Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A272:A273
Extra
PDB:
ATOM 1 O3' U A 271 65.035 104.321 -8.109 1.00125.96 O
ATOM 2 P C A 272 63.878 103.208 -7.944 1.00126.12 P
ATOM 3 OP1 C A 272 64.540 101.875 -7.998 1.00126.00 O
ATOM 4 OP2 C A 272 62.775 103.521 -8.895 1.00126.41 O
ATOM 5 O5' C A 272 63.327 103.421 -6.465 1.00124.54 O
ATOM 6 C5' C A 272 63.963 104.345 -5.570 1.00121.90 C
ATOM 7 C4' C A 272 63.187 105.637 -5.523 1.00120.34 C
ATOM 8 O4' C A 272 63.288 106.328 -6.802 1.00120.59 O
ATOM 9 C3' C A 272 61.692 105.494 -5.231 1.00118.47 C
ATOM 10 O3' C A 272 61.213 106.595 -4.444 1.00115.09 O
ATOM 11 C2' C A 272 61.089 105.608 -6.634 1.00118.89 C
ATOM 12 O2' C A 272 59.733 106.010 -6.654 1.00118.99 O
ATOM 13 C1' C A 272 61.993 106.688 -7.227 1.00119.60 C
ATOM 14 N1 C A 272 62.007 106.922 -8.687 1.00119.58 N
ATOM 15 C2 C A 272 62.706 108.043 -9.179 1.00119.64 C
ATOM 16 O2 C A 272 63.311 108.780 -8.385 1.00119.63 O
ATOM 17 N3 C A 272 62.700 108.293 -10.505 1.00119.88 N
ATOM 18 C4 C A 272 62.038 107.483 -11.334 1.00120.03 C
ATOM 19 N4 C A 272 62.043 107.786 -12.633 1.00120.11 N
ATOM 20 C5 C A 272 61.338 106.331 -10.868 1.00119.66 C
ATOM 21 C6 C A 272 61.350 106.089 -9.551 1.00119.51 C
ATOM 22 P A A 273 62.171 107.310 -3.355 1.00112.25 P
ATOM 23 OP1 A A 273 61.356 107.626 -2.151 1.00112.59 O
ATOM 24 OP2 A A 273 62.887 108.405 -4.064 1.00111.26 O
ATOM 25 O5' A A 273 63.257 106.213 -2.956 1.00109.28 O
TER
ATOM 1 O3' C B 272 61.213 106.595 -4.444 1.00115.09 O
ATOM 2 P A B 273 62.171 107.310 -3.355 1.00112.25 P
ATOM 3 OP1 A B 273 61.356 107.626 -2.151 1.00112.59 O
ATOM 4 OP2 A B 273 62.887 108.405 -4.064 1.00111.26 O
ATOM 5 O5' A B 273 63.257 106.213 -2.956 1.00109.28 O
ATOM 6 C5' A B 273 62.970 105.174 -1.999 1.00103.93 C
ATOM 7 C4' A B 273 64.225 104.834 -1.223 1.00100.04 C
ATOM 8 O4' A B 273 65.264 104.425 -2.160 1.00 99.08 O
ATOM 9 C3' A B 273 64.854 106.001 -0.472 1.00 97.74 C
ATOM 10 O3' A B 273 64.229 106.231 0.789 1.00 95.78 O
ATOM 11 C2' A B 273 66.307 105.563 -0.359 1.00 96.72 C
ATOM 12 O2' A B 273 66.518 104.592 0.650 1.00 96.04 O
ATOM 13 C1' A B 273 66.526 104.925 -1.732 1.00 96.16 C
ATOM 14 N9 A B 273 67.016 105.874 -2.740 1.00 94.12 N
ATOM 15 C8 A B 273 66.316 106.443 -3.783 1.00 93.73 C
ATOM 16 N7 A B 273 67.031 107.258 -4.519 1.00 93.20 N
ATOM 17 C5 A B 273 68.286 107.228 -3.926 1.00 92.36 C
ATOM 18 C6 A B 273 69.496 107.878 -4.238 1.00 91.97 C
ATOM 19 N6 A B 273 69.648 108.714 -5.268 1.00 91.46 N
ATOM 20 N1 A B 273 70.559 107.633 -3.445 1.00 91.82 N
ATOM 21 C2 A B 273 70.410 106.791 -2.416 1.00 91.91 C
ATOM 22 N3 A B 273 69.331 106.118 -2.024 1.00 92.07 N
ATOM 23 C4 A B 273 68.291 106.382 -2.830 1.00 92.51 C
