Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2688:A2746
Extra
PDB:
ATOM 1 O3' G A2687 32.080 182.645 123.103 1.00 63.64 O
ATOM 2 P U A2688 30.514 182.853 123.411 1.00 62.17 P
ATOM 3 OP1 U A2688 30.100 182.007 124.566 1.00 61.37 O
ATOM 4 OP2 U A2688 29.752 182.781 122.138 1.00 61.24 O
ATOM 5 O5' U A2688 30.466 184.358 123.920 1.00 64.82 O
ATOM 6 C5' U A2688 31.031 184.721 125.190 1.00 68.97 C
ATOM 7 C4' U A2688 31.301 186.204 125.245 1.00 72.69 C
ATOM 8 O4' U A2688 32.472 186.520 124.441 1.00 73.46 O
ATOM 9 C3' U A2688 30.169 187.092 124.735 1.00 75.33 C
ATOM 10 O3' U A2688 30.077 188.296 125.477 1.00 78.67 O
ATOM 11 C2' U A2688 30.623 187.440 123.325 1.00 75.76 C
ATOM 12 O2' U A2688 30.102 188.675 122.866 1.00 76.74 O
ATOM 13 C1' U A2688 32.137 187.523 123.507 1.00 74.73 C
ATOM 14 N1 U A2688 32.845 187.251 122.253 1.00 74.87 N
ATOM 15 C2 U A2688 33.479 188.310 121.644 1.00 75.72 C
ATOM 16 O2 U A2688 33.501 189.434 122.123 1.00 76.12 O
ATOM 17 N3 U A2688 34.089 188.009 120.452 1.00 76.34 N
ATOM 18 C4 U A2688 34.128 186.775 119.829 1.00 76.47 C
ATOM 19 O4 U A2688 34.672 186.669 118.730 1.00 76.50 O
ATOM 20 C5 U A2688 33.463 185.726 120.538 1.00 76.41 C
ATOM 21 C6 U A2688 32.862 185.993 121.697 1.00 75.53 C
ATOM 22 P C A2689 28.823 188.542 126.451 1.00 80.64 P
ATOM 23 OP1 C A2689 27.751 187.529 126.218 1.00 80.01 O
ATOM 24 OP2 C A2689 28.485 189.978 126.390 1.00 81.36 O
ATOM 25 O5' C A2689 29.456 188.258 127.875 1.00 80.79 O
TER
ATOM 1 O3' A B2745 33.690 182.595 116.460 1.00 64.68 O
ATOM 2 P C B2746 32.201 182.677 117.022 1.00 66.27 P
ATOM 3 OP1 C B2746 32.340 183.059 118.449 1.00 65.85 O
ATOM 4 OP2 C B2746 31.460 181.441 116.663 1.00 65.56 O
ATOM 5 O5' C B2746 31.588 183.906 116.214 1.00 69.41 O
ATOM 6 C5' C B2746 31.886 185.269 116.592 1.00 74.46 C
ATOM 7 C4' C B2746 31.828 186.173 115.385 1.00 78.51 C
ATOM 8 O4' C B2746 32.933 185.863 114.499 1.00 79.26 O
ATOM 9 C3' C B2746 30.581 186.033 114.524 1.00 80.86 C
ATOM 10 O3' C B2746 29.513 186.835 115.031 1.00 83.14 O
ATOM 11 C2' C B2746 31.079 186.515 113.167 1.00 81.33 C
ATOM 12 O2' C B2746 31.165 187.927 113.106 1.00 83.03 O
ATOM 13 C1' C B2746 32.501 185.947 113.153 1.00 80.73 C
ATOM 14 N1 C B2746 32.621 184.606 112.550 1.00 80.76 N
ATOM 15 C2 C B2746 32.744 184.493 111.154 1.00 81.66 C
ATOM 16 O2 C B2746 32.741 185.522 110.462 1.00 82.02 O
ATOM 17 N3 C B2746 32.865 183.262 110.598 1.00 82.18 N
ATOM 18 C4 C B2746 32.864 182.174 111.376 1.00 81.94 C
ATOM 19 N4 C B2746 32.976 180.980 110.787 1.00 81.52 N
ATOM 20 C5 C B2746 32.742 182.261 112.795 1.00 81.24 C
ATOM 21 C6 C B2746 32.621 183.483 113.333 1.00 80.55 C
