Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1087:A1086
Extra
PDB:
ATOM 1 O3' C A1086 49.616 101.521 115.447 1.00 42.93 O
ATOM 2 P U A1087 48.414 101.201 116.442 1.00 43.32 P
ATOM 3 OP1 U A1087 49.039 101.128 117.758 1.00 43.74 O
ATOM 4 OP2 U A1087 47.638 100.035 115.926 1.00 44.01 O
ATOM 5 O5' U A1087 47.527 102.512 116.358 1.00 43.86 O
ATOM 6 C5' U A1087 48.097 103.806 116.609 1.00 45.65 C
ATOM 7 C4' U A1087 47.022 104.852 116.526 1.00 47.46 C
ATOM 8 O4' U A1087 46.705 105.103 115.130 1.00 48.42 O
ATOM 9 C3' U A1087 45.714 104.452 117.195 1.00 46.32 C
ATOM 10 O3' U A1087 45.099 105.618 117.689 1.00 45.63 O
ATOM 11 C2' U A1087 44.897 103.915 116.024 1.00 47.56 C
ATOM 12 O2' U A1087 43.519 104.083 116.241 1.00 48.37 O
ATOM 13 C1' U A1087 45.338 104.851 114.907 1.00 48.44 C
ATOM 14 N1 U A1087 45.156 104.371 113.528 1.00 49.98 N
ATOM 15 C2 U A1087 44.515 105.240 112.657 1.00 51.37 C
ATOM 16 O2 U A1087 44.126 106.335 112.994 1.00 53.94 O
ATOM 17 N3 U A1087 44.338 104.774 111.385 1.00 51.27 N
ATOM 18 C4 U A1087 44.709 103.545 110.901 1.00 51.90 C
ATOM 19 O4 U A1087 44.512 103.289 109.717 1.00 51.94 O
ATOM 20 C5 U A1087 45.370 102.689 111.851 1.00 51.70 C
ATOM 21 C6 U A1087 45.579 103.123 113.099 1.00 50.53 C
ATOM 22 P C A1088 45.165 105.947 119.251 1.00 48.82 P
ATOM 23 OP1 C A1088 44.547 107.277 119.463 1.00 48.50 O
ATOM 24 OP2 C A1088 46.546 105.688 119.732 1.00 48.01 O
ATOM 25 O5' C A1088 44.182 104.882 119.907 1.00 47.65 O
TER
ATOM 1 O3' C B1085 45.656 99.352 112.124 1.00 40.84 O
ATOM 2 P C B1086 47.095 99.431 111.402 1.00 41.36 P
ATOM 3 OP1 C B1086 46.969 100.208 110.143 1.00 42.61 O
ATOM 4 OP2 C B1086 47.660 98.069 111.358 1.00 40.05 O
ATOM 5 O5' C B1086 47.947 100.326 112.394 1.00 39.73 O
ATOM 6 C5' C B1086 49.244 99.915 112.825 1.00 40.73 C
ATOM 7 C4' C B1086 50.058 101.120 113.161 1.00 41.47 C
ATOM 8 O4' C B1086 50.206 101.955 111.992 1.00 40.53 O
ATOM 9 C3' C B1086 49.339 101.995 114.156 1.00 41.27 C
ATOM 10 O3' C B1086 49.616 101.521 115.447 1.00 42.93 O
ATOM 11 C2' C B1086 49.918 103.373 113.891 1.00 41.11 C
ATOM 12 O2' C B1086 51.145 103.590 114.557 1.00 42.01 O
ATOM 13 C1' C B1086 50.134 103.318 112.377 1.00 39.76 C
ATOM 14 N1 C B1086 49.100 103.983 111.568 1.00 39.52 N
ATOM 15 C2 C B1086 48.948 105.383 111.664 1.00 38.72 C
ATOM 16 O2 C B1086 49.581 106.005 112.526 1.00 38.82 O
ATOM 17 N3 C B1086 48.099 106.009 110.822 1.00 38.00 N
ATOM 18 C4 C B1086 47.401 105.298 109.934 1.00 38.17 C
ATOM 19 N4 C B1086 46.622 105.951 109.070 1.00 38.02 N
ATOM 20 C5 C B1086 47.481 103.876 109.875 1.00 38.07 C
ATOM 21 C6 C B1086 48.325 103.265 110.701 1.00 38.11 C
