ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A794:A743

Extra

PDB:
ATOM 1 O3' A A 793 173.940 105.135 -38.554 1.00 22.97 O
ATOM 2 P A A 794 173.422 104.955 -40.044 1.00 24.33 P
ATOM 3 OP1 A A 794 173.160 106.265 -40.724 1.00 21.79 O
ATOM 4 OP2 A A 794 174.388 103.987 -40.611 1.00 25.18 O
ATOM 5 O5' A A 794 171.970 104.350 -39.790 1.00 24.66 O
ATOM 6 C5' A A 794 171.589 103.062 -40.262 1.00 25.03 C
ATOM 7 C4' A A 794 170.515 103.188 -41.322 1.00 24.15 C
ATOM 8 O4' A A 794 170.489 101.944 -42.044 1.00 25.71 O
ATOM 9 C3' A A 794 169.068 103.438 -40.909 1.00 23.13 C
ATOM 10 O3' A A 794 168.774 104.832 -40.834 1.00 25.05 O
ATOM 11 C2' A A 794 168.301 102.841 -42.076 1.00 22.27 C
ATOM 12 O2' A A 794 168.289 103.731 -43.167 1.00 21.79 O
ATOM 13 C1' A A 794 169.183 101.662 -42.464 1.00 21.91 C
ATOM 14 N9 A A 794 168.817 100.383 -41.872 1.00 22.65 N
ATOM 15 C8 A A 794 168.960 99.949 -40.573 1.00 20.21 C
ATOM 16 N7 A A 794 168.553 98.717 -40.383 1.00 20.72 N
ATOM 17 C5 A A 794 168.106 98.318 -41.637 1.00 21.33 C
ATOM 18 C6 A A 794 167.560 97.120 -42.107 1.00 21.57 C
ATOM 19 N6 A A 794 167.353 96.044 -41.342 1.00 21.85 N
ATOM 20 N1 A A 794 167.230 97.053 -43.415 1.00 23.58 N
ATOM 21 C2 A A 794 167.438 98.129 -44.191 1.00 25.29 C
ATOM 22 N3 A A 794 167.945 99.312 -43.867 1.00 23.55 N
ATOM 23 C4 A A 794 168.263 99.338 -42.561 1.00 22.71 C
ATOM 24 P C A 795 167.494 105.357 -39.990 1.00 25.88 P
ATOM 25 OP1 C A 795 166.382 105.647 -40.949 1.00 24.09 O
ATOM 26 OP2 C A 795 167.276 104.402 -38.860 1.00 24.62 O
ATOM 27 O5' C A 795 168.033 106.738 -39.399 1.00 23.45 O
TER

ATOM 1 O3' C B 742 164.603 97.470 -54.551 1.00 22.69 O
ATOM 2 P G B 743 166.056 96.821 -54.332 1.00 23.84 P
ATOM 3 OP1 G B 743 166.938 97.461 -55.357 1.00 24.01 O
ATOM 4 OP2 G B 743 165.918 95.347 -54.259 1.00 20.83 O
ATOM 5 O5' G B 743 166.500 97.307 -52.883 1.00 22.73 O
ATOM 6 C5' G B 743 166.856 98.674 -52.643 1.00 23.77 C
ATOM 7 C4' G B 743 167.094 98.890 -51.174 1.00 24.06 C
ATOM 8 O4' G B 743 165.904 98.496 -50.442 1.00 24.90 O
ATOM 9 C3' G B 743 168.198 98.046 -50.571 1.00 24.36 C
ATOM 10 O3' G B 743 169.437 98.677 -50.753 1.00 25.32 O
ATOM 11 C2' G B 743 167.786 97.976 -49.104 1.00 23.33 C
ATOM 12 O2' G B 743 168.098 99.159 -48.396 1.00 24.38 O
ATOM 13 C1' G B 743 166.266 97.892 -49.219 1.00 21.86 C
ATOM 14 N9 G B 743 165.796 96.514 -49.252 1.00 20.85 N
ATOM 15 C8 G B 743 165.403 95.793 -50.358 1.00 19.64 C
ATOM 16 N7 G B 743 165.052 94.566 -50.069 1.00 18.43 N
ATOM 17 C5 G B 743 165.219 94.473 -48.694 1.00 17.52 C
ATOM 18 C6 G B 743 165.011 93.387 -47.822 1.00 17.11 C
ATOM 19 O6 G B 743 164.642 92.237 -48.091 1.00 19.42 O
ATOM 20 N1 G B 743 165.300 93.725 -46.510 1.00 17.34 N
ATOM 21 C2 G B 743 165.763 94.940 -46.087 1.00 19.31 C
ATOM 22 N2 G B 743 166.021 95.047 -44.772 1.00 19.19 N
ATOM 23 N3 G B 743 165.970 95.970 -46.891 1.00 19.40 N
ATOM 24 C4 G B 743 165.675 95.667 -48.173 1.00 19.97 C
ATOM 25 P A B 744 170.583 97.966 -51.632 1.00 25.31 P
ATOM 26 OP1 A B 744 170.306 98.273 -53.084 1.00 24.24 O
ATOM 27 OP2 A B 744 170.771 96.563 -51.182 1.00 25.26 O
ATOM 28 O5' A B 744 171.862 98.771 -51.207 1.00 24.21 O
TER

Atoms:
OP1: (173.160,106.265,-40.724)
OP2: (174.388,103.987,-40.611)
C3': (169.068,103.438,-40.909)
C1': (169.183,101.662,-42.464)
C5': (171.589,103.062,-40.262)
O4': (170.489,101.944,-42.044)
C8: (168.960,99.949,-40.573)
O2': (168.289,103.731,-43.167)
C6: (167.560,97.120,-42.107)
C5: (168.106,98.318,-41.637)
C4: (168.263,99.338,-42.561)
P: (173.422,104.955,-40.044)
C4': (170.515,103.188,-41.322)
C2': (168.301,102.841,-42.076)
C2: (167.438,98.129,-44.191)
N1: (167.230,97.053,-43.415)
N3: (167.945,99.312,-43.867)
N6: (167.353,96.044,-41.342)
N7: (168.553,98.717,-40.383)
N9: (168.817,100.383,-41.872)
O5': (171.970,104.350,-39.790)
O3': (168.774,104.832,-40.834)
OP1: (166.938,97.461,-55.357)
OP2: (165.918,95.347,-54.259)
C3': (168.198,98.046,-50.571)
C1': (166.266,97.892,-49.219)
C5': (166.856,98.674,-52.643)
O6: (164.642,92.237,-48.091)
O4': (165.904,98.496,-50.442)
C8: (165.403,95.793,-50.358)
C2: (165.763,94.940,-46.087)
C6: (165.011,93.387,-47.822)
C5: (165.219,94.473,-48.694)
C4: (165.675,95.667,-48.173)
P: (166.056,96.821,-54.332)
C4': (167.094,98.890,-51.174)
C2': (167.786,97.976,-49.104)
O2': (168.098,99.159,-48.396)
N1: (165.300,93.725,-46.510)
N2: (166.021,95.047,-44.772)
N3: (165.970,95.970,-46.891)
N7: (165.052,94.566,-50.069)
N9: (165.796,96.514,-49.252)
O5': (166.500,97.307,-52.883)
O3': (169.437,98.677,-50.753)
Image (generated by PyMOL):
PyMOL image
show in jmol