ATOM 24 P U B 274 63.962 107.740 1.286 1.00 94.65 P
ATOM 25 OP1 U B 274 63.218 107.661 2.568 1.00 94.69 O
ATOM 26 OP2 U B 274 63.397 108.526 0.157 1.00 94.33 O
ATOM 27 O5' U B 274 65.413 108.302 1.608 1.00 92.02 O
TER
ATOM 2 P C A 272 63.878 103.208 -7.944 1.00126.12 P
ATOM 3 OP1 C A 272 64.540 101.875 -7.998 1.00126.00 O
ATOM 4 OP2 C A 272 62.775 103.521 -8.895 1.00126.41 O
ATOM 5 O5' C A 272 63.327 103.421 -6.465 1.00124.54 O
ATOM 6 C5' C A 272 63.963 104.345 -5.570 1.00121.90 C
ATOM 7 C4' C A 272 63.187 105.637 -5.523 1.00120.34 C
ATOM 8 O4' C A 272 63.288 106.328 -6.802 1.00120.59 O
ATOM 9 C3' C A 272 61.692 105.494 -5.231 1.00118.47 C
ATOM 10 O3' C A 272 61.213 106.595 -4.444 1.00115.09 O
ATOM 11 C2' C A 272 61.089 105.608 -6.634 1.00118.89 C
ATOM 12 O2' C A 272 59.733 106.010 -6.654 1.00118.99 O
ATOM 13 C1' C A 272 61.993 106.688 -7.227 1.00119.60 C
ATOM 14 N1 C A 272 62.007 106.922 -8.687 1.00119.58 N
ATOM 15 C2 C A 272 62.706 108.043 -9.179 1.00119.64 C
ATOM 16 O2 C A 272 63.311 108.780 -8.385 1.00119.63 O
ATOM 17 N3 C A 272 62.700 108.293 -10.505 1.00119.88 N
ATOM 18 C4 C A 272 62.038 107.483 -11.334 1.00120.03 C
ATOM 19 N4 C A 272 62.043 107.786 -12.633 1.00120.11 N
ATOM 20 C5 C A 272 61.338 106.331 -10.868 1.00119.66 C
ATOM 21 C6 C A 272 61.350 106.089 -9.551 1.00119.51 C
ATOM 22 P A A 273 62.171 107.310 -3.355 1.00112.25 P
ATOM 23 OP1 A A 273 61.356 107.626 -2.151 1.00112.59 O
ATOM 24 OP2 A A 273 62.887 108.405 -4.064 1.00111.26 O
ATOM 25 O5' A A 273 63.257 106.213 -2.956 1.00109.28 O
TER
ATOM 1 O3' C B 272 61.213 106.595 -4.444 1.00115.09 O
ATOM 2 P A B 273 62.171 107.310 -3.355 1.00112.25 P
ATOM 3 OP1 A B 273 61.356 107.626 -2.151 1.00112.59 O
ATOM 4 OP2 A B 273 62.887 108.405 -4.064 1.00111.26 O
ATOM 5 O5' A B 273 63.257 106.213 -2.956 1.00109.28 O
ATOM 6 C5' A B 273 62.970 105.174 -1.999 1.00103.93 C
ATOM 7 C4' A B 273 64.225 104.834 -1.223 1.00100.04 C
ATOM 8 O4' A B 273 65.264 104.425 -2.160 1.00 99.08 O
ATOM 9 C3' A B 273 64.854 106.001 -0.472 1.00 97.74 C
ATOM 10 O3' A B 273 64.229 106.231 0.789 1.00 95.78 O
ATOM 11 C2' A B 273 66.307 105.563 -0.359 1.00 96.72 C
ATOM 12 O2' A B 273 66.518 104.592 0.650 1.00 96.04 O
ATOM 13 C1' A B 273 66.526 104.925 -1.732 1.00 96.16 C
ATOM 14 N9 A B 273 67.016 105.874 -2.740 1.00 94.12 N
ATOM 15 C8 A B 273 66.316 106.443 -3.783 1.00 93.73 C
ATOM 16 N7 A B 273 67.031 107.258 -4.519 1.00 93.20 N
ATOM 17 C5 A B 273 68.286 107.228 -3.926 1.00 92.36 C
ATOM 18 C6 A B 273 69.496 107.878 -4.238 1.00 91.97 C
ATOM 19 N6 A B 273 69.648 108.714 -5.268 1.00 91.46 N
ATOM 20 N1 A B 273 70.559 107.633 -3.445 1.00 91.82 N
ATOM 21 C2 A B 273 70.410 106.791 -2.416 1.00 91.91 C
