Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A258:A228
Extra
PDB:
ATOM 1 O3' G A 257 79.117 104.281 -0.081 1.00 46.70 O
ATOM 2 P U A 258 77.652 104.218 0.558 1.00 47.02 P
ATOM 3 OP1 U A 258 77.056 102.968 0.042 1.00 47.87 O
ATOM 4 OP2 U A 258 76.940 105.507 0.346 1.00 47.45 O
ATOM 5 O5' U A 258 77.957 104.039 2.108 1.00 48.04 O
ATOM 6 C5' U A 258 78.692 102.890 2.576 1.00 49.20 C
ATOM 7 C4' U A 258 78.969 103.009 4.055 1.00 48.92 C
ATOM 8 O4' U A 258 80.032 103.977 4.302 1.00 46.19 O
ATOM 9 C3' U A 258 77.779 103.462 4.898 1.00 49.20 C
ATOM 10 O3' U A 258 77.838 102.815 6.165 1.00 54.12 O
ATOM 11 C2' U A 258 78.070 104.948 5.081 1.00 46.72 C
ATOM 12 O2' U A 258 77.453 105.484 6.232 1.00 48.58 O
ATOM 13 C1' U A 258 79.585 104.905 5.259 1.00 43.94 C
ATOM 14 N1 U A 258 80.363 106.152 5.145 1.00 40.33 N
ATOM 15 C2 U A 258 81.664 106.130 5.619 1.00 38.70 C
ATOM 16 O2 U A 258 82.198 105.122 6.048 1.00 38.31 O
ATOM 17 N3 U A 258 82.319 107.333 5.570 1.00 38.13 N
ATOM 18 C4 U A 258 81.829 108.531 5.100 1.00 37.92 C
ATOM 19 O4 U A 258 82.506 109.553 5.232 1.00 38.09 O
ATOM 20 C5 U A 258 80.498 108.469 4.588 1.00 37.39 C
ATOM 21 C6 U A 258 79.827 107.312 4.624 1.00 38.53 C
ATOM 22 P C A 259 76.502 102.213 6.823 1.00 56.88 P
ATOM 23 OP1 C A 259 75.420 103.228 6.728 1.00 55.26 O
ATOM 24 OP2 C A 259 76.898 101.681 8.151 1.00 57.11 O
ATOM 25 O5' C A 259 76.124 100.984 5.885 1.00 59.61 O
TER
ATOM 1 O3' C B 227 77.130 112.862 4.468 1.00 42.82 O
ATOM 2 P C B 228 78.590 112.521 3.901 1.00 43.71 P
ATOM 3 OP1 C B 228 78.804 113.276 2.642 1.00 43.74 O
ATOM 4 OP2 C B 228 78.756 111.051 3.914 1.00 44.26 O
ATOM 5 O5' C B 228 79.589 113.113 4.984 1.00 42.48 O
ATOM 6 C5' C B 228 80.948 112.681 5.015 1.00 40.78 C
ATOM 7 C4' C B 228 81.530 112.932 6.371 1.00 40.26 C
ATOM 8 O4' C B 228 80.817 112.147 7.358 1.00 38.52 O
ATOM 9 C3' C B 228 82.976 112.505 6.513 1.00 41.83 C
ATOM 10 O3' C B 228 83.821 113.547 5.999 1.00 41.76 O
ATOM 11 C2' C B 228 83.098 112.320 8.024 1.00 42.12 C
ATOM 12 O2' C B 228 83.265 113.532 8.744 1.00 44.61 O
ATOM 13 C1' C B 228 81.714 111.755 8.384 1.00 39.29 C
ATOM 14 N1 C B 228 81.621 110.287 8.591 1.00 35.85 N
ATOM 15 C2 C B 228 82.620 109.636 9.344 1.00 35.20 C
ATOM 16 O2 C B 228 83.513 110.308 9.883 1.00 35.14 O
ATOM 17 N3 C B 228 82.577 108.288 9.471 1.00 34.09 N
ATOM 18 C4 C B 228 81.585 107.595 8.908 1.00 32.25 C
ATOM 19 N4 C B 228 81.617 106.270 9.017 1.00 31.05 N
ATOM 20 C5 C B 228 80.528 108.232 8.194 1.00 32.91 C
ATOM 21 C6 C B 228 80.587 109.563 8.056 1.00 34.93 C
