Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:057:056
Extra
PDB:
ATOM 1 O3' G A 56 60.816 159.789 29.288 1.00 45.75 O
ATOM 2 P A A 57 60.697 160.801 28.045 1.00 44.28 P
ATOM 3 OP1 A A 57 59.838 160.187 27.001 1.00 41.78 O
ATOM 4 OP2 A A 57 62.069 161.248 27.706 1.00 41.11 O
ATOM 5 O5' A A 57 59.906 162.048 28.640 1.00 44.42 O
ATOM 6 C5' A A 57 60.319 162.662 29.871 1.00 44.77 C
ATOM 7 C4' A A 57 60.776 164.082 29.625 1.00 46.22 C
ATOM 8 O4' A A 57 61.228 164.649 30.886 1.00 46.29 O
ATOM 9 C3' A A 57 61.955 164.224 28.669 1.00 46.34 C
ATOM 10 O3' A A 57 61.902 165.513 28.047 1.00 46.03 O
ATOM 11 C2' A A 57 63.140 164.142 29.621 1.00 47.06 C
ATOM 12 O2' A A 57 64.319 164.711 29.104 1.00 50.46 O
ATOM 13 C1' A A 57 62.611 164.934 30.816 1.00 47.54 C
ATOM 14 N9 A A 57 63.213 164.575 32.103 1.00 50.61 N
ATOM 15 C8 A A 57 63.833 165.417 32.994 1.00 51.09 C
ATOM 16 N7 A A 57 64.277 164.817 34.070 1.00 51.07 N
ATOM 17 C5 A A 57 63.929 163.488 33.877 1.00 51.23 C
ATOM 18 C6 A A 57 64.135 162.338 34.653 1.00 51.55 C
ATOM 19 N6 A A 57 64.759 162.344 35.830 1.00 50.12 N
ATOM 20 N1 A A 57 63.674 161.164 34.170 1.00 52.46 N
ATOM 21 C2 A A 57 63.046 161.160 32.987 1.00 52.33 C
ATOM 22 N3 A A 57 62.792 162.173 32.166 1.00 51.03 N
ATOM 23 C4 A A 57 63.269 163.324 32.673 1.00 51.12 C
ATOM 24 P U A 58 61.831 165.639 26.445 1.00 44.41 P
ATOM 25 OP1 U A 58 62.778 164.670 25.834 1.00 40.93 O
ATOM 26 OP2 U A 58 61.961 167.083 26.126 1.00 44.76 O
ATOM 27 O5' U A 58 60.332 165.221 26.100 1.00 43.44 O
TER
ATOM 1 O3' C B 55 56.010 155.058 29.221 1.00 43.92 O
ATOM 2 P G B 56 57.574 154.881 28.888 1.00 46.91 P
ATOM 3 OP1 G B 56 57.720 154.887 27.407 1.00 48.10 O
ATOM 4 OP2 G B 56 58.061 153.714 29.668 1.00 45.23 O
ATOM 5 O5' G B 56 58.274 156.192 29.470 1.00 44.70 O
ATOM 6 C5' G B 56 57.883 157.508 29.029 1.00 44.78 C
ATOM 7 C4' G B 56 58.802 158.558 29.619 1.00 45.19 C
ATOM 8 O4' G B 56 58.804 158.447 31.069 1.00 45.61 O
ATOM 9 C3' G B 56 60.264 158.476 29.204 1.00 45.51 C
ATOM 10 O3' G B 56 60.816 159.789 29.288 1.00 45.75 O
ATOM 11 C2' G B 56 60.865 157.619 30.312 1.00 44.67 C
ATOM 12 O2' G B 56 62.255 157.822 30.444 1.00 43.22 O
ATOM 13 C1' G B 56 60.111 158.156 31.528 1.00 44.85 C
ATOM 14 N9 G B 56 59.995 157.246 32.667 1.00 45.15 N
ATOM 15 C8 G B 56 59.200 156.129 32.753 1.00 45.19 C
ATOM 16 N7 G B 56 59.261 155.544 33.918 1.00 45.35 N
ATOM 17 C5 G B 56 60.160 156.313 34.643 1.00 44.70 C
ATOM 18 C6 G B 56 60.620 156.174 35.977 1.00 43.25 C
ATOM 19 O6 G B 56 60.316 155.320 36.813 1.00 42.12 O
ATOM 20 N1 G B 56 61.526 157.170 36.309 1.00 43.07 N
ATOM 21 C2 G B 56 61.942 158.168 35.474 1.00 43.09 C
ATOM 22 N2 G B 56 62.843 159.015 35.984 1.00 42.42 N
ATOM 23 N3 G B 56 61.516 158.319 34.232 1.00 44.16 N
ATOM 24 C4 G B 56 60.633 157.361 33.883 1.00 44.67 C