ATOM 22 P U B1087 48.414 101.201 116.442 1.00 43.32 P
ATOM 23 OP1 U B1087 49.039 101.128 117.758 1.00 43.74 O
ATOM 24 OP2 U B1087 47.638 100.035 115.926 1.00 44.01 O
ATOM 25 O5' U B1087 47.527 102.512 116.358 1.00 43.86 O
TER
ATOM 2 P U A1087 48.414 101.201 116.442 1.00 43.32 P
ATOM 3 OP1 U A1087 49.039 101.128 117.758 1.00 43.74 O
ATOM 4 OP2 U A1087 47.638 100.035 115.926 1.00 44.01 O
ATOM 5 O5' U A1087 47.527 102.512 116.358 1.00 43.86 O
ATOM 6 C5' U A1087 48.097 103.806 116.609 1.00 45.65 C
ATOM 7 C4' U A1087 47.022 104.852 116.526 1.00 47.46 C
ATOM 8 O4' U A1087 46.705 105.103 115.130 1.00 48.42 O
ATOM 9 C3' U A1087 45.714 104.452 117.195 1.00 46.32 C
ATOM 10 O3' U A1087 45.099 105.618 117.689 1.00 45.63 O
ATOM 11 C2' U A1087 44.897 103.915 116.024 1.00 47.56 C
ATOM 12 O2' U A1087 43.519 104.083 116.241 1.00 48.37 O
ATOM 13 C1' U A1087 45.338 104.851 114.907 1.00 48.44 C
ATOM 14 N1 U A1087 45.156 104.371 113.528 1.00 49.98 N
ATOM 15 C2 U A1087 44.515 105.240 112.657 1.00 51.37 C
ATOM 16 O2 U A1087 44.126 106.335 112.994 1.00 53.94 O
ATOM 17 N3 U A1087 44.338 104.774 111.385 1.00 51.27 N
ATOM 18 C4 U A1087 44.709 103.545 110.901 1.00 51.90 C
ATOM 19 O4 U A1087 44.512 103.289 109.717 1.00 51.94 O
ATOM 20 C5 U A1087 45.370 102.689 111.851 1.00 51.70 C
ATOM 21 C6 U A1087 45.579 103.123 113.099 1.00 50.53 C
ATOM 22 P C A1088 45.165 105.947 119.251 1.00 48.82 P
ATOM 23 OP1 C A1088 44.547 107.277 119.463 1.00 48.50 O
ATOM 24 OP2 C A1088 46.546 105.688 119.732 1.00 48.01 O
ATOM 25 O5' C A1088 44.182 104.882 119.907 1.00 47.65 O
TER
ATOM 1 O3' C B1085 45.656 99.352 112.124 1.00 40.84 O
ATOM 2 P C B1086 47.095 99.431 111.402 1.00 41.36 P
ATOM 3 OP1 C B1086 46.969 100.208 110.143 1.00 42.61 O
ATOM 4 OP2 C B1086 47.660 98.069 111.358 1.00 40.05 O
ATOM 5 O5' C B1086 47.947 100.326 112.394 1.00 39.73 O
ATOM 6 C5' C B1086 49.244 99.915 112.825 1.00 40.73 C
ATOM 7 C4' C B1086 50.058 101.120 113.161 1.00 41.47 C
ATOM 8 O4' C B1086 50.206 101.955 111.992 1.00 40.53 O
ATOM 9 C3' C B1086 49.339 101.995 114.156 1.00 41.27 C
ATOM 10 O3' C B1086 49.616 101.521 115.447 1.00 42.93 O
ATOM 11 C2' C B1086 49.918 103.373 113.891 1.00 41.11 C
ATOM 12 O2' C B1086 51.145 103.590 114.557 1.00 42.01 O
ATOM 13 C1' C B1086 50.134 103.318 112.377 1.00 39.76 C
ATOM 14 N1 C B1086 49.100 103.983 111.568 1.00 39.52 N
ATOM 15 C2 C B1086 48.948 105.383 111.664 1.00 38.72 C
ATOM 16 O2 C B1086 49.581 106.005 112.526 1.00 38.82 O
ATOM 17 N3 C B1086 48.099 106.009 110.822 1.00 38.00 N
ATOM 18 C4 C B1086 47.401 105.298 109.934 1.00 38.17 C
ATOM 19 N4 C B1086 46.622 105.951 109.070 1.00 38.02 N
ATOM 20 C5 C B1086 47.481 103.876 109.875 1.00 38.07 C
