Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A1087:A1086
Extra
PDB:
ATOM 1 O3' C A1086 49.553 101.155 115.441 1.00 35.66 O
ATOM 2 P U A1087 48.346 100.930 116.459 1.00 35.49 P
ATOM 3 OP1 U A1087 48.974 100.888 117.773 1.00 35.88 O
ATOM 4 OP2 U A1087 47.556 99.761 115.989 1.00 36.48 O
ATOM 5 O5' U A1087 47.481 102.257 116.318 1.00 36.26 O
ATOM 6 C5' U A1087 48.030 103.548 116.627 1.00 38.78 C
ATOM 7 C4' U A1087 46.956 104.603 116.518 1.00 40.98 C
ATOM 8 O4' U A1087 46.628 104.826 115.118 1.00 42.09 O
ATOM 9 C3' U A1087 45.642 104.239 117.194 1.00 40.93 C
ATOM 10 O3' U A1087 45.011 105.428 117.628 1.00 40.60 O
ATOM 11 C2' U A1087 44.840 103.654 116.038 1.00 42.16 C
ATOM 12 O2' U A1087 43.450 103.690 116.255 1.00 42.26 O
ATOM 13 C1' U A1087 45.248 104.606 114.921 1.00 43.18 C
ATOM 14 N1 U A1087 45.022 104.138 113.546 1.00 45.45 N
ATOM 15 C2 U A1087 44.445 105.038 112.665 1.00 46.22 C
ATOM 16 O2 U A1087 44.181 106.182 112.971 1.00 47.55 O
ATOM 17 N3 U A1087 44.196 104.545 111.412 1.00 45.47 N
ATOM 18 C4 U A1087 44.468 103.281 110.953 1.00 45.58 C
ATOM 19 O4 U A1087 44.254 103.018 109.775 1.00 44.43 O
ATOM 20 C5 U A1087 45.085 102.412 111.906 1.00 46.12 C
ATOM 21 C6 U A1087 45.344 102.859 113.138 1.00 45.95 C
ATOM 22 P C A1088 44.982 105.784 119.181 1.00 42.03 P
ATOM 23 OP1 C A1088 44.362 107.132 119.337 1.00 41.76 O
ATOM 24 OP2 C A1088 46.349 105.541 119.695 1.00 41.99 O
ATOM 25 O5' C A1088 44.001 104.693 119.807 1.00 41.09 O
TER
ATOM 1 O3' C B1085 45.649 99.016 112.085 1.00 36.14 O
ATOM 2 P C B1086 47.109 99.049 111.399 1.00 36.94 P
ATOM 3 OP1 C B1086 47.008 99.819 110.144 1.00 37.73 O
ATOM 4 OP2 C B1086 47.692 97.685 111.381 1.00 35.32 O
ATOM 5 O5' C B1086 47.952 99.949 112.390 1.00 36.97 O
ATOM 6 C5' C B1086 49.277 99.577 112.783 1.00 36.21 C
ATOM 7 C4' C B1086 50.044 100.809 113.140 1.00 35.31 C
ATOM 8 O4' C B1086 50.167 101.668 111.982 1.00 33.57 O
ATOM 9 C3' C B1086 49.293 101.643 114.148 1.00 33.85 C
ATOM 10 O3' C B1086 49.553 101.155 115.441 1.00 35.66 O
ATOM 11 C2' C B1086 49.837 103.041 113.907 1.00 34.74 C
ATOM 12 O2' C B1086 51.050 103.316 114.588 1.00 33.70 O
ATOM 13 C1' C B1086 50.072 103.016 112.394 1.00 33.01 C
ATOM 14 N1 C B1086 49.025 103.669 111.605 1.00 33.58 N
ATOM 15 C2 C B1086 48.835 105.064 111.729 1.00 33.50 C
ATOM 16 O2 C B1086 49.481 105.693 112.581 1.00 32.26 O
ATOM 17 N3 C B1086 47.941 105.675 110.919 1.00 33.24 N
ATOM 18 C4 C B1086 47.245 104.951 110.036 1.00 33.46 C
ATOM 19 N4 C B1086 46.421 105.592 109.207 1.00 33.63 N
ATOM 20 C5 C B1086 47.377 103.535 109.945 1.00 33.13 C
ATOM 21 C6 C B1086 48.263 102.944 110.736 1.00 32.69 C