ATOM 22 P A B2747 28.027 186.228 115.120 1.00 84.83 P
ATOM 23 OP1 A B2747 27.145 187.316 115.617 1.00 85.49 O
ATOM 24 OP2 A B2747 28.077 184.940 115.851 1.00 85.15 O
ATOM 25 O5' A B2747 27.639 185.923 113.607 1.00 86.94 O
TER
ATOM 2 P U A2688 30.514 182.853 123.411 1.00 62.17 P
ATOM 3 OP1 U A2688 30.100 182.007 124.566 1.00 61.37 O
ATOM 4 OP2 U A2688 29.752 182.781 122.138 1.00 61.24 O
ATOM 5 O5' U A2688 30.466 184.358 123.920 1.00 64.82 O
ATOM 6 C5' U A2688 31.031 184.721 125.190 1.00 68.97 C
ATOM 7 C4' U A2688 31.301 186.204 125.245 1.00 72.69 C
ATOM 8 O4' U A2688 32.472 186.520 124.441 1.00 73.46 O
ATOM 9 C3' U A2688 30.169 187.092 124.735 1.00 75.33 C
ATOM 10 O3' U A2688 30.077 188.296 125.477 1.00 78.67 O
ATOM 11 C2' U A2688 30.623 187.440 123.325 1.00 75.76 C
ATOM 12 O2' U A2688 30.102 188.675 122.866 1.00 76.74 O
ATOM 13 C1' U A2688 32.137 187.523 123.507 1.00 74.73 C
ATOM 14 N1 U A2688 32.845 187.251 122.253 1.00 74.87 N
ATOM 15 C2 U A2688 33.479 188.310 121.644 1.00 75.72 C
ATOM 16 O2 U A2688 33.501 189.434 122.123 1.00 76.12 O
ATOM 17 N3 U A2688 34.089 188.009 120.452 1.00 76.34 N
ATOM 18 C4 U A2688 34.128 186.775 119.829 1.00 76.47 C
ATOM 19 O4 U A2688 34.672 186.669 118.730 1.00 76.50 O
ATOM 20 C5 U A2688 33.463 185.726 120.538 1.00 76.41 C
ATOM 21 C6 U A2688 32.862 185.993 121.697 1.00 75.53 C
ATOM 22 P C A2689 28.823 188.542 126.451 1.00 80.64 P
ATOM 23 OP1 C A2689 27.751 187.529 126.218 1.00 80.01 O
ATOM 24 OP2 C A2689 28.485 189.978 126.390 1.00 81.36 O
ATOM 25 O5' C A2689 29.456 188.258 127.875 1.00 80.79 O
TER
ATOM 1 O3' A B2745 33.690 182.595 116.460 1.00 64.68 O
ATOM 2 P C B2746 32.201 182.677 117.022 1.00 66.27 P
ATOM 3 OP1 C B2746 32.340 183.059 118.449 1.00 65.85 O
ATOM 4 OP2 C B2746 31.460 181.441 116.663 1.00 65.56 O
ATOM 5 O5' C B2746 31.588 183.906 116.214 1.00 69.41 O
ATOM 6 C5' C B2746 31.886 185.269 116.592 1.00 74.46 C
ATOM 7 C4' C B2746 31.828 186.173 115.385 1.00 78.51 C
ATOM 8 O4' C B2746 32.933 185.863 114.499 1.00 79.26 O
ATOM 9 C3' C B2746 30.581 186.033 114.524 1.00 80.86 C
ATOM 10 O3' C B2746 29.513 186.835 115.031 1.00 83.14 O
ATOM 11 C2' C B2746 31.079 186.515 113.167 1.00 81.33 C
ATOM 12 O2' C B2746 31.165 187.927 113.106 1.00 83.03 O
ATOM 13 C1' C B2746 32.501 185.947 113.153 1.00 80.73 C
ATOM 14 N1 C B2746 32.621 184.606 112.550 1.00 80.76 N
ATOM 15 C2 C B2746 32.744 184.493 111.154 1.00 81.66 C
ATOM 16 O2 C B2746 32.741 185.522 110.462 1.00 82.02 O
ATOM 17 N3 C B2746 32.865 183.262 110.598 1.00 82.18 N
ATOM 18 C4 C B2746 32.864 182.174 111.376 1.00 81.94 C
ATOM 19 N4 C B2746 32.976 180.980 110.787 1.00 81.52 N
ATOM 20 C5 C B2746 32.742 182.261 112.795 1.00 81.24 C
