.759,68.607,21.282)
O5': (126.327,71.555,18.797)
O3': (125.899,73.056,22.121)
Image (generated by PyMOL):
PyMOL image
show in jmol