Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 79.610 104.839 0.193 1.00 66.16 O
ATOM 2 P U A 258 78.106 104.790 0.755 1.00 67.77 P
ATOM 3 OP1 U A 258 77.454 103.593 0.165 1.00 67.85 O
ATOM 4 OP2 U A 258 77.482 106.128 0.570 1.00 66.71 O
ATOM 5 O5' U A 258 78.320 104.533 2.311 1.00 68.33 O
ATOM 6 C5' U A 258 79.052 103.380 2.761 1.00 68.24 C
ATOM 7 C4' U A 258 79.314 103.472 4.243 1.00 68.04 C
ATOM 8 O4' U A 258 80.384 104.425 4.515 1.00 65.85 O
ATOM 9 C3' U A 258 78.122 103.922 5.085 1.00 68.89 C
ATOM 10 O3' U A 258 78.174 103.263 6.340 1.00 71.51 O
ATOM 11 C2' U A 258 78.409 105.404 5.291 1.00 66.64 C
ATOM 12 O2' U A 258 77.765 105.927 6.440 1.00 69.24 O
ATOM 13 C1' U A 258 79.926 105.360 5.465 1.00 62.72 C
ATOM 14 N1 U A 258 80.706 106.607 5.371 1.00 56.67 N
ATOM 15 C2 U A 258 82.022 106.557 5.808 1.00 53.35 C
ATOM 16 O2 U A 258 82.571 105.524 6.157 1.00 52.26 O
ATOM 17 N3 U A 258 82.676 107.759 5.822 1.00 50.73 N
ATOM 18 C4 U A 258 82.177 108.980 5.436 1.00 51.21 C
ATOM 19 O4 U A 258 82.889 109.975 5.535 1.00 49.80 O
ATOM 20 C5 U A 258 80.830 108.950 4.945 1.00 51.90 C
ATOM 21 C6 U A 258 80.161 107.792 4.921 1.00 54.09 C
ATOM 22 P C A 259 76.828 102.703 6.997 1.00 73.90 P
ATOM 23 OP1 C A 259 75.724 103.666 6.768 1.00 73.30 O
ATOM 24 OP2 C A 259 77.189 102.305 8.382 1.00 76.01 O
ATOM 25 O5' C A 259 76.502 101.389 6.164 1.00 76.75 O
TER
ATOM 1 O3' C B 227 77.459 113.430 4.830 1.00 60.56 O
ATOM 2 P C B 228 78.896 113.058 4.204 1.00 60.63 P
ATOM 3 OP1 C B 228 79.003 113.820 2.934 1.00 61.01 O
ATOM 4 OP2 C B 228 79.100 111.589 4.199 1.00 59.38 O
ATOM 5 O5' C B 228 79.929 113.662 5.254 1.00 59.61 O
ATOM 6 C5' C B 228 81.289 113.218 5.292 1.00 56.91 C
ATOM 7 C4' C B 228 81.861 113.443 6.665 1.00 56.52 C
ATOM 8 O4' C B 228 81.144 112.635 7.633 1.00 54.39 O
ATOM 9 C3' C B 228 83.316 113.043 6.827 1.00 57.21 C
ATOM 10 O3' C B 228 84.140 114.134 6.408 1.00 58.85 O
ATOM 11 C2' C B 228 83.422 112.800 8.332 1.00 55.96 C
ATOM 12 O2' C B 228 83.591 113.995 9.074 1.00 56.93 O
ATOM 13 C1' C B 228 82.035 112.225 8.661 1.00 54.10 C
ATOM 14 N1 C B 228 81.931 110.755 8.836 1.00 51.37 N
ATOM 15 C2 C B 228 82.915 110.063 9.592 1.00 52.08 C
ATOM 16 O2 C B 228 83.825 110.701 10.145 1.00 51.11 O
ATOM 17 N3 C B 228 82.832 108.717 9.703 1.00 51.80 N
ATOM 18 C4 C B 228 81.823 108.059 9.123 1.00 51.75 C
ATOM 19 N4 C B 228 81.800 106.731 9.233 1.00 51.18 N
ATOM 20 C5 C B 228 80.796 108.734 8.394 1.00 50.73 C
ATOM 21 C6 C B 228 80.892 110.064 8.273 1.00 50.50 C
