Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0397:0398
Extra
PDB:
ATOM 1 O3' A A 396 96.790 91.279 13.721 1.00 49.57 O
ATOM 2 P U A 397 97.346 91.961 12.372 1.00 53.48 P
ATOM 3 OP1 U A 397 98.008 90.886 11.596 1.00 54.87 O
ATOM 4 OP2 U A 397 98.101 93.196 12.701 1.00 53.80 O
ATOM 5 O5' U A 397 96.032 92.378 11.581 1.00 54.19 O
ATOM 6 C5' U A 397 94.956 91.444 11.426 1.00 56.77 C
ATOM 7 C4' U A 397 93.703 92.163 11.007 1.00 58.27 C
ATOM 8 O4' U A 397 93.384 93.173 12.004 1.00 59.67 O
ATOM 9 C3' U A 397 93.776 92.893 9.672 1.00 59.03 C
ATOM 10 O3' U A 397 92.496 92.866 9.079 1.00 59.07 O
ATOM 11 C2' U A 397 94.090 94.325 10.079 1.00 59.63 C
ATOM 12 O2' U A 397 93.623 95.268 9.131 1.00 60.59 O
ATOM 13 C1' U A 397 93.307 94.442 11.384 1.00 59.49 C
ATOM 14 N1 U A 397 93.846 95.452 12.309 1.00 59.38 N
ATOM 15 C2 U A 397 93.003 96.473 12.696 1.00 59.46 C
ATOM 16 O2 U A 397 91.847 96.556 12.322 1.00 60.90 O
ATOM 17 N3 U A 397 93.560 97.395 13.542 1.00 59.64 N
ATOM 18 C4 U A 397 94.844 97.399 14.034 1.00 59.90 C
ATOM 19 O4 U A 397 95.190 98.295 14.806 1.00 61.40 O
ATOM 20 C5 U A 397 95.657 96.308 13.593 1.00 58.98 C
ATOM 21 C6 U A 397 95.144 95.394 12.770 1.00 58.48 C
ATOM 22 P A A 398 92.340 92.469 7.538 1.00 58.41 P
ATOM 23 OP1 A A 398 93.369 91.457 7.166 1.00 57.91 O
ATOM 24 OP2 A A 398 92.224 93.726 6.752 1.00 59.02 O
ATOM 25 O5' A A 398 90.918 91.770 7.525 1.00 58.34 O
TER
ATOM 1 O3' U B 397 92.496 92.866 9.079 1.00 59.07 O
ATOM 2 P A B 398 92.340 92.469 7.538 1.00 58.41 P
ATOM 3 OP1 A B 398 93.369 91.457 7.166 1.00 57.91 O
ATOM 4 OP2 A B 398 92.224 93.726 6.752 1.00 59.02 O
ATOM 5 O5' A B 398 90.918 91.770 7.525 1.00 58.34 O
ATOM 6 C5' A B 398 90.678 90.599 8.307 1.00 56.40 C
ATOM 7 C4' A B 398 89.211 90.283 8.306 1.00 56.16 C
ATOM 8 O4' A B 398 88.523 91.189 9.208 1.00 55.99 O
ATOM 9 C3' A B 398 88.531 90.428 6.949 1.00 55.75 C
ATOM 10 O3' A B 398 87.550 89.413 6.797 1.00 57.94 O
ATOM 11 C2' A B 398 87.885 91.806 7.055 1.00 54.86 C
ATOM 12 O2' A B 398 86.763 92.003 6.221 1.00 54.24 O
ATOM 13 C1' A B 398 87.469 91.820 8.519 1.00 55.58 C
ATOM 14 N9 A B 398 87.287 93.162 9.060 1.00 56.32 N
ATOM 15 C8 A B 398 88.234 94.125 9.319 1.00 56.38 C
ATOM 16 N7 A B 398 87.733 95.246 9.774 1.00 56.43 N
ATOM 17 C5 A B 398 86.366 95.004 9.825 1.00 57.46 C
ATOM 18 C6 A B 398 85.278 95.802 10.214 1.00 58.13 C
ATOM 19 N6 A B 398 85.406 97.063 10.642 1.00 59.10 N
ATOM 20 N1 A B 398 84.039 95.256 10.147 1.00 57.54 N
ATOM 21 C2 A B 398 83.918 93.996 9.715 1.00 55.82 C
ATOM 22 N3 A B 398 84.863 93.148 9.320 1.00 56.59 N
ATOM 23 C4 A B 398 86.080 93.721 9.398 1.00 57.16 C
