ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:035:034

Extra

PDB:
ATOM 1 O3' G A 34 69.177 142.317 24.865 1.00 32.04 O
ATOM 2 P A A 35 69.853 142.277 23.403 1.00 31.09 P
ATOM 3 OP1 A A 35 68.822 142.618 22.393 1.00 29.92 O
ATOM 4 OP2 A A 35 70.605 141.011 23.263 1.00 32.27 O
ATOM 5 O5' A A 35 70.929 143.454 23.466 1.00 33.08 O
ATOM 6 C5' A A 35 71.904 143.507 24.528 1.00 32.23 C
ATOM 7 C4' A A 35 73.046 144.432 24.168 1.00 31.70 C
ATOM 8 O4' A A 35 73.948 144.530 25.301 1.00 32.21 O
ATOM 9 C3' A A 35 73.921 144.002 22.998 1.00 32.53 C
ATOM 10 O3' A A 35 74.500 145.176 22.445 1.00 36.61 O
ATOM 11 C2' A A 35 75.023 143.208 23.682 1.00 31.20 C
ATOM 12 O2' A A 35 76.217 143.166 22.929 1.00 27.74 O
ATOM 13 C1' A A 35 75.227 144.042 24.940 1.00 32.11 C
ATOM 14 N9 A A 35 75.782 143.329 26.089 1.00 33.46 N
ATOM 15 C8 A A 35 76.851 143.727 26.842 1.00 33.87 C
ATOM 16 N7 A A 35 77.095 142.952 27.865 1.00 35.33 N
ATOM 17 C5 A A 35 76.127 141.963 27.774 1.00 34.49 C
ATOM 18 C6 A A 35 75.835 140.852 28.579 1.00 33.50 C
ATOM 19 N6 A A 35 76.503 140.549 29.696 1.00 30.17 N
ATOM 20 N1 A A 35 74.812 140.057 28.200 1.00 34.01 N
ATOM 21 C2 A A 35 74.132 140.371 27.095 1.00 33.46 C
ATOM 22 N3 A A 35 74.302 141.393 26.266 1.00 34.94 N
ATOM 23 C4 A A 35 75.328 142.165 26.668 1.00 34.50 C
ATOM 24 P U A 36 74.339 145.495 20.883 1.00 38.40 P
ATOM 25 OP1 U A 36 74.455 144.216 20.130 1.00 38.90 O
ATOM 26 OP2 U A 36 75.289 146.595 20.604 1.00 38.11 O
ATOM 27 O5' U A 36 72.853 146.055 20.765 1.00 37.06 O
TER

ATOM 1 O3' U B 33 64.038 139.217 24.907 1.00 36.86 O
ATOM 2 P G B 34 65.222 139.703 23.946 1.00 37.76 P
ATOM 3 OP1 G B 34 64.781 141.018 23.405 1.00 34.99 O
ATOM 4 OP2 G B 34 65.576 138.597 23.012 1.00 34.13 O
ATOM 5 O5' G B 34 66.443 139.920 24.951 1.00 36.43 O
ATOM 6 C5' G B 34 66.430 140.998 25.912 1.00 33.49 C
ATOM 7 C4' G B 34 67.795 141.173 26.533 1.00 32.08 C
ATOM 8 O4' G B 34 68.054 140.117 27.492 1.00 32.77 O
ATOM 9 C3' G B 34 68.985 141.104 25.593 1.00 31.52 C
ATOM 10 O3' G B 34 69.177 142.317 24.865 1.00 32.04 O
ATOM 11 C2' G B 34 70.124 140.807 26.561 1.00 31.03 C
ATOM 12 O2' G B 34 70.550 141.945 27.280 1.00 30.25 O
ATOM 13 C1' G B 34 69.449 139.835 27.531 1.00 31.44 C
ATOM 14 N9 G B 34 69.654 138.448 27.125 1.00 30.72 N
ATOM 15 C8 G B 34 68.778 137.666 26.413 1.00 31.91 C
ATOM 16 N7 G B 34 69.261 136.490 26.125 1.00 31.45 N
ATOM 17 C5 G B 34 70.529 136.490 26.687 1.00 29.24 C
ATOM 18 C6 G B 34 71.536 135.497 26.666 1.00 29.70 C
ATOM 19 O6 G B 34 71.524 134.392 26.100 1.00 31.83 O
ATOM 20 N1 G B 34 72.655 135.893 27.379 1.00 28.72 N
ATOM 21 C2 G B 34 72.796 137.090 28.015 1.00 28.74 C
ATOM 22 N2 G B 34 73.947 137.253 28.666 1.00 30.62 N
ATOM 23 N3 G B 34 71.879 138.044 28.017 1.00 28.24 N
ATOM 24 C4 G B 34 70.776 137.677 27.337 1.00 28.76 C
ATOM 25 P A B 35 69.853 142.277 23.403 1.00 31.09 P
ATOM 26 OP1 A B 35 68.822 142.618 22.393 1.00 29.92 O
ATOM 27 OP2 A B 35 70.605 141.011 23.263 1.00 32.27 O
ATOM 28 O5' A B 35 70.929 143.454 23.466 1.00 33.08 O
TER

Atoms:
OP1: (68.822,142.618,22.393)
OP2: (70.605,141.011,23.263)
C3': (73.921,144.002,22.998)
C1': (75.227,144.042,24.940)
C5': (71.904,143.507,24.528)
O4': (73.948,144.530,25.301)
C8: (76.851,143.727,26.842)
O2': (76.217,143.166,22.929)
C6: (75.835,140.852,28.579)
C5: (76.127,141.963,27.774)
C4: (75.328,142.165,26.668)
P: (69.853,142.277,23.403)
C4': (73.046,144.432,24.168)
C2': (75.023,143.208,23.682)
C2: (74.132,140.371,27.095)
N1: (74.812,140.057,28.200)
N3: (74.302,141.393,26.266)
N6: (76.503,140.549,29.696)
N7: (77.095,142.952,27.865)
N9: (75.782,143.329,26.089)
O5': (70.929,143.454,23.466)
O3': (74.500,145.176,22.445)
OP1: (64.781,141.018,23.405)
OP2: (65.576,138.597,23.012)
C3': (68.985,141.104,25.593)
C1': (69.449,139.835,27.531)
C5': (66.430,140.998,25.912)
O6: (71.524,134.392,26.100)
O4': (68.054,140.117,27.492)
C8: (68.778,137.666,26.413)
C2: (72.796,137.090,28.015)
C6: (71.536,135.497,26.666)
C5: (70.529,136.490,26.687)
C4: (70.776,137.677,27.337)
P: (65.222,139.703,23.946)
C4': (67.795,141.173,26.533)
C2': (70.124,140.807,26.561)
O2': (70.550,141.945,27.280)
N1: (72.655,135.893,27.379)
N2: (73.947,137.253,28.666)
N3: (71.879,138.044,28.017)
N7: (69.261,136.490,26.125)
N9: (69.654,138.448,27.125)
O5': (66.443,139.920,24.951)
O3': (69.177,142.317,24.865)
Image (generated by PyMOL):
PyMOL image
show in jmol