Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A36:A35
Extra
PDB:
ATOM 1 O3' C A 35 6.031 21.297 8.951 1.00 23.96 O
ATOM 2 P U A 36 7.545 21.802 8.901 1.00 26.70 P
ATOM 3 OP1 U A 36 7.531 23.156 9.484 1.00 26.93 O
ATOM 4 OP2 U A 36 8.082 21.612 7.532 1.00 25.00 O
ATOM 5 O5' U A 36 8.299 20.823 9.912 1.00 25.55 O
ATOM 6 C5' U A 36 8.050 20.887 11.311 1.00 24.16 C
ATOM 7 C4' U A 36 8.585 19.653 12.005 1.00 21.45 C
ATOM 8 O4' U A 36 7.971 18.463 11.431 1.00 22.38 O
ATOM 9 C3' U A 36 10.072 19.376 11.858 1.00 22.73 C
ATOM 10 O3' U A 36 10.845 20.123 12.799 1.00 23.34 O
ATOM 11 C2' U A 36 10.136 17.895 12.196 1.00 19.59 C
ATOM 12 O2' U A 36 9.952 17.713 13.569 1.00 19.61 O
ATOM 13 C1' U A 36 8.878 17.367 11.512 1.00 19.68 C
ATOM 14 N1 U A 36 9.123 16.859 10.157 1.00 18.48 N
ATOM 15 C2 U A 36 9.636 15.574 10.020 1.00 17.36 C
ATOM 16 O2 U A 36 9.930 14.862 10.967 1.00 16.91 O
ATOM 17 N3 U A 36 9.794 15.153 8.726 1.00 16.05 N
ATOM 18 C4 U A 36 9.507 15.862 7.571 1.00 16.11 C
ATOM 19 O4 U A 36 9.679 15.322 6.462 1.00 15.90 O
ATOM 20 C5 U A 36 8.995 17.179 7.796 1.00 16.34 C
ATOM 21 C6 U A 36 8.832 17.627 9.048 1.00 16.75 C
ATOM 22 P A A 37 12.365 20.517 12.450 1.00 25.19 P
ATOM 23 OP1 A A 37 12.846 21.398 13.550 1.00 27.50 O
ATOM 24 OP2 A A 37 12.491 20.983 11.045 1.00 24.46 O
ATOM 25 O5' A A 37 13.148 19.125 12.569 1.00 22.18 O
TER
ATOM 1 O3' U B 34 4.958 17.936 4.127 1.00 22.14 O
ATOM 2 P C B 35 6.149 18.965 4.371 1.00 25.95 P
ATOM 3 OP1 C B 35 5.898 20.166 3.536 1.00 23.44 O
ATOM 4 OP2 C B 35 7.459 18.286 4.288 1.00 25.26 O
ATOM 5 O5' C B 35 5.932 19.376 5.884 1.00 22.51 O
ATOM 6 C5' C B 35 4.862 20.228 6.238 1.00 24.64 C
ATOM 7 C4' C B 35 4.500 19.987 7.664 1.00 23.18 C
ATOM 8 O4' C B 35 3.946 18.653 7.796 1.00 22.19 O
ATOM 9 C3' C B 35 5.714 19.971 8.569 1.00 23.50 C
ATOM 10 O3' C B 35 6.031 21.297 8.951 1.00 23.96 O
ATOM 11 C2' C B 35 5.211 19.146 9.739 1.00 22.22 C
ATOM 12 O2' C B 35 4.390 19.925 10.581 1.00 23.29 O
ATOM 13 C1' C B 35 4.379 18.081 9.020 1.00 20.79 C
ATOM 14 N1 C B 35 5.148 16.857 8.718 1.00 18.62 N
ATOM 15 C2 C B 35 5.579 16.061 9.782 1.00 18.06 C
ATOM 16 O2 C B 35 5.294 16.403 10.944 1.00 18.10 O
ATOM 17 N3 C B 35 6.286 14.924 9.529 1.00 18.43 N
ATOM 18 C4 C B 35 6.541 14.559 8.278 1.00 16.95 C
ATOM 19 N4 C B 35 7.187 13.390 8.096 1.00 16.78 N
ATOM 20 C5 C B 35 6.127 15.362 7.156 1.00 18.20 C
ATOM 21 C6 C B 35 5.435 16.496 7.425 1.00 18.70 C
