Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A397:A398
Extra
PDB:
ATOM 1 O3' A A 396 97.041 91.326 14.226 1.00 71.90 O
ATOM 2 P U A 397 97.651 92.058 12.927 1.00 72.71 P
ATOM 3 OP1 U A 397 98.424 90.997 12.246 1.00 73.54 O
ATOM 4 OP2 U A 397 98.318 93.357 13.248 1.00 72.72 O
ATOM 5 O5' U A 397 96.391 92.386 12.015 1.00 72.52 O
ATOM 6 C5' U A 397 95.294 91.471 11.915 1.00 74.48 C
ATOM 7 C4' U A 397 94.041 92.229 11.564 1.00 75.63 C
ATOM 8 O4' U A 397 93.853 93.281 12.561 1.00 76.16 O
ATOM 9 C3' U A 397 94.109 92.946 10.215 1.00 75.70 C
ATOM 10 O3' U A 397 92.841 93.052 9.613 1.00 75.70 O
ATOM 11 C2' U A 397 94.543 94.349 10.595 1.00 76.29 C
ATOM 12 O2' U A 397 94.121 95.304 9.645 1.00 75.98 O
ATOM 13 C1' U A 397 93.795 94.536 11.909 1.00 76.51 C
ATOM 14 N1 U A 397 94.367 95.583 12.771 1.00 76.81 N
ATOM 15 C2 U A 397 93.596 96.718 12.978 1.00 76.52 C
ATOM 16 O2 U A 397 92.505 96.881 12.460 1.00 76.08 O
ATOM 17 N3 U A 397 94.157 97.656 13.806 1.00 76.39 N
ATOM 18 C4 U A 397 95.383 97.584 14.429 1.00 76.48 C
ATOM 19 O4 U A 397 95.693 98.453 15.239 1.00 76.43 O
ATOM 20 C5 U A 397 96.132 96.396 14.145 1.00 76.42 C
ATOM 21 C6 U A 397 95.610 95.457 13.350 1.00 76.77 C
ATOM 22 P A A 398 92.681 92.767 8.045 1.00 76.07 P
ATOM 23 OP1 A A 398 93.716 91.778 7.643 1.00 75.84 O
ATOM 24 OP2 A A 398 92.531 94.032 7.276 1.00 75.26 O
ATOM 25 O5' A A 398 91.287 92.017 8.011 1.00 76.85 O
TER
ATOM 1 O3' U B 397 92.841 93.052 9.613 1.00 75.70 O
ATOM 2 P A B 398 92.681 92.767 8.045 1.00 76.07 P
ATOM 3 OP1 A B 398 93.716 91.778 7.643 1.00 75.84 O
ATOM 4 OP2 A B 398 92.531 94.032 7.276 1.00 75.26 O
ATOM 5 O5' A B 398 91.287 92.017 8.011 1.00 76.85 O
ATOM 6 C5' A B 398 91.132 90.777 8.720 1.00 77.97 C
ATOM 7 C4' A B 398 89.683 90.392 8.774 1.00 78.82 C
ATOM 8 O4' A B 398 88.996 91.291 9.692 1.00 79.27 O
ATOM 9 C3' A B 398 88.962 90.520 7.430 1.00 78.86 C
ATOM 10 O3' A B 398 87.959 89.522 7.297 1.00 79.35 O
ATOM 11 C2' A B 398 88.305 91.891 7.543 1.00 78.65 C
ATOM 12 O2' A B 398 87.150 92.069 6.748 1.00 77.73 O
ATOM 13 C1' A B 398 87.920 91.903 9.014 1.00 79.63 C
ATOM 14 N9 A B 398 87.736 93.258 9.510 1.00 80.94 N
ATOM 15 C8 A B 398 88.663 94.250 9.714 1.00 81.39 C
ATOM 16 N7 A B 398 88.141 95.379 10.127 1.00 81.85 N
ATOM 17 C5 A B 398 86.781 95.104 10.215 1.00 82.32 C
ATOM 18 C6 A B 398 85.675 95.887 10.601 1.00 82.68 C
ATOM 19 N6 A B 398 85.771 97.160 10.994 1.00 81.86 N
ATOM 20 N1 A B 398 84.449 95.306 10.569 1.00 83.09 N
ATOM 21 C2 A B 398 84.354 94.024 10.178 1.00 82.85 C
ATOM 22 N3 A B 398 85.318 93.188 9.798 1.00 81.91 N
ATOM 23 C4 A B 398 86.521 93.798 9.841 1.00 81.85 C
