Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0397:0398
Extra
PDB:
ATOM 1 O3' A A 396 97.156 91.511 14.093 1.00 71.03 O
ATOM 2 P U A 397 97.747 92.142 12.734 1.00 74.14 P
ATOM 3 OP1 U A 397 98.418 91.029 12.017 1.00 74.57 O
ATOM 4 OP2 U A 397 98.507 93.378 13.040 1.00 75.43 O
ATOM 5 O5' U A 397 96.455 92.573 11.911 1.00 74.10 O
ATOM 6 C5' U A 397 95.320 91.704 11.832 1.00 75.80 C
ATOM 7 C4' U A 397 94.109 92.478 11.391 1.00 77.47 C
ATOM 8 O4' U A 397 93.831 93.516 12.373 1.00 78.58 O
ATOM 9 C3' U A 397 94.239 93.189 10.047 1.00 78.29 C
ATOM 10 O3' U A 397 92.969 93.209 9.412 1.00 78.42 O
ATOM 11 C2' U A 397 94.631 94.604 10.454 1.00 78.86 C
ATOM 12 O2' U A 397 94.271 95.583 9.500 1.00 78.90 O
ATOM 13 C1' U A 397 93.814 94.779 11.733 1.00 79.03 C
ATOM 14 N1 U A 397 94.350 95.790 12.659 1.00 79.29 N
ATOM 15 C2 U A 397 93.530 96.871 12.978 1.00 78.56 C
ATOM 16 O2 U A 397 92.404 97.011 12.524 1.00 77.22 O
ATOM 17 N3 U A 397 94.084 97.781 13.847 1.00 78.51 N
ATOM 18 C4 U A 397 95.343 97.727 14.418 1.00 79.45 C
ATOM 19 O4 U A 397 95.698 98.625 15.183 1.00 80.62 O
ATOM 20 C5 U A 397 96.127 96.585 14.040 1.00 78.98 C
ATOM 21 C6 U A 397 95.619 95.679 13.198 1.00 78.43 C
ATOM 22 P A A 398 92.827 92.714 7.892 1.00 77.69 P
ATOM 23 OP1 A A 398 93.874 91.701 7.596 1.00 77.37 O
ATOM 24 OP2 A A 398 92.699 93.914 7.027 1.00 77.15 O
ATOM 25 O5' A A 398 91.412 91.993 7.886 1.00 78.73 O
TER
ATOM 1 O3' U B 397 92.969 93.209 9.412 1.00 78.42 O
ATOM 2 P A B 398 92.827 92.714 7.892 1.00 77.69 P
ATOM 3 OP1 A B 398 93.874 91.701 7.596 1.00 77.37 O
ATOM 4 OP2 A B 398 92.699 93.914 7.027 1.00 77.15 O
ATOM 5 O5' A B 398 91.412 91.993 7.886 1.00 78.73 O
ATOM 6 C5' A B 398 91.188 90.800 8.648 1.00 78.64 C
ATOM 7 C4' A B 398 89.721 90.466 8.644 1.00 79.94 C
ATOM 8 O4' A B 398 89.019 91.370 9.545 1.00 80.82 O
ATOM 9 C3' A B 398 89.037 90.608 7.285 1.00 80.51 C
ATOM 10 O3' A B 398 88.033 89.610 7.137 1.00 82.03 O
ATOM 11 C2' A B 398 88.392 91.987 7.386 1.00 79.66 C
ATOM 12 O2' A B 398 87.262 92.167 6.561 1.00 79.62 O
ATOM 13 C1' A B 398 87.967 92.000 8.847 1.00 80.11 C
ATOM 14 N9 A B 398 87.774 93.344 9.379 1.00 80.61 N
ATOM 15 C8 A B 398 88.716 94.289 9.710 1.00 80.28 C
ATOM 16 N7 A B 398 88.203 95.409 10.158 1.00 80.66 N
ATOM 17 C5 A B 398 86.832 95.186 10.123 1.00 80.90 C
ATOM 18 C6 A B 398 85.733 95.988 10.476 1.00 81.74 C
ATOM 19 N6 A B 398 85.849 97.228 10.963 1.00 81.73 N
ATOM 20 N1 A B 398 84.493 95.464 10.314 1.00 82.05 N
ATOM 21 C2 A B 398 84.382 94.217 9.835 1.00 81.20 C
ATOM 22 N3 A B 398 85.339 93.365 9.474 1.00 80.43 N
ATOM 23 C4 A B 398 86.555 93.918 9.644 1.00 80.73 C