ATOM 22 N3 A B 273 69.331 106.118 -2.024 1.00 92.07 N
ATOM 23 C4 A B 273 68.291 106.382 -2.830 1.00 92.51 C
ATOM 24 P U B 274 63.962 107.740 1.286 1.00 94.65 P
ATOM 25 OP1 U B 274 63.218 107.661 2.568 1.00 94.69 O
ATOM 26 OP2 U B 274 63.397 108.526 0.157 1.00 94.33 O
ATOM 27 O5' U B 274 65.413 108.302 1.608 1.00 92.02 O
TER
Atoms:
C2: (62.706,108.043,-9.179)
OP1: (64.540,101.875,-7.998)
OP2: (62.775,103.521,-8.895)
C4: (62.038,107.483,-11.334)
O5': (63.327,103.421,-6.465)
C3': (61.692,105.494,-5.231)
C1': (61.993,106.688,-7.227)
O4': (63.288,106.328,-6.802)
C5': (63.963,104.345,-5.570)
P: (63.878,103.208,-7.944)
O2: (63.311,108.780,-8.385)
C4': (63.187,105.637,-5.523)
C2': (61.089,105.608,-6.634)
O2': (59.733,106.010,-6.654)
N1: (62.007,106.922,-8.687)
N3: (62.700,108.293,-10.505)
N4: (62.043,107.786,-12.633)
C6: (61.350,106.089,-9.551)
C5: (61.338,106.331,-10.868)
O3': (61.213,106.595,-4.444)
OP1: (64.540,101.875,-7.998)
OP2: (62.775,103.521,-8.895)
C4: (62.038,107.483,-11.334)
O5': (63.327,103.421,-6.465)
C3': (61.692,105.494,-5.231)
C1': (61.993,106.688,-7.227)
O4': (63.288,106.328,-6.802)
C5': (63.963,104.345,-5.570)
P: (63.878,103.208,-7.944)
O2: (63.311,108.780,-8.385)
C4': (63.187,105.637,-5.523)
C2': (61.089,105.608,-6.634)
O2': (59.733,106.010,-6.654)
N1: (62.007,106.922,-8.687)
N3: (62.700,108.293,-10.505)
N4: (62.043,107.786,-12.633)
C6: (61.350,106.089,-9.551)
C5: (61.338,106.331,-10.868)
O3': (61.213,106.595,-4.444)
OP1: (61.356,107.626,-2.151)
OP2: (62.887,108.405,-4.064)
C3': (64.854,106.001,-0.472)
C1': (66.526,104.925,-1.732)
C5': (62.970,105.174,-1.999)
O4': (65.264,104.425,-2.160)
C8: (66.316,106.443,-3.783)
O2': (66.518,104.592,0.650)
C6: (69.496,107.878,-4.238)
C5: (68.286,107.228,-3.926)
C4: (68.291,106.382,-2.830)
P: (62.171,107.310,-3.355)
C4': (64.225,104.834,-1.223)
C2': (66.307,105.563,-0.359)
C2: (70.410,106.791,-2.416)
N1: (70.559,107.633,-3.445)
N3: (69.331,106.118,-2.024)
N6: (69.648,108.714,-5.268)
N7: (67.031,107.258,-4.519)
N9: (67.016,105.874,-2.740)
O5': (63.257,106.213,-2.956)
O3': (64.229,106.231,0.789)
OP2: (62.887,108.405,-4.064)
C3': (64.854,106.001,-0.472)
C1': (66.526,104.925,-1.732)
C5': (62.970,105.174,-1.999)
O4': (65.264,104.425,-2.160)
C8: (66.316,106.443,-3.783)
O2': (66.518,104.592,0.650)
C6: (69.496,107.878,-4.238)
C5: (68.286,107.228,-3.926)
C4: (68.291,106.382,-2.830)
P: (62.171,107.310,-3.355)
C4': (64.225,104.834,-1.223)
C2': (66.307,105.563,-0.359)
C2: (70.410,106.791,-2.416)
N1: (70.559,107.633,-3.445)
N3: (69.331,106.118,-2.024)
N6: (69.648,108.714,-5.268)
N7: (67.031,107.258,-4.519)
N9: (67.016,105.874,-2.740)
O5': (63.257,106.213,-2.956)
O3': (64.229,106.231,0.789)
Image (generated by PyMOL):