Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0397:0398
Extra
PDB:
ATOM 1 O3' A A 396 96.715 91.359 13.879 1.00 53.80 O
ATOM 2 P U A 397 97.353 91.970 12.530 1.00 56.43 P
ATOM 3 OP1 U A 397 97.981 90.834 11.818 1.00 56.71 O
ATOM 4 OP2 U A 397 98.168 93.167 12.861 1.00 57.91 O
ATOM 5 O5' U A 397 96.098 92.457 11.684 1.00 55.78 O
ATOM 6 C5' U A 397 94.943 91.620 11.543 1.00 58.71 C
ATOM 7 C4' U A 397 93.757 92.439 11.104 1.00 60.60 C
ATOM 8 O4' U A 397 93.480 93.455 12.113 1.00 62.28 O
ATOM 9 C3' U A 397 93.916 93.185 9.782 1.00 60.88 C
ATOM 10 O3' U A 397 92.664 93.242 9.127 1.00 61.17 O
ATOM 11 C2' U A 397 94.287 94.593 10.224 1.00 62.14 C
ATOM 12 O2' U A 397 93.902 95.574 9.280 1.00 62.53 O
ATOM 13 C1' U A 397 93.466 94.733 11.505 1.00 61.91 C
ATOM 14 N1 U A 397 94.016 95.719 12.449 1.00 61.93 N
ATOM 15 C2 U A 397 93.185 96.756 12.863 1.00 61.93 C
ATOM 16 O2 U A 397 92.014 96.853 12.522 1.00 60.08 O
ATOM 17 N3 U A 397 93.776 97.671 13.699 1.00 61.35 N
ATOM 18 C4 U A 397 95.077 97.654 14.162 1.00 62.01 C
ATOM 19 O4 U A 397 95.483 98.589 14.853 1.00 64.22 O
ATOM 20 C5 U A 397 95.859 96.540 13.716 1.00 61.22 C
ATOM 21 C6 U A 397 95.319 95.635 12.899 1.00 60.61 C
ATOM 22 P A A 398 92.537 92.750 7.609 1.00 60.67 P
ATOM 23 OP1 A A 398 93.608 91.747 7.338 1.00 60.95 O
ATOM 24 OP2 A A 398 92.416 93.949 6.742 1.00 60.94 O
ATOM 25 O5' A A 398 91.129 92.015 7.600 1.00 60.69 O
TER
ATOM 1 O3' U B 397 92.664 93.242 9.127 1.00 61.17 O
ATOM 2 P A B 398 92.537 92.750 7.609 1.00 60.67 P
ATOM 3 OP1 A B 398 93.608 91.747 7.338 1.00 60.95 O
ATOM 4 OP2 A B 398 92.416 93.949 6.742 1.00 60.94 O
ATOM 5 O5' A B 398 91.129 92.015 7.600 1.00 60.69 O
ATOM 6 C5' A B 398 90.929 90.809 8.347 1.00 61.04 C
ATOM 7 C4' A B 398 89.463 90.477 8.403 1.00 62.73 C
ATOM 8 O4' A B 398 88.798 91.397 9.315 1.00 61.88 O
ATOM 9 C3' A B 398 88.721 90.578 7.072 1.00 63.21 C
ATOM 10 O3' A B 398 87.734 89.555 6.980 1.00 66.22 O
ATOM 11 C2' A B 398 88.054 91.948 7.172 1.00 61.82 C
ATOM 12 O2' A B 398 86.885 92.076 6.390 1.00 60.64 O
ATOM 13 C1' A B 398 87.706 91.999 8.656 1.00 62.10 C
ATOM 14 N9 A B 398 87.519 93.355 9.176 1.00 63.30 N
ATOM 15 C8 A B 398 88.468 94.303 9.484 1.00 63.09 C
ATOM 16 N7 A B 398 87.963 95.437 9.907 1.00 62.98 N
ATOM 17 C5 A B 398 86.590 95.222 9.881 1.00 63.54 C
ATOM 18 C6 A B 398 85.493 96.045 10.204 1.00 64.81 C
ATOM 19 N6 A B 398 85.613 97.306 10.635 1.00 65.76 N
ATOM 20 N1 A B 398 84.252 95.521 10.067 1.00 64.74 N
ATOM 21 C2 A B 398 84.133 94.260 9.634 1.00 63.75 C
ATOM 22 N3 A B 398 85.084 93.391 9.297 1.00 63.15 N
ATOM 23 C4 A B 398 86.304 93.941 9.443 1.00 63.17 C