ATOM 22 P A B 229 85.485 113.868 5.565 1.00 61.53 P
ATOM 23 OP1 A B 229 86.149 115.202 5.458 1.00 59.34 O
ATOM 24 OP2 A B 229 85.132 113.121 4.325 1.00 60.49 O
ATOM 25 O5' A B 229 86.374 112.919 6.486 1.00 56.63 O
TER
ATOM 2 P U A 258 78.106 104.790 0.755 1.00 67.77 P
ATOM 3 OP1 U A 258 77.454 103.593 0.165 1.00 67.85 O
ATOM 4 OP2 U A 258 77.482 106.128 0.570 1.00 66.71 O
ATOM 5 O5' U A 258 78.320 104.533 2.311 1.00 68.33 O
ATOM 6 C5' U A 258 79.052 103.380 2.761 1.00 68.24 C
ATOM 7 C4' U A 258 79.314 103.472 4.243 1.00 68.04 C
ATOM 8 O4' U A 258 80.384 104.425 4.515 1.00 65.85 O
ATOM 9 C3' U A 258 78.122 103.922 5.085 1.00 68.89 C
ATOM 10 O3' U A 258 78.174 103.263 6.340 1.00 71.51 O
ATOM 11 C2' U A 258 78.409 105.404 5.291 1.00 66.64 C
ATOM 12 O2' U A 258 77.765 105.927 6.440 1.00 69.24 O
ATOM 13 C1' U A 258 79.926 105.360 5.465 1.00 62.72 C
ATOM 14 N1 U A 258 80.706 106.607 5.371 1.00 56.67 N
ATOM 15 C2 U A 258 82.022 106.557 5.808 1.00 53.35 C
ATOM 16 O2 U A 258 82.571 105.524 6.157 1.00 52.26 O
ATOM 17 N3 U A 258 82.676 107.759 5.822 1.00 50.73 N
ATOM 18 C4 U A 258 82.177 108.980 5.436 1.00 51.21 C
ATOM 19 O4 U A 258 82.889 109.975 5.535 1.00 49.80 O
ATOM 20 C5 U A 258 80.830 108.950 4.945 1.00 51.90 C
ATOM 21 C6 U A 258 80.161 107.792 4.921 1.00 54.09 C
ATOM 22 P C A 259 76.828 102.703 6.997 1.00 73.90 P
ATOM 23 OP1 C A 259 75.724 103.666 6.768 1.00 73.30 O
ATOM 24 OP2 C A 259 77.189 102.305 8.382 1.00 76.01 O
ATOM 25 O5' C A 259 76.502 101.389 6.164 1.00 76.75 O
TER
ATOM 1 O3' C B 227 77.459 113.430 4.830 1.00 60.56 O
ATOM 2 P C B 228 78.896 113.058 4.204 1.00 60.63 P
ATOM 3 OP1 C B 228 79.003 113.820 2.934 1.00 61.01 O
ATOM 4 OP2 C B 228 79.100 111.589 4.199 1.00 59.38 O
ATOM 5 O5' C B 228 79.929 113.662 5.254 1.00 59.61 O
ATOM 6 C5' C B 228 81.289 113.218 5.292 1.00 56.91 C
ATOM 7 C4' C B 228 81.861 113.443 6.665 1.00 56.52 C
ATOM 8 O4' C B 228 81.144 112.635 7.633 1.00 54.39 O
ATOM 9 C3' C B 228 83.316 113.043 6.827 1.00 57.21 C
ATOM 10 O3' C B 228 84.140 114.134 6.408 1.00 58.85 O
ATOM 11 C2' C B 228 83.422 112.800 8.332 1.00 55.96 C
ATOM 12 O2' C B 228 83.591 113.995 9.074 1.00 56.93 O
ATOM 13 C1' C B 228 82.035 112.225 8.661 1.00 54.10 C
ATOM 14 N1 C B 228 81.931 110.755 8.836 1.00 51.37 N
ATOM 15 C2 C B 228 82.915 110.063 9.592 1.00 52.08 C
ATOM 16 O2 C B 228 83.825 110.701 10.145 1.00 51.11 O
ATOM 17 N3 C B 228 82.832 108.717 9.703 1.00 51.80 N
ATOM 18 C4 C B 228 81.823 108.059 9.123 1.00 51.75 C
ATOM 19 N4 C B 228 81.800 106.731 9.233 1.00 51.18 N