ATOM 22 P A B 229 85.204 113.186 5.250 1.00 40.73 P
ATOM 23 OP1 A B 229 85.945 114.465 5.142 1.00 40.53 O
ATOM 24 OP2 A B 229 84.937 112.395 4.022 1.00 40.86 O
ATOM 25 O5' A B 229 85.983 112.249 6.272 1.00 37.46 O
TER
ATOM 2 P U A 258 77.652 104.218 0.558 1.00 47.02 P
ATOM 3 OP1 U A 258 77.056 102.968 0.042 1.00 47.87 O
ATOM 4 OP2 U A 258 76.940 105.507 0.346 1.00 47.45 O
ATOM 5 O5' U A 258 77.957 104.039 2.108 1.00 48.04 O
ATOM 6 C5' U A 258 78.692 102.890 2.576 1.00 49.20 C
ATOM 7 C4' U A 258 78.969 103.009 4.055 1.00 48.92 C
ATOM 8 O4' U A 258 80.032 103.977 4.302 1.00 46.19 O
ATOM 9 C3' U A 258 77.779 103.462 4.898 1.00 49.20 C
ATOM 10 O3' U A 258 77.838 102.815 6.165 1.00 54.12 O
ATOM 11 C2' U A 258 78.070 104.948 5.081 1.00 46.72 C
ATOM 12 O2' U A 258 77.453 105.484 6.232 1.00 48.58 O
ATOM 13 C1' U A 258 79.585 104.905 5.259 1.00 43.94 C
ATOM 14 N1 U A 258 80.363 106.152 5.145 1.00 40.33 N
ATOM 15 C2 U A 258 81.664 106.130 5.619 1.00 38.70 C
ATOM 16 O2 U A 258 82.198 105.122 6.048 1.00 38.31 O
ATOM 17 N3 U A 258 82.319 107.333 5.570 1.00 38.13 N
ATOM 18 C4 U A 258 81.829 108.531 5.100 1.00 37.92 C
ATOM 19 O4 U A 258 82.506 109.553 5.232 1.00 38.09 O
ATOM 20 C5 U A 258 80.498 108.469 4.588 1.00 37.39 C
ATOM 21 C6 U A 258 79.827 107.312 4.624 1.00 38.53 C
ATOM 22 P C A 259 76.502 102.213 6.823 1.00 56.88 P
ATOM 23 OP1 C A 259 75.420 103.228 6.728 1.00 55.26 O
ATOM 24 OP2 C A 259 76.898 101.681 8.151 1.00 57.11 O
ATOM 25 O5' C A 259 76.124 100.984 5.885 1.00 59.61 O
TER
ATOM 1 O3' C B 227 77.130 112.862 4.468 1.00 42.82 O
ATOM 2 P C B 228 78.590 112.521 3.901 1.00 43.71 P
ATOM 3 OP1 C B 228 78.804 113.276 2.642 1.00 43.74 O
ATOM 4 OP2 C B 228 78.756 111.051 3.914 1.00 44.26 O
ATOM 5 O5' C B 228 79.589 113.113 4.984 1.00 42.48 O
ATOM 6 C5' C B 228 80.948 112.681 5.015 1.00 40.78 C
ATOM 7 C4' C B 228 81.530 112.932 6.371 1.00 40.26 C
ATOM 8 O4' C B 228 80.817 112.147 7.358 1.00 38.52 O
ATOM 9 C3' C B 228 82.976 112.505 6.513 1.00 41.83 C
ATOM 10 O3' C B 228 83.821 113.547 5.999 1.00 41.76 O
ATOM 11 C2' C B 228 83.098 112.320 8.024 1.00 42.12 C
ATOM 12 O2' C B 228 83.265 113.532 8.744 1.00 44.61 O
ATOM 13 C1' C B 228 81.714 111.755 8.384 1.00 39.29 C
ATOM 14 N1 C B 228 81.621 110.287 8.591 1.00 35.85 N
ATOM 15 C2 C B 228 82.620 109.636 9.344 1.00 35.20 C
ATOM 16 O2 C B 228 83.513 110.308 9.883 1.00 35.14 O
ATOM 17 N3 C B 228 82.577 108.288 9.471 1.00 34.09 N
ATOM 18 C4 C B 228 81.585 107.595 8.908 1.00 32.25 C
ATOM 19 N4 C B 228 81.617 106.270 9.017 1.00 31.05 N
