Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBZ:B63:B21
Extra
PDB:
ATOM 1 O3' G A 62 32.647 77.699 69.995 1.00 62.66 O
ATOM 2 P U A 63 31.058 77.911 70.233 1.00 63.16 P
ATOM 3 OP1 U A 63 30.659 77.802 71.647 1.00 61.62 O
ATOM 4 OP2 U A 63 30.323 77.110 69.220 1.00 65.19 O
ATOM 5 O5' U A 63 30.893 79.447 69.852 1.00 65.24 O
ATOM 6 C5' U A 63 31.147 80.461 70.820 1.00 66.32 C
ATOM 7 C4' U A 63 32.333 81.300 70.418 1.00 67.30 C
ATOM 8 O4' U A 63 32.691 82.098 71.561 1.00 68.45 O
ATOM 9 C3' U A 63 33.583 80.501 70.088 1.00 68.13 C
ATOM 10 O3' U A 63 33.613 80.229 68.677 1.00 70.61 O
ATOM 11 C2' U A 63 34.758 81.293 70.681 1.00 66.85 C
ATOM 12 O2' U A 63 35.701 81.835 69.791 1.00 65.94 O
ATOM 13 C1' U A 63 34.070 82.361 71.533 1.00 68.47 C
ATOM 14 N1 U A 63 34.536 82.435 72.920 1.00 70.21 N
ATOM 15 C2 U A 63 35.236 83.564 73.288 1.00 71.96 C
ATOM 16 O2 U A 63 35.468 84.475 72.512 1.00 73.61 O
ATOM 17 N3 U A 63 35.649 83.592 74.596 1.00 71.90 N
ATOM 18 C4 U A 63 35.429 82.628 75.551 1.00 72.22 C
ATOM 19 O4 U A 63 35.866 82.799 76.692 1.00 72.66 O
ATOM 20 C5 U A 63 34.690 81.486 75.089 1.00 72.59 C
ATOM 21 C6 U A 63 34.282 81.432 73.817 1.00 71.33 C
ATOM 22 P G A 64 34.210 81.315 67.644 1.00 71.03 P
ATOM 23 OP1 G A 64 35.508 80.864 67.077 1.00 69.65 O
ATOM 24 OP2 G A 64 34.122 82.634 68.317 1.00 73.22 O
ATOM 25 O5' G A 64 33.139 81.352 66.472 1.00 70.30 O
TER
ATOM 1 O3' U B 20 33.399 78.930 76.004 1.00 65.20 O
ATOM 2 P C B 21 33.629 77.695 75.007 1.00 64.54 P
ATOM 3 OP1 C B 21 34.154 78.231 73.715 1.00 62.76 O
ATOM 4 OP2 C B 21 32.389 76.876 75.023 1.00 60.98 O
ATOM 5 O5' C B 21 34.784 76.848 75.695 1.00 63.41 O
ATOM 6 C5' C B 21 34.526 76.048 76.833 1.00 63.19 C
ATOM 7 C4' C B 21 35.819 75.473 77.340 1.00 64.06 C
ATOM 8 O4' C B 21 36.365 74.585 76.338 1.00 63.80 O
ATOM 9 C3' C B 21 36.915 76.494 77.587 1.00 65.28 C
ATOM 10 O3' C B 21 36.789 77.029 78.896 1.00 69.15 O
ATOM 11 C2' C B 21 38.188 75.675 77.421 1.00 63.96 C
ATOM 12 O2' C B 21 38.524 74.971 78.593 1.00 65.88 O
ATOM 13 C1' C B 21 37.774 74.658 76.360 1.00 62.67 C
ATOM 14 N1 C B 21 38.245 74.962 75.007 1.00 60.36 N
ATOM 15 C2 C B 21 39.575 74.725 74.716 1.00 59.56 C
ATOM 16 O2 C B 21 40.308 74.309 75.615 1.00 60.81 O
ATOM 17 N3 C B 21 40.032 74.958 73.470 1.00 58.46 N
ATOM 18 C4 C B 21 39.210 75.428 72.536 1.00 58.41 C
ATOM 19 N4 C B 21 39.709 75.643 71.318 1.00 58.54 N
ATOM 20 C5 C B 21 37.839 75.698 72.808 1.00 58.05 C
ATOM 21 C6 C B 21 37.402 75.451 74.049 1.00 59.56 C
