Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A258:A228
Extra
PDB:
ATOM 1 O3' G A 257 79.487 104.142 0.422 1.00 62.99 O
ATOM 2 P U A 258 77.993 104.152 1.014 1.00 65.28 P
ATOM 3 OP1 U A 258 77.318 102.941 0.470 1.00 65.94 O
ATOM 4 OP2 U A 258 77.359 105.489 0.819 1.00 64.97 O
ATOM 5 O5' U A 258 78.244 103.938 2.573 1.00 65.55 O
ATOM 6 C5' U A 258 78.964 102.776 3.041 1.00 67.03 C
ATOM 7 C4' U A 258 79.316 102.918 4.507 1.00 68.61 C
ATOM 8 O4' U A 258 80.345 103.949 4.700 1.00 67.68 O
ATOM 9 C3' U A 258 78.146 103.330 5.399 1.00 70.01 C
ATOM 10 O3' U A 258 78.249 102.679 6.671 1.00 74.57 O
ATOM 11 C2' U A 258 78.394 104.826 5.559 1.00 68.37 C
ATOM 12 O2' U A 258 77.702 105.392 6.651 1.00 68.84 O
ATOM 13 C1' U A 258 79.915 104.822 5.727 1.00 66.54 C
ATOM 14 N1 U A 258 80.666 106.097 5.687 1.00 63.46 N
ATOM 15 C2 U A 258 82.004 106.095 6.105 1.00 61.33 C
ATOM 16 O2 U A 258 82.590 105.093 6.453 1.00 59.70 O
ATOM 17 N3 U A 258 82.622 107.323 6.094 1.00 61.15 N
ATOM 18 C4 U A 258 82.064 108.537 5.712 1.00 63.03 C
ATOM 19 O4 U A 258 82.744 109.568 5.755 1.00 63.21 O
ATOM 20 C5 U A 258 80.702 108.459 5.284 1.00 63.05 C
ATOM 21 C6 U A 258 80.067 107.276 5.279 1.00 63.59 C
ATOM 22 P C A 259 76.923 102.123 7.395 1.00 79.22 P
ATOM 23 OP1 C A 259 75.888 103.194 7.274 1.00 78.61 O
ATOM 24 OP2 C A 259 77.280 101.587 8.742 1.00 78.70 O
ATOM 25 O5' C A 259 76.458 100.891 6.495 1.00 81.16 O
TER
ATOM 1 O3' C B 227 77.410 112.895 5.046 1.00 61.71 O
ATOM 2 P C B 228 78.822 112.466 4.401 1.00 63.53 P
ATOM 3 OP1 C B 228 78.927 113.223 3.108 1.00 62.83 O
ATOM 4 OP2 C B 228 78.897 110.974 4.402 1.00 62.56 O
ATOM 5 O5' C B 228 79.892 113.025 5.449 1.00 62.06 O
ATOM 6 C5' C B 228 81.243 112.538 5.511 1.00 61.07 C
ATOM 7 C4' C B 228 81.827 112.889 6.857 1.00 61.01 C
ATOM 8 O4' C B 228 81.108 112.146 7.875 1.00 61.25 O
ATOM 9 C3' C B 228 83.298 112.566 7.085 1.00 61.77 C
ATOM 10 O3' C B 228 84.125 113.651 6.631 1.00 60.00 O
ATOM 11 C2' C B 228 83.363 112.403 8.604 1.00 62.38 C
ATOM 12 O2' C B 228 83.439 113.631 9.318 1.00 64.22 O
ATOM 13 C1' C B 228 81.999 111.769 8.911 1.00 61.64 C
ATOM 14 N1 C B 228 81.928 110.296 9.085 1.00 60.97 N
ATOM 15 C2 C B 228 82.920 109.627 9.841 1.00 61.52 C
ATOM 16 O2 C B 228 83.861 110.276 10.329 1.00 61.70 O
ATOM 17 N3 C B 228 82.821 108.285 10.015 1.00 60.69 N
ATOM 18 C4 C B 228 81.803 107.611 9.470 1.00 60.82 C
ATOM 19 N4 C B 228 81.753 106.294 9.667 1.00 60.07 N
ATOM 20 C5 C B 228 80.793 108.259 8.700 1.00 60.57 C
ATOM 21 C6 C B 228 80.895 109.587 8.532 1.00 60.71 C