ATOM 25 P A B 57 60.697 160.801 28.045 1.00 44.28 P
ATOM 26 OP1 A B 57 59.838 160.187 27.001 1.00 41.78 O
ATOM 27 OP2 A B 57 62.069 161.248 27.706 1.00 41.11 O
ATOM 28 O5' A B 57 59.906 162.048 28.640 1.00 44.42 O
TER
ATOM 2 P A A 57 60.697 160.801 28.045 1.00 44.28 P
ATOM 3 OP1 A A 57 59.838 160.187 27.001 1.00 41.78 O
ATOM 4 OP2 A A 57 62.069 161.248 27.706 1.00 41.11 O
ATOM 5 O5' A A 57 59.906 162.048 28.640 1.00 44.42 O
ATOM 6 C5' A A 57 60.319 162.662 29.871 1.00 44.77 C
ATOM 7 C4' A A 57 60.776 164.082 29.625 1.00 46.22 C
ATOM 8 O4' A A 57 61.228 164.649 30.886 1.00 46.29 O
ATOM 9 C3' A A 57 61.955 164.224 28.669 1.00 46.34 C
ATOM 10 O3' A A 57 61.902 165.513 28.047 1.00 46.03 O
ATOM 11 C2' A A 57 63.140 164.142 29.621 1.00 47.06 C
ATOM 12 O2' A A 57 64.319 164.711 29.104 1.00 50.46 O
ATOM 13 C1' A A 57 62.611 164.934 30.816 1.00 47.54 C
ATOM 14 N9 A A 57 63.213 164.575 32.103 1.00 50.61 N
ATOM 15 C8 A A 57 63.833 165.417 32.994 1.00 51.09 C
ATOM 16 N7 A A 57 64.277 164.817 34.070 1.00 51.07 N
ATOM 17 C5 A A 57 63.929 163.488 33.877 1.00 51.23 C
ATOM 18 C6 A A 57 64.135 162.338 34.653 1.00 51.55 C
ATOM 19 N6 A A 57 64.759 162.344 35.830 1.00 50.12 N
ATOM 20 N1 A A 57 63.674 161.164 34.170 1.00 52.46 N
ATOM 21 C2 A A 57 63.046 161.160 32.987 1.00 52.33 C
ATOM 22 N3 A A 57 62.792 162.173 32.166 1.00 51.03 N
ATOM 23 C4 A A 57 63.269 163.324 32.673 1.00 51.12 C
ATOM 24 P U A 58 61.831 165.639 26.445 1.00 44.41 P
ATOM 25 OP1 U A 58 62.778 164.670 25.834 1.00 40.93 O
ATOM 26 OP2 U A 58 61.961 167.083 26.126 1.00 44.76 O
ATOM 27 O5' U A 58 60.332 165.221 26.100 1.00 43.44 O
TER
ATOM 1 O3' C B 55 56.010 155.058 29.221 1.00 43.92 O
ATOM 2 P G B 56 57.574 154.881 28.888 1.00 46.91 P
ATOM 3 OP1 G B 56 57.720 154.887 27.407 1.00 48.10 O
ATOM 4 OP2 G B 56 58.061 153.714 29.668 1.00 45.23 O
ATOM 5 O5' G B 56 58.274 156.192 29.470 1.00 44.70 O
ATOM 6 C5' G B 56 57.883 157.508 29.029 1.00 44.78 C
ATOM 7 C4' G B 56 58.802 158.558 29.619 1.00 45.19 C
ATOM 8 O4' G B 56 58.804 158.447 31.069 1.00 45.61 O
ATOM 9 C3' G B 56 60.264 158.476 29.204 1.00 45.51 C
ATOM 10 O3' G B 56 60.816 159.789 29.288 1.00 45.75 O
ATOM 11 C2' G B 56 60.865 157.619 30.312 1.00 44.67 C
ATOM 12 O2' G B 56 62.255 157.822 30.444 1.00 43.22 O
ATOM 13 C1' G B 56 60.111 158.156 31.528 1.00 44.85 C
ATOM 14 N9 G B 56 59.995 157.246 32.667 1.00 45.15 N
ATOM 15 C8 G B 56 59.200 156.129 32.753 1.00 45.19 C
ATOM 16 N7 G B 56 59.261 155.544 33.918 1.00 45.35 N
ATOM 17 C5 G B 56 60.160 156.313 34.643 1.00 44.70 C
ATOM 18 C6 G B 56 60.620 156.174 35.977 1.00 43.25 C
ATOM 19 O6 G B 56 60.316 155.320 36.813 1.00 42.12 O
ATOM 20 N1 G B 56 61.526 157.170 36.309 1.00 43.07 N
ATOM 21 C2 G B 56 61.942 158.168 35.474 1.00 43.09 C
ATOM 22 N2 G B 56 62.843 159.015 35.984 1.00 42.42 N
ATOM 23 N3 G B 56 61.516 158.319 34.232 1.00 44.16 N