ATOM 20 C5 C B 228 80.796 108.734 8.394 1.00 50.73 C
ATOM 21 C6 C B 228 80.892 110.064 8.273 1.00 50.50 C
ATOM 22 P A B 229 85.485 113.868 5.565 1.00 61.53 P
ATOM 23 OP1 A B 229 86.149 115.202 5.458 1.00 59.34 O
ATOM 24 OP2 A B 229 85.132 113.121 4.325 1.00 60.49 O
ATOM 25 O5' A B 229 86.374 112.919 6.486 1.00 56.63 O
TER
Atoms:
C4: (82.177,108.980,5.436)
N3: (82.676,107.759,5.822)
OP1: (77.454,103.593,0.165)
OP2: (77.482,106.128,0.570)
C2: (82.022,106.557,5.808)
C1': (79.926,105.360,5.465)
C3': (78.122,103.922,5.085)
O5': (78.320,104.533,2.311)
O4': (80.384,104.425,4.515)
C5': (79.052,103.380,2.761)
P: (78.106,104.790,0.755)
C4': (79.314,103.472,4.243)
C2': (78.409,105.404,5.291)
O2': (77.765,105.927,6.440)
N1: (80.706,106.607,5.371)
O4: (82.889,109.975,5.535)
O2: (82.571,105.524,6.157)
C6: (80.161,107.792,4.921)
C5: (80.830,108.950,4.945)
O3': (78.174,103.263,6.340)
N3: (82.676,107.759,5.822)
OP1: (77.454,103.593,0.165)
OP2: (77.482,106.128,0.570)
C2: (82.022,106.557,5.808)
C1': (79.926,105.360,5.465)
C3': (78.122,103.922,5.085)
O5': (78.320,104.533,2.311)
O4': (80.384,104.425,4.515)
C5': (79.052,103.380,2.761)
P: (78.106,104.790,0.755)
C4': (79.314,103.472,4.243)
C2': (78.409,105.404,5.291)
O2': (77.765,105.927,6.440)
N1: (80.706,106.607,5.371)
O4: (82.889,109.975,5.535)
O2: (82.571,105.524,6.157)
C6: (80.161,107.792,4.921)
C5: (80.830,108.950,4.945)
O3': (78.174,103.263,6.340)
C2: (82.915,110.063,9.592)
OP1: (79.003,113.820,2.934)
OP2: (79.100,111.589,4.199)
C4: (81.823,108.059,9.123)
O5': (79.929,113.662,5.254)
C3': (83.316,113.043,6.827)
C1': (82.035,112.225,8.661)
O4': (81.144,112.635,7.633)
C5': (81.289,113.218,5.292)
P: (78.896,113.058,4.204)
O2: (83.825,110.701,10.145)
C4': (81.861,113.443,6.665)
C2': (83.422,112.800,8.332)
O2': (83.591,113.995,9.074)
N1: (81.931,110.755,8.836)
N3: (82.832,108.717,9.703)
N4: (81.800,106.731,9.233)
C6: (80.892,110.064,8.273)
C5: (80.796,108.734,8.394)
O3': (84.140,114.134,6.408)
OP1: (79.003,113.820,2.934)
OP2: (79.100,111.589,4.199)
C4: (81.823,108.059,9.123)
O5': (79.929,113.662,5.254)
C3': (83.316,113.043,6.827)
C1': (82.035,112.225,8.661)
O4': (81.144,112.635,7.633)
C5': (81.289,113.218,5.292)
P: (78.896,113.058,4.204)
O2: (83.825,110.701,10.145)
C4': (81.861,113.443,6.665)
C2': (83.422,112.800,8.332)
O2': (83.591,113.995,9.074)
N1: (81.931,110.755,8.836)
N3: (82.832,108.717,9.703)
N4: (81.800,106.731,9.233)
C6: (80.892,110.064,8.273)
C5: (80.796,108.734,8.394)
O3': (84.140,114.134,6.408)
Image (generated by PyMOL):