Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0476:0477
Extra
PDB:
ATOM 1 O3' G A 475 25.967 163.553 55.517 1.00 46.94 O
ATOM 2 P U A 476 26.649 164.911 56.033 1.00 47.28 P
ATOM 3 OP1 U A 476 27.078 165.708 54.856 1.00 45.06 O
ATOM 4 OP2 U A 476 27.654 164.551 57.068 1.00 48.61 O
ATOM 5 O5' U A 476 25.452 165.653 56.775 1.00 47.04 O
ATOM 6 C5' U A 476 24.256 166.024 56.069 1.00 49.87 C
ATOM 7 C4' U A 476 23.106 166.174 57.037 1.00 52.15 C
ATOM 8 O4' U A 476 22.800 164.885 57.609 1.00 53.32 O
ATOM 9 C3' U A 476 23.380 167.040 58.258 1.00 54.07 C
ATOM 10 O3' U A 476 23.176 168.413 57.944 1.00 57.80 O
ATOM 11 C2' U A 476 22.326 166.555 59.248 1.00 54.02 C
ATOM 12 O2' U A 476 21.072 167.173 59.060 1.00 55.43 O
ATOM 13 C1' U A 476 22.192 165.076 58.871 1.00 54.04 C
ATOM 14 N1 U A 476 22.720 164.087 59.829 1.00 54.54 N
ATOM 15 C2 U A 476 22.048 163.935 61.033 1.00 54.71 C
ATOM 16 O2 U A 476 21.088 164.615 61.350 1.00 56.09 O
ATOM 17 N3 U A 476 22.546 162.961 61.856 1.00 54.05 N
ATOM 18 C4 U A 476 23.630 162.150 61.618 1.00 54.23 C
ATOM 19 O4 U A 476 23.946 161.305 62.455 1.00 54.53 O
ATOM 20 C5 U A 476 24.288 162.385 60.371 1.00 54.46 C
ATOM 21 C6 U A 476 23.825 163.321 59.542 1.00 53.91 C
ATOM 22 P A A 477 24.237 169.519 58.422 1.00 59.85 P
ATOM 23 OP1 A A 477 25.485 169.361 57.634 1.00 60.69 O
ATOM 24 OP2 A A 477 24.296 169.492 59.905 1.00 59.62 O
ATOM 25 O5' A A 477 23.568 170.889 57.964 1.00 61.51 O
TER
ATOM 1 O3' U B 476 23.176 168.413 57.944 1.00 57.80 O
ATOM 2 P A B 477 24.237 169.519 58.422 1.00 59.85 P
ATOM 3 OP1 A B 477 25.485 169.361 57.634 1.00 60.69 O
ATOM 4 OP2 A B 477 24.296 169.492 59.905 1.00 59.62 O
ATOM 5 O5' A B 477 23.568 170.889 57.964 1.00 61.51 O
ATOM 6 C5' A B 477 23.560 171.296 56.575 1.00 59.34 C
ATOM 7 C4' A B 477 22.308 172.096 56.269 1.00 59.14 C
ATOM 8 O4' A B 477 21.149 171.223 56.244 1.00 59.85 O
ATOM 9 C3' A B 477 21.933 173.164 57.282 1.00 58.66 C
ATOM 10 O3' A B 477 22.678 174.350 57.082 1.00 59.01 O
ATOM 11 C2' A B 477 20.450 173.365 57.006 1.00 58.61 C
ATOM 12 O2' A B 477 20.210 174.167 55.869 1.00 60.17 O
ATOM 13 C1' A B 477 20.009 171.933 56.700 1.00 59.41 C
ATOM 14 N9 A B 477 19.459 171.238 57.862 1.00 60.23 N
ATOM 15 C8 A B 477 19.996 170.186 58.564 1.00 59.97 C
ATOM 16 N7 A B 477 19.254 169.786 59.567 1.00 59.90 N
ATOM 17 C5 A B 477 18.155 170.631 59.525 1.00 60.57 C
ATOM 18 C6 A B 477 17.006 170.729 60.328 1.00 60.85 C
ATOM 19 N6 A B 477 16.763 169.937 61.373 1.00 61.99 N
ATOM 20 N1 A B 477 16.102 171.682 60.018 1.00 60.80 N
ATOM 21 C2 A B 477 16.346 172.479 58.971 1.00 61.67 C
ATOM 22 N3 A B 477 17.388 172.488 58.142 1.00 61.73 N
ATOM 23 C4 A B 477 18.267 171.528 58.479 1.00 61.24 C