ATOM 24 P A B 399 88.266 88.397 6.109 1.00 82.47 P
ATOM 25 OP1 A B 399 88.794 88.955 4.830 1.00 82.22 O
ATOM 26 OP2 A B 399 87.024 87.576 6.093 1.00 82.36 O
ATOM 27 O5' A B 399 89.435 87.564 6.797 1.00 82.06 O
TER
ATOM 2 P U A 397 97.747 92.142 12.734 1.00 74.14 P
ATOM 3 OP1 U A 397 98.418 91.029 12.017 1.00 74.57 O
ATOM 4 OP2 U A 397 98.507 93.378 13.040 1.00 75.43 O
ATOM 5 O5' U A 397 96.455 92.573 11.911 1.00 74.10 O
ATOM 6 C5' U A 397 95.320 91.704 11.832 1.00 75.80 C
ATOM 7 C4' U A 397 94.109 92.478 11.391 1.00 77.47 C
ATOM 8 O4' U A 397 93.831 93.516 12.373 1.00 78.58 O
ATOM 9 C3' U A 397 94.239 93.189 10.047 1.00 78.29 C
ATOM 10 O3' U A 397 92.969 93.209 9.412 1.00 78.42 O
ATOM 11 C2' U A 397 94.631 94.604 10.454 1.00 78.86 C
ATOM 12 O2' U A 397 94.271 95.583 9.500 1.00 78.90 O
ATOM 13 C1' U A 397 93.814 94.779 11.733 1.00 79.03 C
ATOM 14 N1 U A 397 94.350 95.790 12.659 1.00 79.29 N
ATOM 15 C2 U A 397 93.530 96.871 12.978 1.00 78.56 C
ATOM 16 O2 U A 397 92.404 97.011 12.524 1.00 77.22 O
ATOM 17 N3 U A 397 94.084 97.781 13.847 1.00 78.51 N
ATOM 18 C4 U A 397 95.343 97.727 14.418 1.00 79.45 C
ATOM 19 O4 U A 397 95.698 98.625 15.183 1.00 80.62 O
ATOM 20 C5 U A 397 96.127 96.585 14.040 1.00 78.98 C
ATOM 21 C6 U A 397 95.619 95.679 13.198 1.00 78.43 C
ATOM 22 P A A 398 92.827 92.714 7.892 1.00 77.69 P
ATOM 23 OP1 A A 398 93.874 91.701 7.596 1.00 77.37 O
ATOM 24 OP2 A A 398 92.699 93.914 7.027 1.00 77.15 O
ATOM 25 O5' A A 398 91.412 91.993 7.886 1.00 78.73 O
TER
ATOM 1 O3' U B 397 92.969 93.209 9.412 1.00 78.42 O
ATOM 2 P A B 398 92.827 92.714 7.892 1.00 77.69 P
ATOM 3 OP1 A B 398 93.874 91.701 7.596 1.00 77.37 O
ATOM 4 OP2 A B 398 92.699 93.914 7.027 1.00 77.15 O
ATOM 5 O5' A B 398 91.412 91.993 7.886 1.00 78.73 O
ATOM 6 C5' A B 398 91.188 90.800 8.648 1.00 78.64 C
ATOM 7 C4' A B 398 89.721 90.466 8.644 1.00 79.94 C
ATOM 8 O4' A B 398 89.019 91.370 9.545 1.00 80.82 O
ATOM 9 C3' A B 398 89.037 90.608 7.285 1.00 80.51 C
ATOM 10 O3' A B 398 88.033 89.610 7.137 1.00 82.03 O
ATOM 11 C2' A B 398 88.392 91.987 7.386 1.00 79.66 C
ATOM 12 O2' A B 398 87.262 92.167 6.561 1.00 79.62 O
ATOM 13 C1' A B 398 87.967 92.000 8.847 1.00 80.11 C
ATOM 14 N9 A B 398 87.774 93.344 9.379 1.00 80.61 N
ATOM 15 C8 A B 398 88.716 94.289 9.710 1.00 80.28 C
ATOM 16 N7 A B 398 88.203 95.409 10.158 1.00 80.66 N
ATOM 17 C5 A B 398 86.832 95.186 10.123 1.00 80.90 C
ATOM 18 C6 A B 398 85.733 95.988 10.476 1.00 81.74 C
ATOM 19 N6 A B 398 85.849 97.228 10.963 1.00 81.73 N
ATOM 20 N1 A B 398 84.493 95.464 10.314 1.00 82.05 N
ATOM 21 C2 A B 398 84.382 94.217 9.835 1.00 81.20 C