ATOM 22 P U B1087 48.346 100.930 116.459 1.00 35.49 P
ATOM 23 OP1 U B1087 48.974 100.888 117.773 1.00 35.88 O
ATOM 24 OP2 U B1087 47.556 99.761 115.989 1.00 36.48 O
ATOM 25 O5' U B1087 47.481 102.257 116.318 1.00 36.26 O
TER
ATOM 2 P U A1087 48.346 100.930 116.459 1.00 35.49 P
ATOM 3 OP1 U A1087 48.974 100.888 117.773 1.00 35.88 O
ATOM 4 OP2 U A1087 47.556 99.761 115.989 1.00 36.48 O
ATOM 5 O5' U A1087 47.481 102.257 116.318 1.00 36.26 O
ATOM 6 C5' U A1087 48.030 103.548 116.627 1.00 38.78 C
ATOM 7 C4' U A1087 46.956 104.603 116.518 1.00 40.98 C
ATOM 8 O4' U A1087 46.628 104.826 115.118 1.00 42.09 O
ATOM 9 C3' U A1087 45.642 104.239 117.194 1.00 40.93 C
ATOM 10 O3' U A1087 45.011 105.428 117.628 1.00 40.60 O
ATOM 11 C2' U A1087 44.840 103.654 116.038 1.00 42.16 C
ATOM 12 O2' U A1087 43.450 103.690 116.255 1.00 42.26 O
ATOM 13 C1' U A1087 45.248 104.606 114.921 1.00 43.18 C
ATOM 14 N1 U A1087 45.022 104.138 113.546 1.00 45.45 N
ATOM 15 C2 U A1087 44.445 105.038 112.665 1.00 46.22 C
ATOM 16 O2 U A1087 44.181 106.182 112.971 1.00 47.55 O
ATOM 17 N3 U A1087 44.196 104.545 111.412 1.00 45.47 N
ATOM 18 C4 U A1087 44.468 103.281 110.953 1.00 45.58 C
ATOM 19 O4 U A1087 44.254 103.018 109.775 1.00 44.43 O
ATOM 20 C5 U A1087 45.085 102.412 111.906 1.00 46.12 C
ATOM 21 C6 U A1087 45.344 102.859 113.138 1.00 45.95 C
ATOM 22 P C A1088 44.982 105.784 119.181 1.00 42.03 P
ATOM 23 OP1 C A1088 44.362 107.132 119.337 1.00 41.76 O
ATOM 24 OP2 C A1088 46.349 105.541 119.695 1.00 41.99 O
ATOM 25 O5' C A1088 44.001 104.693 119.807 1.00 41.09 O
TER
ATOM 1 O3' C B1085 45.649 99.016 112.085 1.00 36.14 O
ATOM 2 P C B1086 47.109 99.049 111.399 1.00 36.94 P
ATOM 3 OP1 C B1086 47.008 99.819 110.144 1.00 37.73 O
ATOM 4 OP2 C B1086 47.692 97.685 111.381 1.00 35.32 O
ATOM 5 O5' C B1086 47.952 99.949 112.390 1.00 36.97 O
ATOM 6 C5' C B1086 49.277 99.577 112.783 1.00 36.21 C
ATOM 7 C4' C B1086 50.044 100.809 113.140 1.00 35.31 C
ATOM 8 O4' C B1086 50.167 101.668 111.982 1.00 33.57 O
ATOM 9 C3' C B1086 49.293 101.643 114.148 1.00 33.85 C
ATOM 10 O3' C B1086 49.553 101.155 115.441 1.00 35.66 O
ATOM 11 C2' C B1086 49.837 103.041 113.907 1.00 34.74 C
ATOM 12 O2' C B1086 51.050 103.316 114.588 1.00 33.70 O
ATOM 13 C1' C B1086 50.072 103.016 112.394 1.00 33.01 C
ATOM 14 N1 C B1086 49.025 103.669 111.605 1.00 33.58 N
ATOM 15 C2 C B1086 48.835 105.064 111.729 1.00 33.50 C
ATOM 16 O2 C B1086 49.481 105.693 112.581 1.00 32.26 O
ATOM 17 N3 C B1086 47.941 105.675 110.919 1.00 33.24 N
ATOM 18 C4 C B1086 47.245 104.951 110.036 1.00 33.46 C
ATOM 19 N4 C B1086 46.421 105.592 109.207 1.00 33.63 N
ATOM 20 C5 C B1086 47.377 103.535 109.945 1.00 33.13 C