ATOM 22 P C B 22 37.176 78.562 79.167 1.00 70.86 P
ATOM 23 OP1 C B 22 36.688 78.923 80.523 1.00 71.67 O
ATOM 24 OP2 C B 22 36.743 79.363 77.996 1.00 70.61 O
ATOM 25 O5' C B 22 38.765 78.536 79.203 1.00 72.73 O
TER
ATOM 2 P U A 63 31.058 77.911 70.233 1.00 63.16 P
ATOM 3 OP1 U A 63 30.659 77.802 71.647 1.00 61.62 O
ATOM 4 OP2 U A 63 30.323 77.110 69.220 1.00 65.19 O
ATOM 5 O5' U A 63 30.893 79.447 69.852 1.00 65.24 O
ATOM 6 C5' U A 63 31.147 80.461 70.820 1.00 66.32 C
ATOM 7 C4' U A 63 32.333 81.300 70.418 1.00 67.30 C
ATOM 8 O4' U A 63 32.691 82.098 71.561 1.00 68.45 O
ATOM 9 C3' U A 63 33.583 80.501 70.088 1.00 68.13 C
ATOM 10 O3' U A 63 33.613 80.229 68.677 1.00 70.61 O
ATOM 11 C2' U A 63 34.758 81.293 70.681 1.00 66.85 C
ATOM 12 O2' U A 63 35.701 81.835 69.791 1.00 65.94 O
ATOM 13 C1' U A 63 34.070 82.361 71.533 1.00 68.47 C
ATOM 14 N1 U A 63 34.536 82.435 72.920 1.00 70.21 N
ATOM 15 C2 U A 63 35.236 83.564 73.288 1.00 71.96 C
ATOM 16 O2 U A 63 35.468 84.475 72.512 1.00 73.61 O
ATOM 17 N3 U A 63 35.649 83.592 74.596 1.00 71.90 N
ATOM 18 C4 U A 63 35.429 82.628 75.551 1.00 72.22 C
ATOM 19 O4 U A 63 35.866 82.799 76.692 1.00 72.66 O
ATOM 20 C5 U A 63 34.690 81.486 75.089 1.00 72.59 C
ATOM 21 C6 U A 63 34.282 81.432 73.817 1.00 71.33 C
ATOM 22 P G A 64 34.210 81.315 67.644 1.00 71.03 P
ATOM 23 OP1 G A 64 35.508 80.864 67.077 1.00 69.65 O
ATOM 24 OP2 G A 64 34.122 82.634 68.317 1.00 73.22 O
ATOM 25 O5' G A 64 33.139 81.352 66.472 1.00 70.30 O
TER
ATOM 1 O3' U B 20 33.399 78.930 76.004 1.00 65.20 O
ATOM 2 P C B 21 33.629 77.695 75.007 1.00 64.54 P
ATOM 3 OP1 C B 21 34.154 78.231 73.715 1.00 62.76 O
ATOM 4 OP2 C B 21 32.389 76.876 75.023 1.00 60.98 O
ATOM 5 O5' C B 21 34.784 76.848 75.695 1.00 63.41 O
ATOM 6 C5' C B 21 34.526 76.048 76.833 1.00 63.19 C
ATOM 7 C4' C B 21 35.819 75.473 77.340 1.00 64.06 C
ATOM 8 O4' C B 21 36.365 74.585 76.338 1.00 63.80 O
ATOM 9 C3' C B 21 36.915 76.494 77.587 1.00 65.28 C
ATOM 10 O3' C B 21 36.789 77.029 78.896 1.00 69.15 O
ATOM 11 C2' C B 21 38.188 75.675 77.421 1.00 63.96 C
ATOM 12 O2' C B 21 38.524 74.971 78.593 1.00 65.88 O
ATOM 13 C1' C B 21 37.774 74.658 76.360 1.00 62.67 C
ATOM 14 N1 C B 21 38.245 74.962 75.007 1.00 60.36 N
ATOM 15 C2 C B 21 39.575 74.725 74.716 1.00 59.56 C
ATOM 16 O2 C B 21 40.308 74.309 75.615 1.00 60.81 O
ATOM 17 N3 C B 21 40.032 74.958 73.470 1.00 58.46 N
ATOM 18 C4 C B 21 39.210 75.428 72.536 1.00 58.41 C
ATOM 19 N4 C B 21 39.709 75.643 71.318 1.00 58.54 N
