Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0397:0398
Extra
PDB:
ATOM 1 O3' A A 396 96.838 91.337 13.826 1.00 60.28 O
ATOM 2 P U A 397 97.456 92.018 12.511 1.00 63.24 P
ATOM 3 OP1 U A 397 98.171 90.939 11.787 1.00 64.41 O
ATOM 4 OP2 U A 397 98.182 93.257 12.888 1.00 63.66 O
ATOM 5 O5' U A 397 96.180 92.440 11.666 1.00 63.74 O
ATOM 6 C5' U A 397 95.021 91.603 11.638 1.00 66.85 C
ATOM 7 C4' U A 397 93.822 92.404 11.219 1.00 69.74 C
ATOM 8 O4' U A 397 93.568 93.436 12.214 1.00 71.57 O
ATOM 9 C3' U A 397 93.960 93.122 9.882 1.00 70.32 C
ATOM 10 O3' U A 397 92.705 93.145 9.240 1.00 70.19 O
ATOM 11 C2' U A 397 94.351 94.536 10.290 1.00 71.48 C
ATOM 12 O2' U A 397 93.960 95.514 9.346 1.00 72.63 O
ATOM 13 C1' U A 397 93.567 94.707 11.590 1.00 72.20 C
ATOM 14 N1 U A 397 94.179 95.682 12.507 1.00 73.09 N
ATOM 15 C2 U A 397 93.384 96.712 12.982 1.00 72.73 C
ATOM 16 O2 U A 397 92.208 96.832 12.693 1.00 72.13 O
ATOM 17 N3 U A 397 94.022 97.599 13.811 1.00 73.42 N
ATOM 18 C4 U A 397 95.345 97.562 14.209 1.00 74.98 C
ATOM 19 O4 U A 397 95.782 98.446 14.951 1.00 76.57 O
ATOM 20 C5 U A 397 96.096 96.463 13.685 1.00 74.52 C
ATOM 21 C6 U A 397 95.505 95.583 12.877 1.00 73.31 C
ATOM 22 P A A 398 92.590 92.689 7.712 1.00 70.43 P
ATOM 23 OP1 A A 398 93.655 91.692 7.413 1.00 69.13 O
ATOM 24 OP2 A A 398 92.474 93.914 6.877 1.00 71.42 O
ATOM 25 O5' A A 398 91.177 91.967 7.673 1.00 71.31 O
TER
ATOM 1 O3' U B 397 92.705 93.145 9.240 1.00 70.19 O
ATOM 2 P A B 398 92.590 92.689 7.712 1.00 70.43 P
ATOM 3 OP1 A B 398 93.655 91.692 7.413 1.00 69.13 O
ATOM 4 OP2 A B 398 92.474 93.914 6.877 1.00 71.42 O
ATOM 5 O5' A B 398 91.177 91.967 7.673 1.00 71.31 O
ATOM 6 C5' A B 398 90.947 90.752 8.402 1.00 70.99 C
ATOM 7 C4' A B 398 89.478 90.420 8.390 1.00 71.16 C
ATOM 8 O4' A B 398 88.771 91.320 9.290 1.00 71.73 O
ATOM 9 C3' A B 398 88.798 90.563 7.031 1.00 71.37 C
ATOM 10 O3' A B 398 87.812 89.556 6.876 1.00 73.32 O
ATOM 11 C2' A B 398 88.140 91.936 7.132 1.00 70.19 C
ATOM 12 O2' A B 398 87.015 92.102 6.301 1.00 69.63 O
ATOM 13 C1' A B 398 87.716 91.951 8.594 1.00 70.42 C
ATOM 14 N9 A B 398 87.531 93.299 9.125 1.00 70.29 N
ATOM 15 C8 A B 398 88.487 94.244 9.421 1.00 69.76 C
ATOM 16 N7 A B 398 87.992 95.377 9.857 1.00 69.44 N
ATOM 17 C5 A B 398 86.619 95.163 9.856 1.00 70.43 C
ATOM 18 C6 A B 398 85.532 95.987 10.207 1.00 70.69 C
ATOM 19 N6 A B 398 85.672 97.243 10.646 1.00 70.67 N
ATOM 20 N1 A B 398 84.284 95.470 10.091 1.00 70.12 N
ATOM 21 C2 A B 398 84.151 94.212 9.651 1.00 69.42 C
ATOM 22 N3 A B 398 85.095 93.340 9.290 1.00 70.17 N
ATOM 23 C4 A B 398 86.321 93.885 9.416 1.00 70.39 C
