Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 79.142 104.152 -0.149 1.00 41.99 O
ATOM 2 P U A 258 77.663 104.117 0.483 1.00 42.79 P
ATOM 3 OP1 U A 258 76.978 102.895 -0.007 1.00 44.87 O
ATOM 4 OP2 U A 258 77.016 105.439 0.289 1.00 41.80 O
ATOM 5 O5' U A 258 77.948 103.921 2.035 1.00 43.98 O
ATOM 6 C5' U A 258 78.640 102.757 2.503 1.00 46.41 C
ATOM 7 C4' U A 258 78.945 102.883 3.975 1.00 48.08 C
ATOM 8 O4' U A 258 80.012 103.855 4.176 1.00 45.65 O
ATOM 9 C3' U A 258 77.779 103.340 4.854 1.00 48.99 C
ATOM 10 O3' U A 258 77.850 102.659 6.106 1.00 53.34 O
ATOM 11 C2' U A 258 78.085 104.824 5.050 1.00 46.54 C
ATOM 12 O2' U A 258 77.508 105.381 6.215 1.00 45.73 O
ATOM 13 C1' U A 258 79.605 104.774 5.162 1.00 43.63 C
ATOM 14 N1 U A 258 80.376 106.022 5.027 1.00 39.14 N
ATOM 15 C2 U A 258 81.700 105.984 5.428 1.00 37.67 C
ATOM 16 O2 U A 258 82.251 104.960 5.785 1.00 38.25 O
ATOM 17 N3 U A 258 82.358 107.185 5.386 1.00 37.24 N
ATOM 18 C4 U A 258 81.852 108.395 4.973 1.00 39.12 C
ATOM 19 O4 U A 258 82.511 109.417 5.173 1.00 40.01 O
ATOM 20 C5 U A 258 80.493 108.347 4.512 1.00 38.49 C
ATOM 21 C6 U A 258 79.817 107.191 4.558 1.00 38.58 C
ATOM 22 P C A 259 76.513 102.049 6.762 1.00 57.15 P
ATOM 23 OP1 C A 259 75.398 103.030 6.678 1.00 55.27 O
ATOM 24 OP2 C A 259 76.927 101.515 8.087 1.00 57.80 O
ATOM 25 O5' C A 259 76.132 100.820 5.825 1.00 58.61 O
TER
ATOM 1 O3' C B 227 77.121 112.716 4.363 1.00 36.42 O
ATOM 2 P C B 228 78.580 112.370 3.778 1.00 37.06 P
ATOM 3 OP1 C B 228 78.734 113.202 2.562 1.00 40.01 O
ATOM 4 OP2 C B 228 78.744 110.899 3.678 1.00 38.86 O
ATOM 5 O5' C B 228 79.565 112.908 4.908 1.00 35.60 O
ATOM 6 C5' C B 228 80.938 112.500 4.954 1.00 34.93 C
ATOM 7 C4' C B 228 81.526 112.797 6.314 1.00 35.36 C
ATOM 8 O4' C B 228 80.840 112.025 7.336 1.00 34.96 O
ATOM 9 C3' C B 228 82.986 112.404 6.455 1.00 36.16 C
ATOM 10 O3' C B 228 83.806 113.466 5.983 1.00 35.17 O
ATOM 11 C2' C B 228 83.139 112.202 7.956 1.00 36.05 C
ATOM 12 O2' C B 228 83.319 113.429 8.639 1.00 39.27 O
ATOM 13 C1' C B 228 81.770 111.614 8.330 1.00 35.39 C
ATOM 14 N1 C B 228 81.701 110.139 8.481 1.00 33.65 N
ATOM 15 C2 C B 228 82.683 109.470 9.250 1.00 34.45 C
ATOM 16 O2 C B 228 83.585 110.131 9.790 1.00 36.57 O
ATOM 17 N3 C B 228 82.615 108.124 9.384 1.00 32.38 N
ATOM 18 C4 C B 228 81.624 107.445 8.797 1.00 34.80 C
ATOM 19 N4 C B 228 81.601 106.119 8.941 1.00 31.83 N
ATOM 20 C5 C B 228 80.612 108.094 8.027 1.00 33.43 C
ATOM 21 C6 C B 228 80.691 109.426 7.894 1.00 34.54 C