ATOM 24 P A B 399 87.804 88.221 5.749 1.00 58.35 P
ATOM 25 OP1 A B 399 88.332 88.819 4.491 1.00 58.18 O
ATOM 26 OP2 A B 399 86.576 87.390 5.705 1.00 58.22 O
ATOM 27 O5' A B 399 88.982 87.380 6.413 1.00 57.96 O
TER
ATOM 2 P U A 397 97.346 91.961 12.372 1.00 53.48 P
ATOM 3 OP1 U A 397 98.008 90.886 11.596 1.00 54.87 O
ATOM 4 OP2 U A 397 98.101 93.196 12.701 1.00 53.80 O
ATOM 5 O5' U A 397 96.032 92.378 11.581 1.00 54.19 O
ATOM 6 C5' U A 397 94.956 91.444 11.426 1.00 56.77 C
ATOM 7 C4' U A 397 93.703 92.163 11.007 1.00 58.27 C
ATOM 8 O4' U A 397 93.384 93.173 12.004 1.00 59.67 O
ATOM 9 C3' U A 397 93.776 92.893 9.672 1.00 59.03 C
ATOM 10 O3' U A 397 92.496 92.866 9.079 1.00 59.07 O
ATOM 11 C2' U A 397 94.090 94.325 10.079 1.00 59.63 C
ATOM 12 O2' U A 397 93.623 95.268 9.131 1.00 60.59 O
ATOM 13 C1' U A 397 93.307 94.442 11.384 1.00 59.49 C
ATOM 14 N1 U A 397 93.846 95.452 12.309 1.00 59.38 N
ATOM 15 C2 U A 397 93.003 96.473 12.696 1.00 59.46 C
ATOM 16 O2 U A 397 91.847 96.556 12.322 1.00 60.90 O
ATOM 17 N3 U A 397 93.560 97.395 13.542 1.00 59.64 N
ATOM 18 C4 U A 397 94.844 97.399 14.034 1.00 59.90 C
ATOM 19 O4 U A 397 95.190 98.295 14.806 1.00 61.40 O
ATOM 20 C5 U A 397 95.657 96.308 13.593 1.00 58.98 C
ATOM 21 C6 U A 397 95.144 95.394 12.770 1.00 58.48 C
ATOM 22 P A A 398 92.340 92.469 7.538 1.00 58.41 P
ATOM 23 OP1 A A 398 93.369 91.457 7.166 1.00 57.91 O
ATOM 24 OP2 A A 398 92.224 93.726 6.752 1.00 59.02 O
ATOM 25 O5' A A 398 90.918 91.770 7.525 1.00 58.34 O
TER
ATOM 1 O3' U B 397 92.496 92.866 9.079 1.00 59.07 O
ATOM 2 P A B 398 92.340 92.469 7.538 1.00 58.41 P
ATOM 3 OP1 A B 398 93.369 91.457 7.166 1.00 57.91 O
ATOM 4 OP2 A B 398 92.224 93.726 6.752 1.00 59.02 O
ATOM 5 O5' A B 398 90.918 91.770 7.525 1.00 58.34 O
ATOM 6 C5' A B 398 90.678 90.599 8.307 1.00 56.40 C
ATOM 7 C4' A B 398 89.211 90.283 8.306 1.00 56.16 C
ATOM 8 O4' A B 398 88.523 91.189 9.208 1.00 55.99 O
ATOM 9 C3' A B 398 88.531 90.428 6.949 1.00 55.75 C
ATOM 10 O3' A B 398 87.550 89.413 6.797 1.00 57.94 O
ATOM 11 C2' A B 398 87.885 91.806 7.055 1.00 54.86 C
ATOM 12 O2' A B 398 86.763 92.003 6.221 1.00 54.24 O
ATOM 13 C1' A B 398 87.469 91.820 8.519 1.00 55.58 C
ATOM 14 N9 A B 398 87.287 93.162 9.060 1.00 56.32 N
ATOM 15 C8 A B 398 88.234 94.125 9.319 1.00 56.38 C
ATOM 16 N7 A B 398 87.733 95.246 9.774 1.00 56.43 N
ATOM 17 C5 A B 398 86.366 95.004 9.825 1.00 57.46 C
ATOM 18 C6 A B 398 85.278 95.802 10.214 1.00 58.13 C
ATOM 19 N6 A B 398 85.406 97.063 10.642 1.00 59.10 N
ATOM 20 N1 A B 398 84.039 95.256 10.147 1.00 57.54 N
ATOM 21 C2 A B 398 83.918 93.996 9.715 1.00 55.82 C