ATOM 22 P A B 229 85.487 113.352 5.820 1.00 58.59 P
ATOM 23 OP1 A B 229 86.249 114.630 5.739 1.00 57.69 O
ATOM 24 OP2 A B 229 85.098 112.670 4.565 1.00 60.46 O
ATOM 25 O5' A B 229 86.291 112.323 6.743 1.00 55.53 O
TER
ATOM 2 P U A 258 77.993 104.152 1.014 1.00 65.28 P
ATOM 3 OP1 U A 258 77.318 102.941 0.470 1.00 65.94 O
ATOM 4 OP2 U A 258 77.359 105.489 0.819 1.00 64.97 O
ATOM 5 O5' U A 258 78.244 103.938 2.573 1.00 65.55 O
ATOM 6 C5' U A 258 78.964 102.776 3.041 1.00 67.03 C
ATOM 7 C4' U A 258 79.316 102.918 4.507 1.00 68.61 C
ATOM 8 O4' U A 258 80.345 103.949 4.700 1.00 67.68 O
ATOM 9 C3' U A 258 78.146 103.330 5.399 1.00 70.01 C
ATOM 10 O3' U A 258 78.249 102.679 6.671 1.00 74.57 O
ATOM 11 C2' U A 258 78.394 104.826 5.559 1.00 68.37 C
ATOM 12 O2' U A 258 77.702 105.392 6.651 1.00 68.84 O
ATOM 13 C1' U A 258 79.915 104.822 5.727 1.00 66.54 C
ATOM 14 N1 U A 258 80.666 106.097 5.687 1.00 63.46 N
ATOM 15 C2 U A 258 82.004 106.095 6.105 1.00 61.33 C
ATOM 16 O2 U A 258 82.590 105.093 6.453 1.00 59.70 O
ATOM 17 N3 U A 258 82.622 107.323 6.094 1.00 61.15 N
ATOM 18 C4 U A 258 82.064 108.537 5.712 1.00 63.03 C
ATOM 19 O4 U A 258 82.744 109.568 5.755 1.00 63.21 O
ATOM 20 C5 U A 258 80.702 108.459 5.284 1.00 63.05 C
ATOM 21 C6 U A 258 80.067 107.276 5.279 1.00 63.59 C
ATOM 22 P C A 259 76.923 102.123 7.395 1.00 79.22 P
ATOM 23 OP1 C A 259 75.888 103.194 7.274 1.00 78.61 O
ATOM 24 OP2 C A 259 77.280 101.587 8.742 1.00 78.70 O
ATOM 25 O5' C A 259 76.458 100.891 6.495 1.00 81.16 O
TER
ATOM 1 O3' C B 227 77.410 112.895 5.046 1.00 61.71 O
ATOM 2 P C B 228 78.822 112.466 4.401 1.00 63.53 P
ATOM 3 OP1 C B 228 78.927 113.223 3.108 1.00 62.83 O
ATOM 4 OP2 C B 228 78.897 110.974 4.402 1.00 62.56 O
ATOM 5 O5' C B 228 79.892 113.025 5.449 1.00 62.06 O
ATOM 6 C5' C B 228 81.243 112.538 5.511 1.00 61.07 C
ATOM 7 C4' C B 228 81.827 112.889 6.857 1.00 61.01 C
ATOM 8 O4' C B 228 81.108 112.146 7.875 1.00 61.25 O
ATOM 9 C3' C B 228 83.298 112.566 7.085 1.00 61.77 C
ATOM 10 O3' C B 228 84.125 113.651 6.631 1.00 60.00 O
ATOM 11 C2' C B 228 83.363 112.403 8.604 1.00 62.38 C
ATOM 12 O2' C B 228 83.439 113.631 9.318 1.00 64.22 O
ATOM 13 C1' C B 228 81.999 111.769 8.911 1.00 61.64 C
ATOM 14 N1 C B 228 81.928 110.296 9.085 1.00 60.97 N
ATOM 15 C2 C B 228 82.920 109.627 9.841 1.00 61.52 C
ATOM 16 O2 C B 228 83.861 110.276 10.329 1.00 61.70 O
ATOM 17 N3 C B 228 82.821 108.285 10.015 1.00 60.69 N
ATOM 18 C4 C B 228 81.803 107.611 9.470 1.00 60.82 C
ATOM 19 N4 C B 228 81.753 106.294 9.667 1.00 60.07 N