ATOM 22 P A B 229 85.191 113.147 5.238 1.00 36.57 P
ATOM 23 OP1 A B 229 85.923 114.439 5.150 1.00 36.78 O
ATOM 24 OP2 A B 229 84.883 112.386 3.997 1.00 37.82 O
ATOM 25 O5' A B 229 85.977 112.176 6.223 1.00 35.57 O
TER
ATOM 2 P U A 258 77.663 104.117 0.483 1.00 42.79 P
ATOM 3 OP1 U A 258 76.978 102.895 -0.007 1.00 44.87 O
ATOM 4 OP2 U A 258 77.016 105.439 0.289 1.00 41.80 O
ATOM 5 O5' U A 258 77.948 103.921 2.035 1.00 43.98 O
ATOM 6 C5' U A 258 78.640 102.757 2.503 1.00 46.41 C
ATOM 7 C4' U A 258 78.945 102.883 3.975 1.00 48.08 C
ATOM 8 O4' U A 258 80.012 103.855 4.176 1.00 45.65 O
ATOM 9 C3' U A 258 77.779 103.340 4.854 1.00 48.99 C
ATOM 10 O3' U A 258 77.850 102.659 6.106 1.00 53.34 O
ATOM 11 C2' U A 258 78.085 104.824 5.050 1.00 46.54 C
ATOM 12 O2' U A 258 77.508 105.381 6.215 1.00 45.73 O
ATOM 13 C1' U A 258 79.605 104.774 5.162 1.00 43.63 C
ATOM 14 N1 U A 258 80.376 106.022 5.027 1.00 39.14 N
ATOM 15 C2 U A 258 81.700 105.984 5.428 1.00 37.67 C
ATOM 16 O2 U A 258 82.251 104.960 5.785 1.00 38.25 O
ATOM 17 N3 U A 258 82.358 107.185 5.386 1.00 37.24 N
ATOM 18 C4 U A 258 81.852 108.395 4.973 1.00 39.12 C
ATOM 19 O4 U A 258 82.511 109.417 5.173 1.00 40.01 O
ATOM 20 C5 U A 258 80.493 108.347 4.512 1.00 38.49 C
ATOM 21 C6 U A 258 79.817 107.191 4.558 1.00 38.58 C
ATOM 22 P C A 259 76.513 102.049 6.762 1.00 57.15 P
ATOM 23 OP1 C A 259 75.398 103.030 6.678 1.00 55.27 O
ATOM 24 OP2 C A 259 76.927 101.515 8.087 1.00 57.80 O
ATOM 25 O5' C A 259 76.132 100.820 5.825 1.00 58.61 O
TER
ATOM 1 O3' C B 227 77.121 112.716 4.363 1.00 36.42 O
ATOM 2 P C B 228 78.580 112.370 3.778 1.00 37.06 P
ATOM 3 OP1 C B 228 78.734 113.202 2.562 1.00 40.01 O
ATOM 4 OP2 C B 228 78.744 110.899 3.678 1.00 38.86 O
ATOM 5 O5' C B 228 79.565 112.908 4.908 1.00 35.60 O
ATOM 6 C5' C B 228 80.938 112.500 4.954 1.00 34.93 C
ATOM 7 C4' C B 228 81.526 112.797 6.314 1.00 35.36 C
ATOM 8 O4' C B 228 80.840 112.025 7.336 1.00 34.96 O
ATOM 9 C3' C B 228 82.986 112.404 6.455 1.00 36.16 C
ATOM 10 O3' C B 228 83.806 113.466 5.983 1.00 35.17 O
ATOM 11 C2' C B 228 83.139 112.202 7.956 1.00 36.05 C
ATOM 12 O2' C B 228 83.319 113.429 8.639 1.00 39.27 O
ATOM 13 C1' C B 228 81.770 111.614 8.330 1.00 35.39 C
ATOM 14 N1 C B 228 81.701 110.139 8.481 1.00 33.65 N
ATOM 15 C2 C B 228 82.683 109.470 9.250 1.00 34.45 C
ATOM 16 O2 C B 228 83.585 110.131 9.790 1.00 36.57 O
ATOM 17 N3 C B 228 82.615 108.124 9.384 1.00 32.38 N
ATOM 18 C4 C B 228 81.624 107.445 8.797 1.00 34.80 C
ATOM 19 N4 C B 228 81.601 106.119 8.941 1.00 31.83 N