ATOM 24 P A B 399 88.142 88.352 6.212 1.00 78.76 P
ATOM 25 OP1 A B 399 88.672 88.939 4.946 1.00 78.58 O
ATOM 26 OP2 A B 399 86.878 87.564 6.182 1.00 78.47 O
ATOM 27 O5' A B 399 89.292 87.455 6.848 1.00 78.96 O
TER
ATOM 2 P U A 397 97.651 92.058 12.927 1.00 72.71 P
ATOM 3 OP1 U A 397 98.424 90.997 12.246 1.00 73.54 O
ATOM 4 OP2 U A 397 98.318 93.357 13.248 1.00 72.72 O
ATOM 5 O5' U A 397 96.391 92.386 12.015 1.00 72.52 O
ATOM 6 C5' U A 397 95.294 91.471 11.915 1.00 74.48 C
ATOM 7 C4' U A 397 94.041 92.229 11.564 1.00 75.63 C
ATOM 8 O4' U A 397 93.853 93.281 12.561 1.00 76.16 O
ATOM 9 C3' U A 397 94.109 92.946 10.215 1.00 75.70 C
ATOM 10 O3' U A 397 92.841 93.052 9.613 1.00 75.70 O
ATOM 11 C2' U A 397 94.543 94.349 10.595 1.00 76.29 C
ATOM 12 O2' U A 397 94.121 95.304 9.645 1.00 75.98 O
ATOM 13 C1' U A 397 93.795 94.536 11.909 1.00 76.51 C
ATOM 14 N1 U A 397 94.367 95.583 12.771 1.00 76.81 N
ATOM 15 C2 U A 397 93.596 96.718 12.978 1.00 76.52 C
ATOM 16 O2 U A 397 92.505 96.881 12.460 1.00 76.08 O
ATOM 17 N3 U A 397 94.157 97.656 13.806 1.00 76.39 N
ATOM 18 C4 U A 397 95.383 97.584 14.429 1.00 76.48 C
ATOM 19 O4 U A 397 95.693 98.453 15.239 1.00 76.43 O
ATOM 20 C5 U A 397 96.132 96.396 14.145 1.00 76.42 C
ATOM 21 C6 U A 397 95.610 95.457 13.350 1.00 76.77 C
ATOM 22 P A A 398 92.681 92.767 8.045 1.00 76.07 P
ATOM 23 OP1 A A 398 93.716 91.778 7.643 1.00 75.84 O
ATOM 24 OP2 A A 398 92.531 94.032 7.276 1.00 75.26 O
ATOM 25 O5' A A 398 91.287 92.017 8.011 1.00 76.85 O
TER
ATOM 1 O3' U B 397 92.841 93.052 9.613 1.00 75.70 O
ATOM 2 P A B 398 92.681 92.767 8.045 1.00 76.07 P
ATOM 3 OP1 A B 398 93.716 91.778 7.643 1.00 75.84 O
ATOM 4 OP2 A B 398 92.531 94.032 7.276 1.00 75.26 O
ATOM 5 O5' A B 398 91.287 92.017 8.011 1.00 76.85 O
ATOM 6 C5' A B 398 91.132 90.777 8.720 1.00 77.97 C
ATOM 7 C4' A B 398 89.683 90.392 8.774 1.00 78.82 C
ATOM 8 O4' A B 398 88.996 91.291 9.692 1.00 79.27 O
ATOM 9 C3' A B 398 88.962 90.520 7.430 1.00 78.86 C
ATOM 10 O3' A B 398 87.959 89.522 7.297 1.00 79.35 O
ATOM 11 C2' A B 398 88.305 91.891 7.543 1.00 78.65 C
ATOM 12 O2' A B 398 87.150 92.069 6.748 1.00 77.73 O
ATOM 13 C1' A B 398 87.920 91.903 9.014 1.00 79.63 C
ATOM 14 N9 A B 398 87.736 93.258 9.510 1.00 80.94 N
ATOM 15 C8 A B 398 88.663 94.250 9.714 1.00 81.39 C
ATOM 16 N7 A B 398 88.141 95.379 10.127 1.00 81.85 N
ATOM 17 C5 A B 398 86.781 95.104 10.215 1.00 82.32 C
ATOM 18 C6 A B 398 85.675 95.887 10.601 1.00 82.68 C
ATOM 19 N6 A B 398 85.771 97.160 10.994 1.00 81.86 N
ATOM 20 N1 A B 398 84.449 95.306 10.569 1.00 83.09 N
ATOM 21 C2 A B 398 84.354 94.024 10.178 1.00 82.85 C