ATOM 24 P A B 399 87.888 88.393 5.877 1.00 67.36 P
ATOM 25 OP1 A B 399 88.359 88.996 4.599 1.00 67.76 O
ATOM 26 OP2 A B 399 86.632 87.600 5.888 1.00 66.78 O
ATOM 27 O5' A B 399 89.068 87.491 6.450 1.00 67.64 O
TER
ATOM 2 P U A 397 97.353 91.970 12.530 1.00 56.43 P
ATOM 3 OP1 U A 397 97.981 90.834 11.818 1.00 56.71 O
ATOM 4 OP2 U A 397 98.168 93.167 12.861 1.00 57.91 O
ATOM 5 O5' U A 397 96.098 92.457 11.684 1.00 55.78 O
ATOM 6 C5' U A 397 94.943 91.620 11.543 1.00 58.71 C
ATOM 7 C4' U A 397 93.757 92.439 11.104 1.00 60.60 C
ATOM 8 O4' U A 397 93.480 93.455 12.113 1.00 62.28 O
ATOM 9 C3' U A 397 93.916 93.185 9.782 1.00 60.88 C
ATOM 10 O3' U A 397 92.664 93.242 9.127 1.00 61.17 O
ATOM 11 C2' U A 397 94.287 94.593 10.224 1.00 62.14 C
ATOM 12 O2' U A 397 93.902 95.574 9.280 1.00 62.53 O
ATOM 13 C1' U A 397 93.466 94.733 11.505 1.00 61.91 C
ATOM 14 N1 U A 397 94.016 95.719 12.449 1.00 61.93 N
ATOM 15 C2 U A 397 93.185 96.756 12.863 1.00 61.93 C
ATOM 16 O2 U A 397 92.014 96.853 12.522 1.00 60.08 O
ATOM 17 N3 U A 397 93.776 97.671 13.699 1.00 61.35 N
ATOM 18 C4 U A 397 95.077 97.654 14.162 1.00 62.01 C
ATOM 19 O4 U A 397 95.483 98.589 14.853 1.00 64.22 O
ATOM 20 C5 U A 397 95.859 96.540 13.716 1.00 61.22 C
ATOM 21 C6 U A 397 95.319 95.635 12.899 1.00 60.61 C
ATOM 22 P A A 398 92.537 92.750 7.609 1.00 60.67 P
ATOM 23 OP1 A A 398 93.608 91.747 7.338 1.00 60.95 O
ATOM 24 OP2 A A 398 92.416 93.949 6.742 1.00 60.94 O
ATOM 25 O5' A A 398 91.129 92.015 7.600 1.00 60.69 O
TER
ATOM 1 O3' U B 397 92.664 93.242 9.127 1.00 61.17 O
ATOM 2 P A B 398 92.537 92.750 7.609 1.00 60.67 P
ATOM 3 OP1 A B 398 93.608 91.747 7.338 1.00 60.95 O
ATOM 4 OP2 A B 398 92.416 93.949 6.742 1.00 60.94 O
ATOM 5 O5' A B 398 91.129 92.015 7.600 1.00 60.69 O
ATOM 6 C5' A B 398 90.929 90.809 8.347 1.00 61.04 C
ATOM 7 C4' A B 398 89.463 90.477 8.403 1.00 62.73 C
ATOM 8 O4' A B 398 88.798 91.397 9.315 1.00 61.88 O
ATOM 9 C3' A B 398 88.721 90.578 7.072 1.00 63.21 C
ATOM 10 O3' A B 398 87.734 89.555 6.980 1.00 66.22 O
ATOM 11 C2' A B 398 88.054 91.948 7.172 1.00 61.82 C
ATOM 12 O2' A B 398 86.885 92.076 6.390 1.00 60.64 O
ATOM 13 C1' A B 398 87.706 91.999 8.656 1.00 62.10 C
ATOM 14 N9 A B 398 87.519 93.355 9.176 1.00 63.30 N
ATOM 15 C8 A B 398 88.468 94.303 9.484 1.00 63.09 C
ATOM 16 N7 A B 398 87.963 95.437 9.907 1.00 62.98 N
ATOM 17 C5 A B 398 86.590 95.222 9.881 1.00 63.54 C
ATOM 18 C6 A B 398 85.493 96.045 10.204 1.00 64.81 C
ATOM 19 N6 A B 398 85.613 97.306 10.635 1.00 65.76 N
ATOM 20 N1 A B 398 84.252 95.521 10.067 1.00 64.74 N
ATOM 21 C2 A B 398 84.133 94.260 9.634 1.00 63.75 C