ATOM 21 C6 C B1086 48.325 103.265 110.701 1.00 38.11 C
ATOM 22 P U B1087 48.414 101.201 116.442 1.00 43.32 P
ATOM 23 OP1 U B1087 49.039 101.128 117.758 1.00 43.74 O
ATOM 24 OP2 U B1087 47.638 100.035 115.926 1.00 44.01 O
ATOM 25 O5' U B1087 47.527 102.512 116.358 1.00 43.86 O
TER
Atoms:
C4: (44.709,103.545,110.901)
N3: (44.338,104.774,111.385)
OP1: (49.039,101.128,117.758)
OP2: (47.638,100.035,115.926)
C2: (44.515,105.240,112.657)
C1': (45.338,104.851,114.907)
C3': (45.714,104.452,117.195)
O5': (47.527,102.512,116.358)
O4': (46.705,105.103,115.130)
C5': (48.097,103.806,116.609)
P: (48.414,101.201,116.442)
C4': (47.022,104.852,116.526)
C2': (44.897,103.915,116.024)
O2': (43.519,104.083,116.241)
N1: (45.156,104.371,113.528)
O4: (44.512,103.289,109.717)
O2: (44.126,106.335,112.994)
C6: (45.579,103.123,113.099)
C5: (45.370,102.689,111.851)
O3': (45.099,105.618,117.689)
N3: (44.338,104.774,111.385)
OP1: (49.039,101.128,117.758)
OP2: (47.638,100.035,115.926)
C2: (44.515,105.240,112.657)
C1': (45.338,104.851,114.907)
C3': (45.714,104.452,117.195)
O5': (47.527,102.512,116.358)
O4': (46.705,105.103,115.130)
C5': (48.097,103.806,116.609)
P: (48.414,101.201,116.442)
C4': (47.022,104.852,116.526)
C2': (44.897,103.915,116.024)
O2': (43.519,104.083,116.241)
N1: (45.156,104.371,113.528)
O4: (44.512,103.289,109.717)
O2: (44.126,106.335,112.994)
C6: (45.579,103.123,113.099)
C5: (45.370,102.689,111.851)
O3': (45.099,105.618,117.689)
C2: (48.948,105.383,111.664)
OP1: (46.969,100.208,110.143)
OP2: (47.660,98.069,111.358)
C4: (47.401,105.298,109.934)
O5': (47.947,100.326,112.394)
C3': (49.339,101.995,114.156)
C1': (50.134,103.318,112.377)
O4': (50.206,101.955,111.992)
C5': (49.244,99.915,112.825)
P: (47.095,99.431,111.402)
O2: (49.581,106.005,112.526)
C4': (50.058,101.120,113.161)
C2': (49.918,103.373,113.891)
O2': (51.145,103.590,114.557)
N1: (49.100,103.983,111.568)
N3: (48.099,106.009,110.822)
N4: (46.622,105.951,109.070)
C6: (48.325,103.265,110.701)
C5: (47.481,103.876,109.875)
O3': (49.616,101.521,115.447)
OP1: (46.969,100.208,110.143)
OP2: (47.660,98.069,111.358)
C4: (47.401,105.298,109.934)
O5': (47.947,100.326,112.394)
C3': (49.339,101.995,114.156)
C1': (50.134,103.318,112.377)
O4': (50.206,101.955,111.992)
C5': (49.244,99.915,112.825)
P: (47.095,99.431,111.402)
O2: (49.581,106.005,112.526)
C4': (50.058,101.120,113.161)
C2': (49.918,103.373,113.891)
O2': (51.145,103.590,114.557)
N1: (49.100,103.983,111.568)
N3: (48.099,106.009,110.822)
N4: (46.622,105.951,109.070)
C6: (48.325,103.265,110.701)
C5: (47.481,103.876,109.875)
O3': (49.616,101.521,115.447)
Image (generated by PyMOL):