ATOM 24 P A B 399 88.061 88.363 5.833 1.00 74.07 P
ATOM 25 OP1 A B 399 88.633 88.950 4.593 1.00 75.03 O
ATOM 26 OP2 A B 399 86.816 87.554 5.756 1.00 73.82 O
ATOM 27 O5' A B 399 89.211 87.506 6.522 1.00 73.83 O
TER
ATOM 2 P U A 397 97.456 92.018 12.511 1.00 63.24 P
ATOM 3 OP1 U A 397 98.171 90.939 11.787 1.00 64.41 O
ATOM 4 OP2 U A 397 98.182 93.257 12.888 1.00 63.66 O
ATOM 5 O5' U A 397 96.180 92.440 11.666 1.00 63.74 O
ATOM 6 C5' U A 397 95.021 91.603 11.638 1.00 66.85 C
ATOM 7 C4' U A 397 93.822 92.404 11.219 1.00 69.74 C
ATOM 8 O4' U A 397 93.568 93.436 12.214 1.00 71.57 O
ATOM 9 C3' U A 397 93.960 93.122 9.882 1.00 70.32 C
ATOM 10 O3' U A 397 92.705 93.145 9.240 1.00 70.19 O
ATOM 11 C2' U A 397 94.351 94.536 10.290 1.00 71.48 C
ATOM 12 O2' U A 397 93.960 95.514 9.346 1.00 72.63 O
ATOM 13 C1' U A 397 93.567 94.707 11.590 1.00 72.20 C
ATOM 14 N1 U A 397 94.179 95.682 12.507 1.00 73.09 N
ATOM 15 C2 U A 397 93.384 96.712 12.982 1.00 72.73 C
ATOM 16 O2 U A 397 92.208 96.832 12.693 1.00 72.13 O
ATOM 17 N3 U A 397 94.022 97.599 13.811 1.00 73.42 N
ATOM 18 C4 U A 397 95.345 97.562 14.209 1.00 74.98 C
ATOM 19 O4 U A 397 95.782 98.446 14.951 1.00 76.57 O
ATOM 20 C5 U A 397 96.096 96.463 13.685 1.00 74.52 C
ATOM 21 C6 U A 397 95.505 95.583 12.877 1.00 73.31 C
ATOM 22 P A A 398 92.590 92.689 7.712 1.00 70.43 P
ATOM 23 OP1 A A 398 93.655 91.692 7.413 1.00 69.13 O
ATOM 24 OP2 A A 398 92.474 93.914 6.877 1.00 71.42 O
ATOM 25 O5' A A 398 91.177 91.967 7.673 1.00 71.31 O
TER
ATOM 1 O3' U B 397 92.705 93.145 9.240 1.00 70.19 O
ATOM 2 P A B 398 92.590 92.689 7.712 1.00 70.43 P
ATOM 3 OP1 A B 398 93.655 91.692 7.413 1.00 69.13 O
ATOM 4 OP2 A B 398 92.474 93.914 6.877 1.00 71.42 O
ATOM 5 O5' A B 398 91.177 91.967 7.673 1.00 71.31 O
ATOM 6 C5' A B 398 90.947 90.752 8.402 1.00 70.99 C
ATOM 7 C4' A B 398 89.478 90.420 8.390 1.00 71.16 C
ATOM 8 O4' A B 398 88.771 91.320 9.290 1.00 71.73 O
ATOM 9 C3' A B 398 88.798 90.563 7.031 1.00 71.37 C
ATOM 10 O3' A B 398 87.812 89.556 6.876 1.00 73.32 O
ATOM 11 C2' A B 398 88.140 91.936 7.132 1.00 70.19 C
ATOM 12 O2' A B 398 87.015 92.102 6.301 1.00 69.63 O
ATOM 13 C1' A B 398 87.716 91.951 8.594 1.00 70.42 C
ATOM 14 N9 A B 398 87.531 93.299 9.125 1.00 70.29 N
ATOM 15 C8 A B 398 88.487 94.244 9.421 1.00 69.76 C
ATOM 16 N7 A B 398 87.992 95.377 9.857 1.00 69.44 N
ATOM 17 C5 A B 398 86.619 95.163 9.856 1.00 70.43 C
ATOM 18 C6 A B 398 85.532 95.987 10.207 1.00 70.69 C
ATOM 19 N6 A B 398 85.672 97.243 10.646 1.00 70.67 N
ATOM 20 N1 A B 398 84.284 95.470 10.091 1.00 70.12 N
ATOM 21 C2 A B 398 84.151 94.212 9.651 1.00 69.42 C