ATOM 22 P U B 36 7.545 21.802 8.901 1.00 26.70 P
ATOM 23 OP1 U B 36 7.531 23.156 9.484 1.00 26.93 O
ATOM 24 OP2 U B 36 8.082 21.612 7.532 1.00 25.00 O
ATOM 25 O5' U B 36 8.299 20.823 9.912 1.00 25.55 O
TER
ATOM 2 P U A 36 7.545 21.802 8.901 1.00 26.70 P
ATOM 3 OP1 U A 36 7.531 23.156 9.484 1.00 26.93 O
ATOM 4 OP2 U A 36 8.082 21.612 7.532 1.00 25.00 O
ATOM 5 O5' U A 36 8.299 20.823 9.912 1.00 25.55 O
ATOM 6 C5' U A 36 8.050 20.887 11.311 1.00 24.16 C
ATOM 7 C4' U A 36 8.585 19.653 12.005 1.00 21.45 C
ATOM 8 O4' U A 36 7.971 18.463 11.431 1.00 22.38 O
ATOM 9 C3' U A 36 10.072 19.376 11.858 1.00 22.73 C
ATOM 10 O3' U A 36 10.845 20.123 12.799 1.00 23.34 O
ATOM 11 C2' U A 36 10.136 17.895 12.196 1.00 19.59 C
ATOM 12 O2' U A 36 9.952 17.713 13.569 1.00 19.61 O
ATOM 13 C1' U A 36 8.878 17.367 11.512 1.00 19.68 C
ATOM 14 N1 U A 36 9.123 16.859 10.157 1.00 18.48 N
ATOM 15 C2 U A 36 9.636 15.574 10.020 1.00 17.36 C
ATOM 16 O2 U A 36 9.930 14.862 10.967 1.00 16.91 O
ATOM 17 N3 U A 36 9.794 15.153 8.726 1.00 16.05 N
ATOM 18 C4 U A 36 9.507 15.862 7.571 1.00 16.11 C
ATOM 19 O4 U A 36 9.679 15.322 6.462 1.00 15.90 O
ATOM 20 C5 U A 36 8.995 17.179 7.796 1.00 16.34 C
ATOM 21 C6 U A 36 8.832 17.627 9.048 1.00 16.75 C
ATOM 22 P A A 37 12.365 20.517 12.450 1.00 25.19 P
ATOM 23 OP1 A A 37 12.846 21.398 13.550 1.00 27.50 O
ATOM 24 OP2 A A 37 12.491 20.983 11.045 1.00 24.46 O
ATOM 25 O5' A A 37 13.148 19.125 12.569 1.00 22.18 O
TER
ATOM 1 O3' U B 34 4.958 17.936 4.127 1.00 22.14 O
ATOM 2 P C B 35 6.149 18.965 4.371 1.00 25.95 P
ATOM 3 OP1 C B 35 5.898 20.166 3.536 1.00 23.44 O
ATOM 4 OP2 C B 35 7.459 18.286 4.288 1.00 25.26 O
ATOM 5 O5' C B 35 5.932 19.376 5.884 1.00 22.51 O
ATOM 6 C5' C B 35 4.862 20.228 6.238 1.00 24.64 C
ATOM 7 C4' C B 35 4.500 19.987 7.664 1.00 23.18 C
ATOM 8 O4' C B 35 3.946 18.653 7.796 1.00 22.19 O
ATOM 9 C3' C B 35 5.714 19.971 8.569 1.00 23.50 C
ATOM 10 O3' C B 35 6.031 21.297 8.951 1.00 23.96 O
ATOM 11 C2' C B 35 5.211 19.146 9.739 1.00 22.22 C
ATOM 12 O2' C B 35 4.390 19.925 10.581 1.00 23.29 O
ATOM 13 C1' C B 35 4.379 18.081 9.020 1.00 20.79 C
ATOM 14 N1 C B 35 5.148 16.857 8.718 1.00 18.62 N
ATOM 15 C2 C B 35 5.579 16.061 9.782 1.00 18.06 C
ATOM 16 O2 C B 35 5.294 16.403 10.944 1.00 18.10 O
ATOM 17 N3 C B 35 6.286 14.924 9.529 1.00 18.43 N
ATOM 18 C4 C B 35 6.541 14.559 8.278 1.00 16.95 C
ATOM 19 N4 C B 35 7.187 13.390 8.096 1.00 16.78 N