ATOM 21 C6 C B2746 32.621 183.483 113.333 1.00 80.55 C
ATOM 22 P A B2747 28.027 186.228 115.120 1.00 84.83 P
ATOM 23 OP1 A B2747 27.145 187.316 115.617 1.00 85.49 O
ATOM 24 OP2 A B2747 28.077 184.940 115.851 1.00 85.15 O
ATOM 25 O5' A B2747 27.639 185.923 113.607 1.00 86.94 O
TER
Atoms:
C4: (34.128,186.775,119.829)
N3: (34.089,188.009,120.452)
OP1: (30.100,182.007,124.566)
OP2: (29.752,182.781,122.138)
C2: (33.479,188.310,121.644)
C1': (32.137,187.523,123.507)
C3': (30.169,187.092,124.735)
O5': (30.466,184.358,123.920)
O4': (32.472,186.520,124.441)
C5': (31.031,184.721,125.190)
P: (30.514,182.853,123.411)
C4': (31.301,186.204,125.245)
C2': (30.623,187.440,123.325)
O2': (30.102,188.675,122.866)
N1: (32.845,187.251,122.253)
O4: (34.672,186.669,118.730)
O2: (33.501,189.434,122.123)
C6: (32.862,185.993,121.697)
C5: (33.463,185.726,120.538)
O3': (30.077,188.296,125.477)
N3: (34.089,188.009,120.452)
OP1: (30.100,182.007,124.566)
OP2: (29.752,182.781,122.138)
C2: (33.479,188.310,121.644)
C1': (32.137,187.523,123.507)
C3': (30.169,187.092,124.735)
O5': (30.466,184.358,123.920)
O4': (32.472,186.520,124.441)
C5': (31.031,184.721,125.190)
P: (30.514,182.853,123.411)
C4': (31.301,186.204,125.245)
C2': (30.623,187.440,123.325)
O2': (30.102,188.675,122.866)
N1: (32.845,187.251,122.253)
O4: (34.672,186.669,118.730)
O2: (33.501,189.434,122.123)
C6: (32.862,185.993,121.697)
C5: (33.463,185.726,120.538)
O3': (30.077,188.296,125.477)
C2: (32.744,184.493,111.154)
OP1: (32.340,183.059,118.449)
OP2: (31.460,181.441,116.663)
C4: (32.864,182.174,111.376)
O5': (31.588,183.906,116.214)
C3': (30.581,186.033,114.524)
C1': (32.501,185.947,113.153)
O4': (32.933,185.863,114.499)
C5': (31.886,185.269,116.592)
P: (32.201,182.677,117.022)
O2: (32.741,185.522,110.462)
C4': (31.828,186.173,115.385)
C2': (31.079,186.515,113.167)
O2': (31.165,187.927,113.106)
N1: (32.621,184.606,112.550)
N3: (32.865,183.262,110.598)
N4: (32.976,180.980,110.787)
C6: (32.621,183.483,113.333)
C5: (32.742,182.261,112.795)
O3': (29.513,186.835,115.031)
OP1: (32.340,183.059,118.449)
OP2: (31.460,181.441,116.663)
C4: (32.864,182.174,111.376)
O5': (31.588,183.906,116.214)
C3': (30.581,186.033,114.524)
C1': (32.501,185.947,113.153)
O4': (32.933,185.863,114.499)
C5': (31.886,185.269,116.592)
P: (32.201,182.677,117.022)
O2: (32.741,185.522,110.462)
C4': (31.828,186.173,115.385)
C2': (31.079,186.515,113.167)
O2': (31.165,187.927,113.106)
N1: (32.621,184.606,112.550)
N3: (32.865,183.262,110.598)
N4: (32.976,180.980,110.787)
C6: (32.621,183.483,113.333)
C5: (32.742,182.261,112.795)
O3': (29.513,186.835,115.031)
Image (generated by PyMOL):