ATOM 20 C5 C B 21 37.839 75.698 72.808 1.00 58.05 C
ATOM 21 C6 C B 21 37.402 75.451 74.049 1.00 59.56 C
ATOM 22 P C B 22 37.176 78.562 79.167 1.00 70.86 P
ATOM 23 OP1 C B 22 36.688 78.923 80.523 1.00 71.67 O
ATOM 24 OP2 C B 22 36.743 79.363 77.996 1.00 70.61 O
ATOM 25 O5' C B 22 38.765 78.536 79.203 1.00 72.73 O
TER
Atoms:
C4: (35.429,82.628,75.551)
N3: (35.649,83.592,74.596)
OP1: (30.659,77.802,71.647)
OP2: (30.323,77.110,69.220)
C2: (35.236,83.564,73.288)
C1': (34.070,82.361,71.533)
C3': (33.583,80.501,70.088)
O5': (30.893,79.447,69.852)
O4': (32.691,82.098,71.561)
C5': (31.147,80.461,70.820)
P: (31.058,77.911,70.233)
C4': (32.333,81.300,70.418)
C2': (34.758,81.293,70.681)
O2': (35.701,81.835,69.791)
N1: (34.536,82.435,72.920)
O4: (35.866,82.799,76.692)
O2: (35.468,84.475,72.512)
C6: (34.282,81.432,73.817)
C5: (34.690,81.486,75.089)
O3': (33.613,80.229,68.677)
N3: (35.649,83.592,74.596)
OP1: (30.659,77.802,71.647)
OP2: (30.323,77.110,69.220)
C2: (35.236,83.564,73.288)
C1': (34.070,82.361,71.533)
C3': (33.583,80.501,70.088)
O5': (30.893,79.447,69.852)
O4': (32.691,82.098,71.561)
C5': (31.147,80.461,70.820)
P: (31.058,77.911,70.233)
C4': (32.333,81.300,70.418)
C2': (34.758,81.293,70.681)
O2': (35.701,81.835,69.791)
N1: (34.536,82.435,72.920)
O4: (35.866,82.799,76.692)
O2: (35.468,84.475,72.512)
C6: (34.282,81.432,73.817)
C5: (34.690,81.486,75.089)
O3': (33.613,80.229,68.677)
C2: (39.575,74.725,74.716)
OP1: (34.154,78.231,73.715)
OP2: (32.389,76.876,75.023)
C4: (39.210,75.428,72.536)
O5': (34.784,76.848,75.695)
C3': (36.915,76.494,77.587)
C1': (37.774,74.658,76.360)
O4': (36.365,74.585,76.338)
C5': (34.526,76.048,76.833)
P: (33.629,77.695,75.007)
O2: (40.308,74.309,75.615)
C4': (35.819,75.473,77.340)
C2': (38.188,75.675,77.421)
O2': (38.524,74.971,78.593)
N1: (38.245,74.962,75.007)
N3: (40.032,74.958,73.470)
N4: (39.709,75.643,71.318)
C6: (37.402,75.451,74.049)
C5: (37.839,75.698,72.808)
O3': (36.789,77.029,78.896)
OP1: (34.154,78.231,73.715)
OP2: (32.389,76.876,75.023)
C4: (39.210,75.428,72.536)
O5': (34.784,76.848,75.695)
C3': (36.915,76.494,77.587)
C1': (37.774,74.658,76.360)
O4': (36.365,74.585,76.338)
C5': (34.526,76.048,76.833)
P: (33.629,77.695,75.007)
O2: (40.308,74.309,75.615)
C4': (35.819,75.473,77.340)
C2': (38.188,75.675,77.421)
O2': (38.524,74.971,78.593)
N1: (38.245,74.962,75.007)
N3: (40.032,74.958,73.470)
N4: (39.709,75.643,71.318)
C6: (37.402,75.451,74.049)
C5: (37.839,75.698,72.808)
O3': (36.789,77.029,78.896)
Image (generated by PyMOL):