ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3IQR:A13:A41

Extra

PDB:
ATOM 1 O3' G A 12 45.295 65.375 11.265 1.00100.88 O
ATOM 2 P A A 13 43.864 66.014 10.857 1.00104.61 P
ATOM 3 OP1 A A 13 42.898 66.053 11.986 1.00105.09 O
ATOM 4 OP2 A A 13 43.461 65.356 9.588 1.00104.79 O
ATOM 5 O5' A A 13 44.208 67.535 10.526 1.00104.32 O
ATOM 6 C5' A A 13 43.476 68.240 9.526 1.00104.15 C
ATOM 7 C4' A A 13 43.515 69.724 9.791 1.00103.12 C
ATOM 8 O4' A A 13 42.844 69.953 11.054 1.00104.14 O
ATOM 9 C3' A A 13 44.925 70.300 9.911 1.00101.79 C
ATOM 10 O3' A A 13 45.417 70.996 8.769 1.00 96.73 O
ATOM 11 C2' A A 13 45.006 71.022 11.257 1.00103.20 C
ATOM 12 O2' A A 13 45.074 72.430 11.140 1.00103.24 O
ATOM 13 C1' A A 13 43.676 70.684 11.929 1.00104.60 C
ATOM 14 N9 A A 13 43.876 69.914 13.154 1.00105.91 N
ATOM 15 C8 A A 13 43.268 68.751 13.566 1.00106.06 C
ATOM 16 N7 A A 13 43.693 68.319 14.731 1.00106.18 N
ATOM 17 C5 A A 13 44.644 69.262 15.110 1.00106.73 C
ATOM 18 C6 A A 13 45.469 69.377 16.245 1.00106.56 C
ATOM 19 N6 A A 13 45.471 68.499 17.252 1.00106.64 N
ATOM 20 N1 A A 13 46.306 70.438 16.309 1.00106.28 N
ATOM 21 C2 A A 13 46.309 71.316 15.300 1.00105.86 C
ATOM 22 N3 A A 13 45.584 71.317 14.185 1.00106.57 N
ATOM 23 C4 A A 13 44.763 70.249 14.150 1.00106.78 C
ATOM 24 P G A 14 47.007 71.134 8.549 1.00 92.91 P
ATOM 25 OP1 G A 14 47.230 71.591 7.155 1.00 93.14 O
ATOM 26 OP2 G A 14 47.667 69.888 9.033 1.00 92.24 O
ATOM 27 O5' G A 14 47.435 72.329 9.508 1.00 89.13 O
TER

ATOM 1 O3' C B 40 49.074 76.149 21.784 1.00 67.21 O
ATOM 2 P G B 41 47.973 75.598 22.806 1.00 66.79 P
ATOM 3 OP1 G B 41 47.094 76.724 23.202 1.00 68.22 O
ATOM 4 OP2 G B 41 48.716 74.852 23.848 1.00 66.26 O
ATOM 5 O5' G B 41 47.121 74.566 21.941 1.00 64.47 O
ATOM 6 C5' G B 41 46.261 75.024 20.905 1.00 63.45 C
ATOM 7 C4' G B 41 45.685 73.858 20.132 1.00 62.39 C
ATOM 8 O4' G B 41 46.761 73.150 19.463 1.00 62.14 O
ATOM 9 C3' G B 41 44.987 72.784 20.955 1.00 61.14 C
ATOM 10 O3' G B 41 43.627 73.105 21.214 1.00 58.16 O
ATOM 11 C2' G B 41 45.092 71.569 20.047 1.00 61.08 C
ATOM 12 O2' G B 41 44.138 71.607 19.014 1.00 62.01 O
ATOM 13 C1' G B 41 46.480 71.763 19.445 1.00 61.76 C
ATOM 14 N9 G B 41 47.513 71.074 20.207 1.00 62.94 N
ATOM 15 C8 G B 41 48.488 71.638 20.994 1.00 63.10 C
ATOM 16 N7 G B 41 49.276 70.754 21.546 1.00 63.25 N
ATOM 17 C5 G B 41 48.790 69.535 21.095 1.00 63.25 C
ATOM 18 C6 G B 41 49.240 68.213 21.352 1.00 63.83 C
ATOM 19 O6 G B 41 50.194 67.842 22.054 1.00 63.59 O
ATOM 20 N1 G B 41 48.454 67.273 20.692 1.00 64.29 N
ATOM 21 C2 G B 41 47.377 67.566 19.888 1.00 64.08 C
ATOM 22 N2 G B 41 46.739 66.527 19.338 1.00 64.05 N
ATOM 23 N3 G B 41 46.953 68.792 19.641 1.00 64.03 N
ATOM 24 C4 G B 41 47.700 69.718 20.271 1.00 63.30 C
ATOM 25 P G B 42 42.876 72.416 22.452 1.00 56.39 P
ATOM 26 OP1 G B 42 41.478 72.911 22.474 1.00 57.12 O
ATOM 27 OP2 G B 42 43.730 72.572 23.647 1.00 55.94 O
ATOM 28 O5' G B 42 42.820 70.874 22.067 1.00 56.99 O
TER

Atoms:
OP1: (42.898,66.053,11.986)
OP2: (43.461,65.356,9.588)
C3': (44.925,70.300,9.911)
C1': (43.676,70.684,11.929)
C5': (43.476,68.240,9.526)
O4': (42.844,69.953,11.054)
C8: (43.268,68.751,13.566)
O2': (45.074,72.430,11.140)
C6: (45.469,69.377,16.245)
C5: (44.644,69.262,15.110)
C4: (44.763,70.249,14.150)
P: (43.864,66.014,10.857)
C4': (43.515,69.724,9.791)
C2': (45.006,71.022,11.257)
C2: (46.309,71.316,15.300)
N1: (46.306,70.438,16.309)
N3: (45.584,71.317,14.185)
N6: (45.471,68.499,17.252)
N7: (43.693,68.319,14.731)
N9: (43.876,69.914,13.154)
O5': (44.208,67.535,10.526)
O3': (45.417,70.996,8.769)
OP1: (47.094,76.724,23.202)
OP2: (48.716,74.852,23.848)
C3': (44.987,72.784,20.955)
C1': (46.480,71.763,19.445)
C5': (46.261,75.024,20.905)
O6: (50.194,67.842,22.054)
O4': (46.761,73.150,19.463)
C8: (48.488,71.638,20.994)
C2: (47.377,67.566,19.888)
C6: (49.240,68.213,21.352)
C5: (48.790,69.535,21.095)
C4: (47.700,69.718,20.271)
P: (47.973,75.598,22.806)
C4': (45.685,73.858,20.132)
C2': (45.092,71.569,20.047)
O2': (44.138,71.607,19.014)
N1: (48.454,67.273,20.692)
N2: (46.739,66.527,19.338)
N3: (46.953,68.792,19.641)
N7: (49.276,70.754,21.546)
N9: (47.513,71.074,20.207)
O5': (47.121,74.566,21.941)
O3': (43.627,73.105,21.214)
Image (generated by PyMOL):
PyMOL image
show in jmol