ATOM 22 N3 A B 398 85.084 93.391 9.297 1.00 63.15 N
ATOM 23 C4 A B 398 86.304 93.941 9.443 1.00 63.17 C
ATOM 24 P A B 399 87.888 88.393 5.877 1.00 67.36 P
ATOM 25 OP1 A B 399 88.359 88.996 4.599 1.00 67.76 O
ATOM 26 OP2 A B 399 86.632 87.600 5.888 1.00 66.78 O
ATOM 27 O5' A B 399 89.068 87.491 6.450 1.00 67.64 O
TER
Atoms:
C4: (95.077,97.654,14.162)
N3: (93.776,97.671,13.699)
OP1: (97.981,90.834,11.818)
OP2: (98.168,93.167,12.861)
C2: (93.185,96.756,12.863)
C1': (93.466,94.733,11.505)
C3': (93.916,93.185,9.782)
O5': (96.098,92.457,11.684)
O4': (93.480,93.455,12.113)
C5': (94.943,91.620,11.543)
P: (97.353,91.970,12.530)
C4': (93.757,92.439,11.104)
C2': (94.287,94.593,10.224)
O2': (93.902,95.574,9.280)
N1: (94.016,95.719,12.449)
O4: (95.483,98.589,14.853)
O2: (92.014,96.853,12.522)
C6: (95.319,95.635,12.899)
C5: (95.859,96.540,13.716)
O3': (92.664,93.242,9.127)
N3: (93.776,97.671,13.699)
OP1: (97.981,90.834,11.818)
OP2: (98.168,93.167,12.861)
C2: (93.185,96.756,12.863)
C1': (93.466,94.733,11.505)
C3': (93.916,93.185,9.782)
O5': (96.098,92.457,11.684)
O4': (93.480,93.455,12.113)
C5': (94.943,91.620,11.543)
P: (97.353,91.970,12.530)
C4': (93.757,92.439,11.104)
C2': (94.287,94.593,10.224)
O2': (93.902,95.574,9.280)
N1: (94.016,95.719,12.449)
O4: (95.483,98.589,14.853)
O2: (92.014,96.853,12.522)
C6: (95.319,95.635,12.899)
C5: (95.859,96.540,13.716)
O3': (92.664,93.242,9.127)
OP1: (93.608,91.747,7.338)
OP2: (92.416,93.949,6.742)
C3': (88.721,90.578,7.072)
C1': (87.706,91.999,8.656)
C5': (90.929,90.809,8.347)
O4': (88.798,91.397,9.315)
C8: (88.468,94.303,9.484)
O2': (86.885,92.076,6.390)
C6: (85.493,96.045,10.204)
C5: (86.590,95.222,9.881)
C4: (86.304,93.941,9.443)
P: (92.537,92.750,7.609)
C4': (89.463,90.477,8.403)
C2': (88.054,91.948,7.172)
C2: (84.133,94.260,9.634)
N1: (84.252,95.521,10.067)
N3: (85.084,93.391,9.297)
N6: (85.613,97.306,10.635)
N7: (87.963,95.437,9.907)
N9: (87.519,93.355,9.176)
O5': (91.129,92.015,7.600)
O3': (87.734,89.555,6.980)
OP2: (92.416,93.949,6.742)
C3': (88.721,90.578,7.072)
C1': (87.706,91.999,8.656)
C5': (90.929,90.809,8.347)
O4': (88.798,91.397,9.315)
C8: (88.468,94.303,9.484)
O2': (86.885,92.076,6.390)
C6: (85.493,96.045,10.204)
C5: (86.590,95.222,9.881)
C4: (86.304,93.941,9.443)
P: (92.537,92.750,7.609)
C4': (89.463,90.477,8.403)
C2': (88.054,91.948,7.172)
C2: (84.133,94.260,9.634)
N1: (84.252,95.521,10.067)
N3: (85.084,93.391,9.297)
N6: (85.613,97.306,10.635)
N7: (87.963,95.437,9.907)
N9: (87.519,93.355,9.176)
O5': (91.129,92.015,7.600)
O3': (87.734,89.555,6.980)
Image (generated by PyMOL):