ATOM 22 N3 A B 398 85.318 93.188 9.798 1.00 81.91 N
ATOM 23 C4 A B 398 86.521 93.798 9.841 1.00 81.85 C
ATOM 24 P A B 399 88.142 88.352 6.212 1.00 78.76 P
ATOM 25 OP1 A B 399 88.672 88.939 4.946 1.00 78.58 O
ATOM 26 OP2 A B 399 86.878 87.564 6.182 1.00 78.47 O
ATOM 27 O5' A B 399 89.292 87.455 6.848 1.00 78.96 O
TER
Atoms:
C4: (95.383,97.584,14.429)
N3: (94.157,97.656,13.806)
OP1: (98.424,90.997,12.246)
OP2: (98.318,93.357,13.248)
C2: (93.596,96.718,12.978)
C1': (93.795,94.536,11.909)
C3': (94.109,92.946,10.215)
O5': (96.391,92.386,12.015)
O4': (93.853,93.281,12.561)
C5': (95.294,91.471,11.915)
P: (97.651,92.058,12.927)
C4': (94.041,92.229,11.564)
C2': (94.543,94.349,10.595)
O2': (94.121,95.304,9.645)
N1: (94.367,95.583,12.771)
O4: (95.693,98.453,15.239)
O2: (92.505,96.881,12.460)
C6: (95.610,95.457,13.350)
C5: (96.132,96.396,14.145)
O3': (92.841,93.052,9.613)
N3: (94.157,97.656,13.806)
OP1: (98.424,90.997,12.246)
OP2: (98.318,93.357,13.248)
C2: (93.596,96.718,12.978)
C1': (93.795,94.536,11.909)
C3': (94.109,92.946,10.215)
O5': (96.391,92.386,12.015)
O4': (93.853,93.281,12.561)
C5': (95.294,91.471,11.915)
P: (97.651,92.058,12.927)
C4': (94.041,92.229,11.564)
C2': (94.543,94.349,10.595)
O2': (94.121,95.304,9.645)
N1: (94.367,95.583,12.771)
O4: (95.693,98.453,15.239)
O2: (92.505,96.881,12.460)
C6: (95.610,95.457,13.350)
C5: (96.132,96.396,14.145)
O3': (92.841,93.052,9.613)
OP1: (93.716,91.778,7.643)
OP2: (92.531,94.032,7.276)
C3': (88.962,90.520,7.430)
C1': (87.920,91.903,9.014)
C5': (91.132,90.777,8.720)
O4': (88.996,91.291,9.692)
C8: (88.663,94.250,9.714)
O2': (87.150,92.069,6.748)
C6: (85.675,95.887,10.601)
C5: (86.781,95.104,10.215)
C4: (86.521,93.798,9.841)
P: (92.681,92.767,8.045)
C4': (89.683,90.392,8.774)
C2': (88.305,91.891,7.543)
C2: (84.354,94.024,10.178)
N1: (84.449,95.306,10.569)
N3: (85.318,93.188,9.798)
N6: (85.771,97.160,10.994)
N7: (88.141,95.379,10.127)
N9: (87.736,93.258,9.510)
O5': (91.287,92.017,8.011)
O3': (87.959,89.522,7.297)
OP2: (92.531,94.032,7.276)
C3': (88.962,90.520,7.430)
C1': (87.920,91.903,9.014)
C5': (91.132,90.777,8.720)
O4': (88.996,91.291,9.692)
C8: (88.663,94.250,9.714)
O2': (87.150,92.069,6.748)
C6: (85.675,95.887,10.601)
C5: (86.781,95.104,10.215)
C4: (86.521,93.798,9.841)
P: (92.681,92.767,8.045)
C4': (89.683,90.392,8.774)
C2': (88.305,91.891,7.543)
C2: (84.354,94.024,10.178)
N1: (84.449,95.306,10.569)
N3: (85.318,93.188,9.798)
N6: (85.771,97.160,10.994)
N7: (88.141,95.379,10.127)
N9: (87.736,93.258,9.510)
O5': (91.287,92.017,8.011)
O3': (87.959,89.522,7.297)
Image (generated by PyMOL):