ATOM 24 P C B 478 23.086 175.253 58.342 1.00 59.76 P
ATOM 25 OP1 C B 478 23.631 176.519 57.786 1.00 60.03 O
ATOM 26 OP2 C B 478 23.926 174.433 59.247 1.00 59.53 O
ATOM 27 O5' C B 478 21.695 175.557 59.068 1.00 58.89 O
TER
ATOM 2 P U A 476 26.649 164.911 56.033 1.00 47.28 P
ATOM 3 OP1 U A 476 27.078 165.708 54.856 1.00 45.06 O
ATOM 4 OP2 U A 476 27.654 164.551 57.068 1.00 48.61 O
ATOM 5 O5' U A 476 25.452 165.653 56.775 1.00 47.04 O
ATOM 6 C5' U A 476 24.256 166.024 56.069 1.00 49.87 C
ATOM 7 C4' U A 476 23.106 166.174 57.037 1.00 52.15 C
ATOM 8 O4' U A 476 22.800 164.885 57.609 1.00 53.32 O
ATOM 9 C3' U A 476 23.380 167.040 58.258 1.00 54.07 C
ATOM 10 O3' U A 476 23.176 168.413 57.944 1.00 57.80 O
ATOM 11 C2' U A 476 22.326 166.555 59.248 1.00 54.02 C
ATOM 12 O2' U A 476 21.072 167.173 59.060 1.00 55.43 O
ATOM 13 C1' U A 476 22.192 165.076 58.871 1.00 54.04 C
ATOM 14 N1 U A 476 22.720 164.087 59.829 1.00 54.54 N
ATOM 15 C2 U A 476 22.048 163.935 61.033 1.00 54.71 C
ATOM 16 O2 U A 476 21.088 164.615 61.350 1.00 56.09 O
ATOM 17 N3 U A 476 22.546 162.961 61.856 1.00 54.05 N
ATOM 18 C4 U A 476 23.630 162.150 61.618 1.00 54.23 C
ATOM 19 O4 U A 476 23.946 161.305 62.455 1.00 54.53 O
ATOM 20 C5 U A 476 24.288 162.385 60.371 1.00 54.46 C
ATOM 21 C6 U A 476 23.825 163.321 59.542 1.00 53.91 C
ATOM 22 P A A 477 24.237 169.519 58.422 1.00 59.85 P
ATOM 23 OP1 A A 477 25.485 169.361 57.634 1.00 60.69 O
ATOM 24 OP2 A A 477 24.296 169.492 59.905 1.00 59.62 O
ATOM 25 O5' A A 477 23.568 170.889 57.964 1.00 61.51 O
TER
ATOM 1 O3' U B 476 23.176 168.413 57.944 1.00 57.80 O
ATOM 2 P A B 477 24.237 169.519 58.422 1.00 59.85 P
ATOM 3 OP1 A B 477 25.485 169.361 57.634 1.00 60.69 O
ATOM 4 OP2 A B 477 24.296 169.492 59.905 1.00 59.62 O
ATOM 5 O5' A B 477 23.568 170.889 57.964 1.00 61.51 O
ATOM 6 C5' A B 477 23.560 171.296 56.575 1.00 59.34 C
ATOM 7 C4' A B 477 22.308 172.096 56.269 1.00 59.14 C
ATOM 8 O4' A B 477 21.149 171.223 56.244 1.00 59.85 O
ATOM 9 C3' A B 477 21.933 173.164 57.282 1.00 58.66 C
ATOM 10 O3' A B 477 22.678 174.350 57.082 1.00 59.01 O
ATOM 11 C2' A B 477 20.450 173.365 57.006 1.00 58.61 C
ATOM 12 O2' A B 477 20.210 174.167 55.869 1.00 60.17 O
ATOM 13 C1' A B 477 20.009 171.933 56.700 1.00 59.41 C
ATOM 14 N9 A B 477 19.459 171.238 57.862 1.00 60.23 N
ATOM 15 C8 A B 477 19.996 170.186 58.564 1.00 59.97 C
ATOM 16 N7 A B 477 19.254 169.786 59.567 1.00 59.90 N
ATOM 17 C5 A B 477 18.155 170.631 59.525 1.00 60.57 C
ATOM 18 C6 A B 477 17.006 170.729 60.328 1.00 60.85 C
ATOM 19 N6 A B 477 16.763 169.937 61.373 1.00 61.99 N
ATOM 20 N1 A B 477 16.102 171.682 60.018 1.00 60.80 N
ATOM 21 C2 A B 477 16.346 172.479 58.971 1.00 61.67 C