ATOM 21 C6 C B1086 48.263 102.944 110.736 1.00 32.69 C
ATOM 22 P U B1087 48.346 100.930 116.459 1.00 35.49 P
ATOM 23 OP1 U B1087 48.974 100.888 117.773 1.00 35.88 O
ATOM 24 OP2 U B1087 47.556 99.761 115.989 1.00 36.48 O
ATOM 25 O5' U B1087 47.481 102.257 116.318 1.00 36.26 O
TER
Atoms:
C4: (44.468,103.281,110.953)
N3: (44.196,104.545,111.412)
OP1: (48.974,100.888,117.773)
OP2: (47.556,99.761,115.989)
C2: (44.445,105.038,112.665)
C1': (45.248,104.606,114.921)
C3': (45.642,104.239,117.194)
O5': (47.481,102.257,116.318)
O4': (46.628,104.826,115.118)
C5': (48.030,103.548,116.627)
P: (48.346,100.930,116.459)
C4': (46.956,104.603,116.518)
C2': (44.840,103.654,116.038)
O2': (43.450,103.690,116.255)
N1: (45.022,104.138,113.546)
O4: (44.254,103.018,109.775)
O2: (44.181,106.182,112.971)
C6: (45.344,102.859,113.138)
C5: (45.085,102.412,111.906)
O3': (45.011,105.428,117.628)
N3: (44.196,104.545,111.412)
OP1: (48.974,100.888,117.773)
OP2: (47.556,99.761,115.989)
C2: (44.445,105.038,112.665)
C1': (45.248,104.606,114.921)
C3': (45.642,104.239,117.194)
O5': (47.481,102.257,116.318)
O4': (46.628,104.826,115.118)
C5': (48.030,103.548,116.627)
P: (48.346,100.930,116.459)
C4': (46.956,104.603,116.518)
C2': (44.840,103.654,116.038)
O2': (43.450,103.690,116.255)
N1: (45.022,104.138,113.546)
O4: (44.254,103.018,109.775)
O2: (44.181,106.182,112.971)
C6: (45.344,102.859,113.138)
C5: (45.085,102.412,111.906)
O3': (45.011,105.428,117.628)
C2: (48.835,105.064,111.729)
OP1: (47.008,99.819,110.144)
OP2: (47.692,97.685,111.381)
C4: (47.245,104.951,110.036)
O5': (47.952,99.949,112.390)
C3': (49.293,101.643,114.148)
C1': (50.072,103.016,112.394)
O4': (50.167,101.668,111.982)
C5': (49.277,99.577,112.783)
P: (47.109,99.049,111.399)
O2: (49.481,105.693,112.581)
C4': (50.044,100.809,113.140)
C2': (49.837,103.041,113.907)
O2': (51.050,103.316,114.588)
N1: (49.025,103.669,111.605)
N3: (47.941,105.675,110.919)
N4: (46.421,105.592,109.207)
C6: (48.263,102.944,110.736)
C5: (47.377,103.535,109.945)
O3': (49.553,101.155,115.441)
OP1: (47.008,99.819,110.144)
OP2: (47.692,97.685,111.381)
C4: (47.245,104.951,110.036)
O5': (47.952,99.949,112.390)
C3': (49.293,101.643,114.148)
C1': (50.072,103.016,112.394)
O4': (50.167,101.668,111.982)
C5': (49.277,99.577,112.783)
P: (47.109,99.049,111.399)
O2: (49.481,105.693,112.581)
C4': (50.044,100.809,113.140)
C2': (49.837,103.041,113.907)
O2': (51.050,103.316,114.588)
N1: (49.025,103.669,111.605)
N3: (47.941,105.675,110.919)
N4: (46.421,105.592,109.207)
C6: (48.263,102.944,110.736)
C5: (47.377,103.535,109.945)
O3': (49.553,101.155,115.441)
Image (generated by PyMOL):