ATOM 22 N3 A B 398 85.095 93.340 9.290 1.00 70.17 N
ATOM 23 C4 A B 398 86.321 93.885 9.416 1.00 70.39 C
ATOM 24 P A B 399 88.061 88.363 5.833 1.00 74.07 P
ATOM 25 OP1 A B 399 88.633 88.950 4.593 1.00 75.03 O
ATOM 26 OP2 A B 399 86.816 87.554 5.756 1.00 73.82 O
ATOM 27 O5' A B 399 89.211 87.506 6.522 1.00 73.83 O
TER
Atoms:
C4: (95.345,97.562,14.209)
N3: (94.022,97.599,13.811)
OP1: (98.171,90.939,11.787)
OP2: (98.182,93.257,12.888)
C2: (93.384,96.712,12.982)
C1': (93.567,94.707,11.590)
C3': (93.960,93.122,9.882)
O5': (96.180,92.440,11.666)
O4': (93.568,93.436,12.214)
C5': (95.021,91.603,11.638)
P: (97.456,92.018,12.511)
C4': (93.822,92.404,11.219)
C2': (94.351,94.536,10.290)
O2': (93.960,95.514,9.346)
N1: (94.179,95.682,12.507)
O4: (95.782,98.446,14.951)
O2: (92.208,96.832,12.693)
C6: (95.505,95.583,12.877)
C5: (96.096,96.463,13.685)
O3': (92.705,93.145,9.240)
N3: (94.022,97.599,13.811)
OP1: (98.171,90.939,11.787)
OP2: (98.182,93.257,12.888)
C2: (93.384,96.712,12.982)
C1': (93.567,94.707,11.590)
C3': (93.960,93.122,9.882)
O5': (96.180,92.440,11.666)
O4': (93.568,93.436,12.214)
C5': (95.021,91.603,11.638)
P: (97.456,92.018,12.511)
C4': (93.822,92.404,11.219)
C2': (94.351,94.536,10.290)
O2': (93.960,95.514,9.346)
N1: (94.179,95.682,12.507)
O4: (95.782,98.446,14.951)
O2: (92.208,96.832,12.693)
C6: (95.505,95.583,12.877)
C5: (96.096,96.463,13.685)
O3': (92.705,93.145,9.240)
OP1: (93.655,91.692,7.413)
OP2: (92.474,93.914,6.877)
C3': (88.798,90.563,7.031)
C1': (87.716,91.951,8.594)
C5': (90.947,90.752,8.402)
O4': (88.771,91.320,9.290)
C8: (88.487,94.244,9.421)
O2': (87.015,92.102,6.301)
C6: (85.532,95.987,10.207)
C5: (86.619,95.163,9.856)
C4: (86.321,93.885,9.416)
P: (92.590,92.689,7.712)
C4': (89.478,90.420,8.390)
C2': (88.140,91.936,7.132)
C2: (84.151,94.212,9.651)
N1: (84.284,95.470,10.091)
N3: (85.095,93.340,9.290)
N6: (85.672,97.243,10.646)
N7: (87.992,95.377,9.857)
N9: (87.531,93.299,9.125)
O5': (91.177,91.967,7.673)
O3': (87.812,89.556,6.876)
OP2: (92.474,93.914,6.877)
C3': (88.798,90.563,7.031)
C1': (87.716,91.951,8.594)
C5': (90.947,90.752,8.402)
O4': (88.771,91.320,9.290)
C8: (88.487,94.244,9.421)
O2': (87.015,92.102,6.301)
C6: (85.532,95.987,10.207)
C5: (86.619,95.163,9.856)
C4: (86.321,93.885,9.416)
P: (92.590,92.689,7.712)
C4': (89.478,90.420,8.390)
C2': (88.140,91.936,7.132)
C2: (84.151,94.212,9.651)
N1: (84.284,95.470,10.091)
N3: (85.095,93.340,9.290)
N6: (85.672,97.243,10.646)
N7: (87.992,95.377,9.857)
N9: (87.531,93.299,9.125)
O5': (91.177,91.967,7.673)
O3': (87.812,89.556,6.876)
Image (generated by PyMOL):