ATOM 20 C5 C B 228 80.793 108.259 8.700 1.00 60.57 C
ATOM 21 C6 C B 228 80.895 109.587 8.532 1.00 60.71 C
ATOM 22 P A B 229 85.487 113.352 5.820 1.00 58.59 P
ATOM 23 OP1 A B 229 86.249 114.630 5.739 1.00 57.69 O
ATOM 24 OP2 A B 229 85.098 112.670 4.565 1.00 60.46 O
ATOM 25 O5' A B 229 86.291 112.323 6.743 1.00 55.53 O
TER
Atoms:
C4: (82.064,108.537,5.712)
N3: (82.622,107.323,6.094)
OP1: (77.318,102.941,0.470)
OP2: (77.359,105.489,0.819)
C2: (82.004,106.095,6.105)
C1': (79.915,104.822,5.727)
C3': (78.146,103.330,5.399)
O5': (78.244,103.938,2.573)
O4': (80.345,103.949,4.700)
C5': (78.964,102.776,3.041)
P: (77.993,104.152,1.014)
C4': (79.316,102.918,4.507)
C2': (78.394,104.826,5.559)
O2': (77.702,105.392,6.651)
N1: (80.666,106.097,5.687)
O4: (82.744,109.568,5.755)
O2: (82.590,105.093,6.453)
C6: (80.067,107.276,5.279)
C5: (80.702,108.459,5.284)
O3': (78.249,102.679,6.671)
N3: (82.622,107.323,6.094)
OP1: (77.318,102.941,0.470)
OP2: (77.359,105.489,0.819)
C2: (82.004,106.095,6.105)
C1': (79.915,104.822,5.727)
C3': (78.146,103.330,5.399)
O5': (78.244,103.938,2.573)
O4': (80.345,103.949,4.700)
C5': (78.964,102.776,3.041)
P: (77.993,104.152,1.014)
C4': (79.316,102.918,4.507)
C2': (78.394,104.826,5.559)
O2': (77.702,105.392,6.651)
N1: (80.666,106.097,5.687)
O4: (82.744,109.568,5.755)
O2: (82.590,105.093,6.453)
C6: (80.067,107.276,5.279)
C5: (80.702,108.459,5.284)
O3': (78.249,102.679,6.671)
C2: (82.920,109.627,9.841)
OP1: (78.927,113.223,3.108)
OP2: (78.897,110.974,4.402)
C4: (81.803,107.611,9.470)
O5': (79.892,113.025,5.449)
C3': (83.298,112.566,7.085)
C1': (81.999,111.769,8.911)
O4': (81.108,112.146,7.875)
C5': (81.243,112.538,5.511)
P: (78.822,112.466,4.401)
O2: (83.861,110.276,10.329)
C4': (81.827,112.889,6.857)
C2': (83.363,112.403,8.604)
O2': (83.439,113.631,9.318)
N1: (81.928,110.296,9.085)
N3: (82.821,108.285,10.015)
N4: (81.753,106.294,9.667)
C6: (80.895,109.587,8.532)
C5: (80.793,108.259,8.700)
O3': (84.125,113.651,6.631)
OP1: (78.927,113.223,3.108)
OP2: (78.897,110.974,4.402)
C4: (81.803,107.611,9.470)
O5': (79.892,113.025,5.449)
C3': (83.298,112.566,7.085)
C1': (81.999,111.769,8.911)
O4': (81.108,112.146,7.875)
C5': (81.243,112.538,5.511)
P: (78.822,112.466,4.401)
O2: (83.861,110.276,10.329)
C4': (81.827,112.889,6.857)
C2': (83.363,112.403,8.604)
O2': (83.439,113.631,9.318)
N1: (81.928,110.296,9.085)
N3: (82.821,108.285,10.015)
N4: (81.753,106.294,9.667)
C6: (80.895,109.587,8.532)
C5: (80.793,108.259,8.700)
O3': (84.125,113.651,6.631)
Image (generated by PyMOL):