ATOM 24 C4 G B 56 60.633 157.361 33.883 1.00 44.67 C
ATOM 25 P A B 57 60.697 160.801 28.045 1.00 44.28 P
ATOM 26 OP1 A B 57 59.838 160.187 27.001 1.00 41.78 O
ATOM 27 OP2 A B 57 62.069 161.248 27.706 1.00 41.11 O
ATOM 28 O5' A B 57 59.906 162.048 28.640 1.00 44.42 O
TER
Atoms:
OP1: (59.838,160.187,27.001)
OP2: (62.069,161.248,27.706)
C3': (61.955,164.224,28.669)
C1': (62.611,164.934,30.816)
C5': (60.319,162.662,29.871)
O4': (61.228,164.649,30.886)
C8: (63.833,165.417,32.994)
O2': (64.319,164.711,29.104)
C6: (64.135,162.338,34.653)
C5: (63.929,163.488,33.877)
C4: (63.269,163.324,32.673)
P: (60.697,160.801,28.045)
C4': (60.776,164.082,29.625)
C2': (63.140,164.142,29.621)
C2: (63.046,161.160,32.987)
N1: (63.674,161.164,34.170)
N3: (62.792,162.173,32.166)
N6: (64.759,162.344,35.830)
N7: (64.277,164.817,34.070)
N9: (63.213,164.575,32.103)
O5': (59.906,162.048,28.640)
O3': (61.902,165.513,28.047)
OP2: (62.069,161.248,27.706)
C3': (61.955,164.224,28.669)
C1': (62.611,164.934,30.816)
C5': (60.319,162.662,29.871)
O4': (61.228,164.649,30.886)
C8: (63.833,165.417,32.994)
O2': (64.319,164.711,29.104)
C6: (64.135,162.338,34.653)
C5: (63.929,163.488,33.877)
C4: (63.269,163.324,32.673)
P: (60.697,160.801,28.045)
C4': (60.776,164.082,29.625)
C2': (63.140,164.142,29.621)
C2: (63.046,161.160,32.987)
N1: (63.674,161.164,34.170)
N3: (62.792,162.173,32.166)
N6: (64.759,162.344,35.830)
N7: (64.277,164.817,34.070)
N9: (63.213,164.575,32.103)
O5': (59.906,162.048,28.640)
O3': (61.902,165.513,28.047)
OP1: (57.720,154.887,27.407)
OP2: (58.061,153.714,29.668)
C3': (60.264,158.476,29.204)
C1': (60.111,158.156,31.528)
C5': (57.883,157.508,29.029)
O6: (60.316,155.320,36.813)
O4': (58.804,158.447,31.069)
C8: (59.200,156.129,32.753)
C2: (61.942,158.168,35.474)
C6: (60.620,156.174,35.977)
C5: (60.160,156.313,34.643)
C4: (60.633,157.361,33.883)
P: (57.574,154.881,28.888)
C4': (58.802,158.558,29.619)
C2': (60.865,157.619,30.312)
O2': (62.255,157.822,30.444)
N1: (61.526,157.170,36.309)
N2: (62.843,159.015,35.984)
N3: (61.516,158.319,34.232)
N7: (59.261,155.544,33.918)
N9: (59.995,157.246,32.667)
O5': (58.274,156.192,29.470)
O3': (60.816,159.789,29.288)
OP2: (58.061,153.714,29.668)
C3': (60.264,158.476,29.204)
C1': (60.111,158.156,31.528)
C5': (57.883,157.508,29.029)
O6: (60.316,155.320,36.813)
O4': (58.804,158.447,31.069)
C8: (59.200,156.129,32.753)
C2: (61.942,158.168,35.474)
C6: (60.620,156.174,35.977)
C5: (60.160,156.313,34.643)
C4: (60.633,157.361,33.883)
P: (57.574,154.881,28.888)
C4': (58.802,158.558,29.619)
C2': (60.865,157.619,30.312)
O2': (62.255,157.822,30.444)
N1: (61.526,157.170,36.309)
N2: (62.843,159.015,35.984)
N3: (61.516,158.319,34.232)
N7: (59.261,155.544,33.918)
N9: (59.995,157.246,32.667)
O5': (58.274,156.192,29.470)
O3': (60.816,159.789,29.288)
Image (generated by PyMOL):