ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A863:A738

Extra

PDB:
ATOM 1 O3' C A 862 62.446 1.746 1.940 1.00 54.40 O
ATOM 2 P A A 863 63.098 2.356 3.270 1.00 57.95 P
ATOM 3 OP1 A A 863 63.132 1.246 4.258 1.00 59.17 O
ATOM 4 OP2 A A 863 62.371 3.602 3.607 1.00 55.91 O
ATOM 5 O5' A A 863 64.595 2.681 2.810 1.00 58.15 O
ATOM 6 C5' A A 863 65.450 1.645 2.303 1.00 59.48 C
ATOM 7 C4' A A 863 66.455 2.207 1.320 1.00 58.97 C
ATOM 8 O4' A A 863 65.749 2.824 0.211 1.00 60.86 O
ATOM 9 C3' A A 863 67.401 3.290 1.832 1.00 57.06 C
ATOM 10 O3' A A 863 68.550 2.742 2.477 1.00 54.63 O
ATOM 11 C2' A A 863 67.770 4.030 0.548 1.00 55.20 C
ATOM 12 O2' A A 863 68.775 3.374 -0.210 1.00 54.60 O
ATOM 13 C1' A A 863 66.452 3.977 -0.223 1.00 58.48 C
ATOM 14 N9 A A 863 65.612 5.141 0.065 1.00 57.76 N
ATOM 15 C8 A A 863 64.685 5.234 1.070 1.00 57.55 C
ATOM 16 N7 A A 863 64.049 6.375 1.099 1.00 62.09 N
ATOM 17 C5 A A 863 64.596 7.089 0.052 1.00 59.51 C
ATOM 18 C6 A A 863 64.330 8.365 -0.440 1.00 59.84 C
ATOM 19 N6 A A 863 63.420 9.184 0.096 1.00 62.45 N
ATOM 20 N1 A A 863 65.034 8.783 -1.514 1.00 61.52 N
ATOM 21 C2 A A 863 65.946 7.952 -2.043 1.00 64.60 C
ATOM 22 N3 A A 863 66.291 6.723 -1.663 1.00 63.46 N
ATOM 23 C4 A A 863 65.567 6.345 -0.595 1.00 59.48 C
ATOM 24 P A A 864 69.162 3.464 3.781 1.00 53.62 P
ATOM 25 OP1 A A 864 70.193 2.597 4.391 1.00 56.48 O
ATOM 26 OP2 A A 864 68.006 3.898 4.598 1.00 56.96 O
ATOM 27 O5' A A 864 69.892 4.758 3.205 1.00 53.80 O
TER

ATOM 1 O3' A B 737 72.364 14.997 -8.215 1.00 46.51 O
ATOM 2 P G B 738 71.639 13.862 -9.081 1.00 41.50 P
ATOM 3 OP1 G B 738 72.687 13.104 -9.790 1.00 44.56 O
ATOM 4 OP2 G B 738 70.574 14.535 -9.870 1.00 42.36 O
ATOM 5 O5' G B 738 71.004 12.912 -7.955 1.00 43.70 O
ATOM 6 C5' G B 738 71.842 12.154 -7.061 1.00 42.88 C
ATOM 7 C4' G B 738 71.010 11.302 -6.121 1.00 47.44 C
ATOM 8 O4' G B 738 70.297 12.150 -5.173 1.00 49.61 O
ATOM 9 C3' G B 738 69.928 10.422 -6.740 1.00 43.70 C
ATOM 10 O3' G B 738 70.405 9.167 -7.204 1.00 42.20 O
ATOM 11 C2' G B 738 68.977 10.215 -5.569 1.00 48.60 C
ATOM 12 O2' G B 738 69.474 9.233 -4.682 1.00 51.76 O
ATOM 13 C1' G B 738 69.026 11.573 -4.873 1.00 48.98 C
ATOM 14 N9 G B 738 67.978 12.456 -5.383 1.00 53.18 N
ATOM 15 C8 G B 738 68.151 13.503 -6.258 1.00 55.69 C
ATOM 16 N7 G B 738 67.043 14.119 -6.549 1.00 53.69 N
ATOM 17 C5 G B 738 66.075 13.443 -5.829 1.00 51.59 C
ATOM 18 C6 G B 738 64.682 13.664 -5.753 1.00 55.89 C
ATOM 19 O6 G B 738 63.998 14.534 -6.336 1.00 48.74 O
ATOM 20 N1 G B 738 64.072 12.751 -4.906 1.00 59.79 N
ATOM 21 C2 G B 738 64.721 11.747 -4.226 1.00 59.90 C
ATOM 22 N2 G B 738 63.944 10.966 -3.449 1.00 55.19 N
ATOM 23 N3 G B 738 66.026 11.528 -4.298 1.00 50.94 N
ATOM 24 C4 G B 738 66.634 12.408 -5.106 1.00 45.76 C
ATOM 25 P C B 739 69.524 8.317 -8.254 1.00 65.21 P
ATOM 26 OP1 C B 739 70.277 7.072 -8.568 1.00 69.14 O
ATOM 27 OP2 C B 739 69.169 9.242 -9.354 1.00 52.07 O
ATOM 28 O5' C B 739 68.178 7.929 -7.472 1.00 55.15 O
TER

Atoms:
OP1: (63.132,1.246,4.258)
OP2: (62.371,3.602,3.607)
C3': (67.401,3.290,1.832)
C1': (66.452,3.977,-0.223)
C5': (65.450,1.645,2.303)
O4': (65.749,2.824,0.211)
C8: (64.685,5.234,1.070)
O2': (68.775,3.374,-0.210)
C6: (64.330,8.365,-0.440)
C5: (64.596,7.089,0.052)
C4: (65.567,6.345,-0.595)
P: (63.098,2.356,3.270)
C4': (66.455,2.207,1.320)
C2': (67.770,4.030,0.548)
C2: (65.946,7.952,-2.043)
N1: (65.034,8.783,-1.514)
N3: (66.291,6.723,-1.663)
N6: (63.420,9.184,0.096)
N7: (64.049,6.375,1.099)
N9: (65.612,5.141,0.065)
O5': (64.595,2.681,2.810)
O3': (68.550,2.742,2.477)
OP1: (72.687,13.104,-9.790)
OP2: (70.574,14.535,-9.870)
C3': (69.928,10.422,-6.740)
C1': (69.026,11.573,-4.873)
C5': (71.842,12.154,-7.061)
O6: (63.998,14.534,-6.336)
O4': (70.297,12.150,-5.173)
C8: (68.151,13.503,-6.258)
C2: (64.721,11.747,-4.226)
C6: (64.682,13.664,-5.753)
C5: (66.075,13.443,-5.829)
C4: (66.634,12.408,-5.106)
P: (71.639,13.862,-9.081)
C4': (71.010,11.302,-6.121)
C2': (68.977,10.215,-5.569)
O2': (69.474,9.233,-4.682)
N1: (64.072,12.751,-4.906)
N2: (63.944,10.966,-3.449)
N3: (66.026,11.528,-4.298)
N7: (67.043,14.119,-6.549)
N9: (67.978,12.456,-5.383)
O5': (71.004,12.912,-7.955)
O3': (70.405,9.167,-7.204)
Image (generated by PyMOL):
PyMOL image
show in jmol