ATOM 20 C5 C B 35 6.127 15.362 7.156 1.00 18.20 C
ATOM 21 C6 C B 35 5.435 16.496 7.425 1.00 18.70 C
ATOM 22 P U B 36 7.545 21.802 8.901 1.00 26.70 P
ATOM 23 OP1 U B 36 7.531 23.156 9.484 1.00 26.93 O
ATOM 24 OP2 U B 36 8.082 21.612 7.532 1.00 25.00 O
ATOM 25 O5' U B 36 8.299 20.823 9.912 1.00 25.55 O
TER
Atoms:
C4: (9.507,15.862,7.571)
N3: (9.794,15.153,8.726)
OP1: (7.531,23.156,9.484)
OP2: (8.082,21.612,7.532)
C2: (9.636,15.574,10.020)
C1': (8.878,17.367,11.512)
C3': (10.072,19.376,11.858)
O5': (8.299,20.823,9.912)
O4': (7.971,18.463,11.431)
C5': (8.050,20.887,11.311)
P: (7.545,21.802,8.901)
C4': (8.585,19.653,12.005)
C2': (10.136,17.895,12.196)
O2': (9.952,17.713,13.569)
N1: (9.123,16.859,10.157)
O4: (9.679,15.322,6.462)
O2: (9.930,14.862,10.967)
C6: (8.832,17.627,9.048)
C5: (8.995,17.179,7.796)
O3': (10.845,20.123,12.799)
N3: (9.794,15.153,8.726)
OP1: (7.531,23.156,9.484)
OP2: (8.082,21.612,7.532)
C2: (9.636,15.574,10.020)
C1': (8.878,17.367,11.512)
C3': (10.072,19.376,11.858)
O5': (8.299,20.823,9.912)
O4': (7.971,18.463,11.431)
C5': (8.050,20.887,11.311)
P: (7.545,21.802,8.901)
C4': (8.585,19.653,12.005)
C2': (10.136,17.895,12.196)
O2': (9.952,17.713,13.569)
N1: (9.123,16.859,10.157)
O4: (9.679,15.322,6.462)
O2: (9.930,14.862,10.967)
C6: (8.832,17.627,9.048)
C5: (8.995,17.179,7.796)
O3': (10.845,20.123,12.799)
C2: (5.579,16.061,9.782)
OP1: (5.898,20.166,3.536)
OP2: (7.459,18.286,4.288)
C4: (6.541,14.559,8.278)
O5': (5.932,19.376,5.884)
C3': (5.714,19.971,8.569)
C1': (4.379,18.081,9.020)
O4': (3.946,18.653,7.796)
C5': (4.862,20.228,6.238)
P: (6.149,18.965,4.371)
O2: (5.294,16.403,10.944)
C4': (4.500,19.987,7.664)
C2': (5.211,19.146,9.739)
O2': (4.390,19.925,10.581)
N1: (5.148,16.857,8.718)
N3: (6.286,14.924,9.529)
N4: (7.187,13.390,8.096)
C6: (5.435,16.496,7.425)
C5: (6.127,15.362,7.156)
O3': (6.031,21.297,8.951)
OP1: (5.898,20.166,3.536)
OP2: (7.459,18.286,4.288)
C4: (6.541,14.559,8.278)
O5': (5.932,19.376,5.884)
C3': (5.714,19.971,8.569)
C1': (4.379,18.081,9.020)
O4': (3.946,18.653,7.796)
C5': (4.862,20.228,6.238)
P: (6.149,18.965,4.371)
O2: (5.294,16.403,10.944)
C4': (4.500,19.987,7.664)
C2': (5.211,19.146,9.739)
O2': (4.390,19.925,10.581)
N1: (5.148,16.857,8.718)
N3: (6.286,14.924,9.529)
N4: (7.187,13.390,8.096)
C6: (5.435,16.496,7.425)
C5: (6.127,15.362,7.156)
O3': (6.031,21.297,8.951)
Image (generated by PyMOL):