ATOM 22 N3 A B 398 85.339 93.365 9.474 1.00 80.43 N
ATOM 23 C4 A B 398 86.555 93.918 9.644 1.00 80.73 C
ATOM 24 P A B 399 88.266 88.397 6.109 1.00 82.47 P
ATOM 25 OP1 A B 399 88.794 88.955 4.830 1.00 82.22 O
ATOM 26 OP2 A B 399 87.024 87.576 6.093 1.00 82.36 O
ATOM 27 O5' A B 399 89.435 87.564 6.797 1.00 82.06 O
TER
Atoms:
C4: (95.343,97.727,14.418)
N3: (94.084,97.781,13.847)
OP1: (98.418,91.029,12.017)
OP2: (98.507,93.378,13.040)
C2: (93.530,96.871,12.978)
C1': (93.814,94.779,11.733)
C3': (94.239,93.189,10.047)
O5': (96.455,92.573,11.911)
O4': (93.831,93.516,12.373)
C5': (95.320,91.704,11.832)
P: (97.747,92.142,12.734)
C4': (94.109,92.478,11.391)
C2': (94.631,94.604,10.454)
O2': (94.271,95.583,9.500)
N1: (94.350,95.790,12.659)
O4: (95.698,98.625,15.183)
O2: (92.404,97.011,12.524)
C6: (95.619,95.679,13.198)
C5: (96.127,96.585,14.040)
O3': (92.969,93.209,9.412)
N3: (94.084,97.781,13.847)
OP1: (98.418,91.029,12.017)
OP2: (98.507,93.378,13.040)
C2: (93.530,96.871,12.978)
C1': (93.814,94.779,11.733)
C3': (94.239,93.189,10.047)
O5': (96.455,92.573,11.911)
O4': (93.831,93.516,12.373)
C5': (95.320,91.704,11.832)
P: (97.747,92.142,12.734)
C4': (94.109,92.478,11.391)
C2': (94.631,94.604,10.454)
O2': (94.271,95.583,9.500)
N1: (94.350,95.790,12.659)
O4: (95.698,98.625,15.183)
O2: (92.404,97.011,12.524)
C6: (95.619,95.679,13.198)
C5: (96.127,96.585,14.040)
O3': (92.969,93.209,9.412)
OP1: (93.874,91.701,7.596)
OP2: (92.699,93.914,7.027)
C3': (89.037,90.608,7.285)
C1': (87.967,92.000,8.847)
C5': (91.188,90.800,8.648)
O4': (89.019,91.370,9.545)
C8: (88.716,94.289,9.710)
O2': (87.262,92.167,6.561)
C6: (85.733,95.988,10.476)
C5: (86.832,95.186,10.123)
C4: (86.555,93.918,9.644)
P: (92.827,92.714,7.892)
C4': (89.721,90.466,8.644)
C2': (88.392,91.987,7.386)
C2: (84.382,94.217,9.835)
N1: (84.493,95.464,10.314)
N3: (85.339,93.365,9.474)
N6: (85.849,97.228,10.963)
N7: (88.203,95.409,10.158)
N9: (87.774,93.344,9.379)
O5': (91.412,91.993,7.886)
O3': (88.033,89.610,7.137)
OP2: (92.699,93.914,7.027)
C3': (89.037,90.608,7.285)
C1': (87.967,92.000,8.847)
C5': (91.188,90.800,8.648)
O4': (89.019,91.370,9.545)
C8: (88.716,94.289,9.710)
O2': (87.262,92.167,6.561)
C6: (85.733,95.988,10.476)
C5: (86.832,95.186,10.123)
C4: (86.555,93.918,9.644)
P: (92.827,92.714,7.892)
C4': (89.721,90.466,8.644)
C2': (88.392,91.987,7.386)
C2: (84.382,94.217,9.835)
N1: (84.493,95.464,10.314)
N3: (85.339,93.365,9.474)
N6: (85.849,97.228,10.963)
N7: (88.203,95.409,10.158)
N9: (87.774,93.344,9.379)
O5': (91.412,91.993,7.886)
O3': (88.033,89.610,7.137)
Image (generated by PyMOL):