ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q86:A258:A228

Extra

PDB:
ATOM 1 O3' G A 257 79.636 104.305 0.152 1.00 59.28 O
ATOM 2 P U A 258 78.155 104.263 0.762 1.00 59.04 P
ATOM 3 OP1 U A 258 77.515 103.014 0.277 1.00 60.79 O
ATOM 4 OP2 U A 258 77.498 105.570 0.504 1.00 57.95 O
ATOM 5 O5' U A 258 78.426 104.104 2.320 1.00 60.64 O
ATOM 6 C5' U A 258 79.175 102.977 2.815 1.00 61.86 C
ATOM 7 C4' U A 258 79.413 103.107 4.301 1.00 63.06 C
ATOM 8 O4' U A 258 80.459 104.092 4.558 1.00 60.37 O
ATOM 9 C3' U A 258 78.205 103.541 5.129 1.00 64.41 C
ATOM 10 O3' U A 258 78.249 102.872 6.389 1.00 69.40 O
ATOM 11 C2' U A 258 78.475 105.032 5.324 1.00 62.03 C
ATOM 12 O2' U A 258 77.824 105.595 6.446 1.00 63.66 O
ATOM 13 C1' U A 258 79.990 105.013 5.513 1.00 58.75 C
ATOM 14 N1 U A 258 80.729 106.281 5.388 1.00 54.51 N
ATOM 15 C2 U A 258 82.058 106.295 5.802 1.00 51.66 C
ATOM 16 O2 U A 258 82.654 105.299 6.168 1.00 49.12 O
ATOM 17 N3 U A 258 82.664 107.523 5.761 1.00 50.15 N
ATOM 18 C4 U A 258 82.105 108.716 5.340 1.00 51.43 C
ATOM 19 O4 U A 258 82.739 109.763 5.485 1.00 51.08 O
ATOM 20 C5 U A 258 80.752 108.612 4.876 1.00 52.10 C
ATOM 21 C6 U A 258 80.126 107.429 4.915 1.00 53.53 C
ATOM 22 P C A 259 76.897 102.305 7.049 1.00 73.57 P
ATOM 23 OP1 C A 259 75.811 103.315 6.921 1.00 71.88 O
ATOM 24 OP2 C A 259 77.283 101.799 8.391 1.00 74.08 O
ATOM 25 O5' C A 259 76.496 101.057 6.145 1.00 76.80 O
TER

ATOM 1 O3' C B 227 77.466 113.051 4.833 1.00 58.33 O
ATOM 2 P C B 228 78.892 112.649 4.212 1.00 58.95 P
ATOM 3 OP1 C B 228 79.013 113.406 2.936 1.00 58.93 O
ATOM 4 OP2 C B 228 79.027 111.165 4.210 1.00 57.72 O
ATOM 5 O5' C B 228 79.934 113.225 5.267 1.00 57.09 O
ATOM 6 C5' C B 228 81.291 112.760 5.308 1.00 54.32 C
ATOM 7 C4' C B 228 81.874 113.043 6.664 1.00 53.97 C
ATOM 8 O4' C B 228 81.177 112.248 7.653 1.00 53.49 O
ATOM 9 C3' C B 228 83.336 112.690 6.853 1.00 55.13 C
ATOM 10 O3' C B 228 84.164 113.756 6.379 1.00 56.58 O
ATOM 11 C2' C B 228 83.431 112.518 8.368 1.00 54.61 C
ATOM 12 O2' C B 228 83.504 113.750 9.070 1.00 55.53 O
ATOM 13 C1' C B 228 82.075 111.880 8.690 1.00 53.44 C
ATOM 14 N1 C B 228 82.044 110.405 8.850 1.00 51.55 N
ATOM 15 C2 C B 228 83.089 109.744 9.550 1.00 51.15 C
ATOM 16 O2 C B 228 84.028 110.405 10.024 1.00 51.04 O
ATOM 17 N3 C B 228 83.036 108.397 9.686 1.00 49.60 N
ATOM 18 C4 C B 228 82.012 107.711 9.169 1.00 49.33 C
ATOM 19 N4 C B 228 82.009 106.391 9.316 1.00 49.14 N
ATOM 20 C5 C B 228 80.946 108.351 8.471 1.00 49.55 C
ATOM 21 C6 C B 228 81.002 109.682 8.335 1.00 50.67 C
ATOM 22 P A B 229 85.514 113.430 5.569 1.00 56.71 P
ATOM 23 OP1 A B 229 86.267 114.705 5.459 1.00 56.04 O
ATOM 24 OP2 A B 229 85.136 112.696 4.338 1.00 57.20 O
ATOM 25 O5' A B 229 86.318 112.442 6.527 1.00 52.52 O
TER

Atoms:
C4: (82.105,108.716,5.340)
N3: (82.664,107.523,5.761)
OP1: (77.515,103.014,0.277)
OP2: (77.498,105.570,0.504)
C2: (82.058,106.295,5.802)
C1': (79.990,105.013,5.513)
C3': (78.205,103.541,5.129)
O5': (78.426,104.104,2.320)
O4': (80.459,104.092,4.558)
C5': (79.175,102.977,2.815)
P: (78.155,104.263,0.762)
C4': (79.413,103.107,4.301)
C2': (78.475,105.032,5.324)
O2': (77.824,105.595,6.446)
N1: (80.729,106.281,5.388)
O4: (82.739,109.763,5.485)
O2: (82.654,105.299,6.168)
C6: (80.126,107.429,4.915)
C5: (80.752,108.612,4.876)
O3': (78.249,102.872,6.389)
C2: (83.089,109.744,9.550)
OP1: (79.013,113.406,2.936)
OP2: (79.027,111.165,4.210)
C4: (82.012,107.711,9.169)
O5': (79.934,113.225,5.267)
C3': (83.336,112.690,6.853)
C1': (82.075,111.880,8.690)
O4': (81.177,112.248,7.653)
C5': (81.291,112.760,5.308)
P: (78.892,112.649,4.212)
O2: (84.028,110.405,10.024)
C4': (81.874,113.043,6.664)
C2': (83.431,112.518,8.368)
O2': (83.504,113.750,9.070)
N1: (82.044,110.405,8.850)
N3: (83.036,108.397,9.686)
N4: (82.009,106.391,9.316)
C6: (81.002,109.682,8.335)
C5: (80.946,108.351,8.471)
O3': (84.164,113.756,6.379)
Image (generated by PyMOL):
PyMOL image
show in jmol