ATOM 22 N3 A B 398 84.863 93.148 9.320 1.00 56.59 N
ATOM 23 C4 A B 398 86.080 93.721 9.398 1.00 57.16 C
ATOM 24 P A B 399 87.804 88.221 5.749 1.00 58.35 P
ATOM 25 OP1 A B 399 88.332 88.819 4.491 1.00 58.18 O
ATOM 26 OP2 A B 399 86.576 87.390 5.705 1.00 58.22 O
ATOM 27 O5' A B 399 88.982 87.380 6.413 1.00 57.96 O
TER
Atoms:
C4: (94.844,97.399,14.034)
N3: (93.560,97.395,13.542)
OP1: (98.008,90.886,11.596)
OP2: (98.101,93.196,12.701)
C2: (93.003,96.473,12.696)
C1': (93.307,94.442,11.384)
C3': (93.776,92.893,9.672)
O5': (96.032,92.378,11.581)
O4': (93.384,93.173,12.004)
C5': (94.956,91.444,11.426)
P: (97.346,91.961,12.372)
C4': (93.703,92.163,11.007)
C2': (94.090,94.325,10.079)
O2': (93.623,95.268,9.131)
N1: (93.846,95.452,12.309)
O4: (95.190,98.295,14.806)
O2: (91.847,96.556,12.322)
C6: (95.144,95.394,12.770)
C5: (95.657,96.308,13.593)
O3': (92.496,92.866,9.079)
N3: (93.560,97.395,13.542)
OP1: (98.008,90.886,11.596)
OP2: (98.101,93.196,12.701)
C2: (93.003,96.473,12.696)
C1': (93.307,94.442,11.384)
C3': (93.776,92.893,9.672)
O5': (96.032,92.378,11.581)
O4': (93.384,93.173,12.004)
C5': (94.956,91.444,11.426)
P: (97.346,91.961,12.372)
C4': (93.703,92.163,11.007)
C2': (94.090,94.325,10.079)
O2': (93.623,95.268,9.131)
N1: (93.846,95.452,12.309)
O4: (95.190,98.295,14.806)
O2: (91.847,96.556,12.322)
C6: (95.144,95.394,12.770)
C5: (95.657,96.308,13.593)
O3': (92.496,92.866,9.079)
OP1: (93.369,91.457,7.166)
OP2: (92.224,93.726,6.752)
C3': (88.531,90.428,6.949)
C1': (87.469,91.820,8.519)
C5': (90.678,90.599,8.307)
O4': (88.523,91.189,9.208)
C8: (88.234,94.125,9.319)
O2': (86.763,92.003,6.221)
C6: (85.278,95.802,10.214)
C5: (86.366,95.004,9.825)
C4: (86.080,93.721,9.398)
P: (92.340,92.469,7.538)
C4': (89.211,90.283,8.306)
C2': (87.885,91.806,7.055)
C2: (83.918,93.996,9.715)
N1: (84.039,95.256,10.147)
N3: (84.863,93.148,9.320)
N6: (85.406,97.063,10.642)
N7: (87.733,95.246,9.774)
N9: (87.287,93.162,9.060)
O5': (90.918,91.770,7.525)
O3': (87.550,89.413,6.797)
OP2: (92.224,93.726,6.752)
C3': (88.531,90.428,6.949)
C1': (87.469,91.820,8.519)
C5': (90.678,90.599,8.307)
O4': (88.523,91.189,9.208)
C8: (88.234,94.125,9.319)
O2': (86.763,92.003,6.221)
C6: (85.278,95.802,10.214)
C5: (86.366,95.004,9.825)
C4: (86.080,93.721,9.398)
P: (92.340,92.469,7.538)
C4': (89.211,90.283,8.306)
C2': (87.885,91.806,7.055)
C2: (83.918,93.996,9.715)
N1: (84.039,95.256,10.147)
N3: (84.863,93.148,9.320)
N6: (85.406,97.063,10.642)
N7: (87.733,95.246,9.774)
N9: (87.287,93.162,9.060)
O5': (90.918,91.770,7.525)
O3': (87.550,89.413,6.797)
Image (generated by PyMOL):