ATOM 20 C5 C B 228 80.612 108.094 8.027 1.00 33.43 C
ATOM 21 C6 C B 228 80.691 109.426 7.894 1.00 34.54 C
ATOM 22 P A B 229 85.191 113.147 5.238 1.00 36.57 P
ATOM 23 OP1 A B 229 85.923 114.439 5.150 1.00 36.78 O
ATOM 24 OP2 A B 229 84.883 112.386 3.997 1.00 37.82 O
ATOM 25 O5' A B 229 85.977 112.176 6.223 1.00 35.57 O
TER
Atoms:
C4: (81.852,108.395,4.973)
N3: (82.358,107.185,5.386)
OP1: (76.978,102.895,-0.007)
OP2: (77.016,105.439,0.289)
C2: (81.700,105.984,5.428)
C1': (79.605,104.774,5.162)
C3': (77.779,103.340,4.854)
O5': (77.948,103.921,2.035)
O4': (80.012,103.855,4.176)
C5': (78.640,102.757,2.503)
P: (77.663,104.117,0.483)
C4': (78.945,102.883,3.975)
C2': (78.085,104.824,5.050)
O2': (77.508,105.381,6.215)
N1: (80.376,106.022,5.027)
O4: (82.511,109.417,5.173)
O2: (82.251,104.960,5.785)
C6: (79.817,107.191,4.558)
C5: (80.493,108.347,4.512)
O3': (77.850,102.659,6.106)
N3: (82.358,107.185,5.386)
OP1: (76.978,102.895,-0.007)
OP2: (77.016,105.439,0.289)
C2: (81.700,105.984,5.428)
C1': (79.605,104.774,5.162)
C3': (77.779,103.340,4.854)
O5': (77.948,103.921,2.035)
O4': (80.012,103.855,4.176)
C5': (78.640,102.757,2.503)
P: (77.663,104.117,0.483)
C4': (78.945,102.883,3.975)
C2': (78.085,104.824,5.050)
O2': (77.508,105.381,6.215)
N1: (80.376,106.022,5.027)
O4: (82.511,109.417,5.173)
O2: (82.251,104.960,5.785)
C6: (79.817,107.191,4.558)
C5: (80.493,108.347,4.512)
O3': (77.850,102.659,6.106)
C2: (82.683,109.470,9.250)
OP1: (78.734,113.202,2.562)
OP2: (78.744,110.899,3.678)
C4: (81.624,107.445,8.797)
O5': (79.565,112.908,4.908)
C3': (82.986,112.404,6.455)
C1': (81.770,111.614,8.330)
O4': (80.840,112.025,7.336)
C5': (80.938,112.500,4.954)
P: (78.580,112.370,3.778)
O2: (83.585,110.131,9.790)
C4': (81.526,112.797,6.314)
C2': (83.139,112.202,7.956)
O2': (83.319,113.429,8.639)
N1: (81.701,110.139,8.481)
N3: (82.615,108.124,9.384)
N4: (81.601,106.119,8.941)
C6: (80.691,109.426,7.894)
C5: (80.612,108.094,8.027)
O3': (83.806,113.466,5.983)
OP1: (78.734,113.202,2.562)
OP2: (78.744,110.899,3.678)
C4: (81.624,107.445,8.797)
O5': (79.565,112.908,4.908)
C3': (82.986,112.404,6.455)
C1': (81.770,111.614,8.330)
O4': (80.840,112.025,7.336)
C5': (80.938,112.500,4.954)
P: (78.580,112.370,3.778)
O2: (83.585,110.131,9.790)
C4': (81.526,112.797,6.314)
C2': (83.139,112.202,7.956)
O2': (83.319,113.429,8.639)
N1: (81.701,110.139,8.481)
N3: (82.615,108.124,9.384)
N4: (81.601,106.119,8.941)
C6: (80.691,109.426,7.894)
C5: (80.612,108.094,8.027)
O3': (83.806,113.466,5.983)
Image (generated by PyMOL):