ATOM 22 N3 A B 477 17.388 172.488 58.142 1.00 61.73 N
ATOM 23 C4 A B 477 18.267 171.528 58.479 1.00 61.24 C
ATOM 24 P C B 478 23.086 175.253 58.342 1.00 59.76 P
ATOM 25 OP1 C B 478 23.631 176.519 57.786 1.00 60.03 O
ATOM 26 OP2 C B 478 23.926 174.433 59.247 1.00 59.53 O
ATOM 27 O5' C B 478 21.695 175.557 59.068 1.00 58.89 O
TER
Atoms:
C4: (23.630,162.150,61.618)
N3: (22.546,162.961,61.856)
OP1: (27.078,165.708,54.856)
OP2: (27.654,164.551,57.068)
C2: (22.048,163.935,61.033)
C1': (22.192,165.076,58.871)
C3': (23.380,167.040,58.258)
O5': (25.452,165.653,56.775)
O4': (22.800,164.885,57.609)
C5': (24.256,166.024,56.069)
P: (26.649,164.911,56.033)
C4': (23.106,166.174,57.037)
C2': (22.326,166.555,59.248)
O2': (21.072,167.173,59.060)
N1: (22.720,164.087,59.829)
O4: (23.946,161.305,62.455)
O2: (21.088,164.615,61.350)
C6: (23.825,163.321,59.542)
C5: (24.288,162.385,60.371)
O3': (23.176,168.413,57.944)
N3: (22.546,162.961,61.856)
OP1: (27.078,165.708,54.856)
OP2: (27.654,164.551,57.068)
C2: (22.048,163.935,61.033)
C1': (22.192,165.076,58.871)
C3': (23.380,167.040,58.258)
O5': (25.452,165.653,56.775)
O4': (22.800,164.885,57.609)
C5': (24.256,166.024,56.069)
P: (26.649,164.911,56.033)
C4': (23.106,166.174,57.037)
C2': (22.326,166.555,59.248)
O2': (21.072,167.173,59.060)
N1: (22.720,164.087,59.829)
O4: (23.946,161.305,62.455)
O2: (21.088,164.615,61.350)
C6: (23.825,163.321,59.542)
C5: (24.288,162.385,60.371)
O3': (23.176,168.413,57.944)
OP1: (25.485,169.361,57.634)
OP2: (24.296,169.492,59.905)
C3': (21.933,173.164,57.282)
C1': (20.009,171.933,56.700)
C5': (23.560,171.296,56.575)
O4': (21.149,171.223,56.244)
C8: (19.996,170.186,58.564)
O2': (20.210,174.167,55.869)
C6: (17.006,170.729,60.328)
C5: (18.155,170.631,59.525)
C4: (18.267,171.528,58.479)
P: (24.237,169.519,58.422)
C4': (22.308,172.096,56.269)
C2': (20.450,173.365,57.006)
C2: (16.346,172.479,58.971)
N1: (16.102,171.682,60.018)
N3: (17.388,172.488,58.142)
N6: (16.763,169.937,61.373)
N7: (19.254,169.786,59.567)
N9: (19.459,171.238,57.862)
O5': (23.568,170.889,57.964)
O3': (22.678,174.350,57.082)
OP2: (24.296,169.492,59.905)
C3': (21.933,173.164,57.282)
C1': (20.009,171.933,56.700)
C5': (23.560,171.296,56.575)
O4': (21.149,171.223,56.244)
C8: (19.996,170.186,58.564)
O2': (20.210,174.167,55.869)
C6: (17.006,170.729,60.328)
C5: (18.155,170.631,59.525)
C4: (18.267,171.528,58.479)
P: (24.237,169.519,58.422)
C4': (22.308,172.096,56.269)
C2': (20.450,173.365,57.006)
C2: (16.346,172.479,58.971)
N1: (16.102,171.682,60.018)
N3: (17.388,172.488,58.142)
N6: (16.763,169.937,61.373)
N7: (19.254,169.786,59.567)
N9: (19.459,171.238,57.862)
O5': (23.568,170.889,57.964)
O3': (22.678,174.350,57.082)
Image (generated by PyMOL):