ATOM 20 C5 C B 228 80.528 108.232 8.194 1.00 32.91 C
ATOM 21 C6 C B 228 80.587 109.563 8.056 1.00 34.93 C
ATOM 22 P A B 229 85.204 113.186 5.250 1.00 40.73 P
ATOM 23 OP1 A B 229 85.945 114.465 5.142 1.00 40.53 O
ATOM 24 OP2 A B 229 84.937 112.395 4.022 1.00 40.86 O
ATOM 25 O5' A B 229 85.983 112.249 6.272 1.00 37.46 O
TER
Atoms:
C4: (81.829,108.531,5.100)
N3: (82.319,107.333,5.570)
OP1: (77.056,102.968,0.042)
OP2: (76.940,105.507,0.346)
C2: (81.664,106.130,5.619)
C1': (79.585,104.905,5.259)
C3': (77.779,103.462,4.898)
O5': (77.957,104.039,2.108)
O4': (80.032,103.977,4.302)
C5': (78.692,102.890,2.576)
P: (77.652,104.218,0.558)
C4': (78.969,103.009,4.055)
C2': (78.070,104.948,5.081)
O2': (77.453,105.484,6.232)
N1: (80.363,106.152,5.145)
O4: (82.506,109.553,5.232)
O2: (82.198,105.122,6.048)
C6: (79.827,107.312,4.624)
C5: (80.498,108.469,4.588)
O3': (77.838,102.815,6.165)
N3: (82.319,107.333,5.570)
OP1: (77.056,102.968,0.042)
OP2: (76.940,105.507,0.346)
C2: (81.664,106.130,5.619)
C1': (79.585,104.905,5.259)
C3': (77.779,103.462,4.898)
O5': (77.957,104.039,2.108)
O4': (80.032,103.977,4.302)
C5': (78.692,102.890,2.576)
P: (77.652,104.218,0.558)
C4': (78.969,103.009,4.055)
C2': (78.070,104.948,5.081)
O2': (77.453,105.484,6.232)
N1: (80.363,106.152,5.145)
O4: (82.506,109.553,5.232)
O2: (82.198,105.122,6.048)
C6: (79.827,107.312,4.624)
C5: (80.498,108.469,4.588)
O3': (77.838,102.815,6.165)
C2: (82.620,109.636,9.344)
OP1: (78.804,113.276,2.642)
OP2: (78.756,111.051,3.914)
C4: (81.585,107.595,8.908)
O5': (79.589,113.113,4.984)
C3': (82.976,112.505,6.513)
C1': (81.714,111.755,8.384)
O4': (80.817,112.147,7.358)
C5': (80.948,112.681,5.015)
P: (78.590,112.521,3.901)
O2: (83.513,110.308,9.883)
C4': (81.530,112.932,6.371)
C2': (83.098,112.320,8.024)
O2': (83.265,113.532,8.744)
N1: (81.621,110.287,8.591)
N3: (82.577,108.288,9.471)
N4: (81.617,106.270,9.017)
C6: (80.587,109.563,8.056)
C5: (80.528,108.232,8.194)
O3': (83.821,113.547,5.999)
OP1: (78.804,113.276,2.642)
OP2: (78.756,111.051,3.914)
C4: (81.585,107.595,8.908)
O5': (79.589,113.113,4.984)
C3': (82.976,112.505,6.513)
C1': (81.714,111.755,8.384)
O4': (80.817,112.147,7.358)
C5': (80.948,112.681,5.015)
P: (78.590,112.521,3.901)
O2: (83.513,110.308,9.883)
C4': (81.530,112.932,6.371)
C2': (83.098,112.320,8.024)
O2': (83.265,113.532,8.744)
N1: (81.621,110.287,8.591)
N3: (82.577,108.288,9.471)
N4: (81.617,106.270,9.017)
C6: (80.587,109.563,8.056)
C5: (80.528,108.232,8.194)
O3': (83.821,113.547,5.999)
Image (generated by PyMOL):