ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8S:A1811:A1812

Extra

PDB:
ATOM 1 O3' G A1810 -45.954 -6.041 32.449 1.00 0.01 O
ATOM 2 P U A1811 -46.149 -4.487 32.779 1.00 0.01 P
ATOM 3 OP1 U A1811 -46.141 -3.768 31.479 1.00 0.01 O
ATOM 4 OP2 U A1811 -45.153 -4.132 33.790 1.00 0.01 O
ATOM 5 O5' U A1811 -47.584 -4.427 33.427 1.00 0.01 O
ATOM 6 C5' U A1811 -48.732 -4.673 32.654 1.00 0.01 C
ATOM 7 C4' U A1811 -49.976 -4.274 33.386 1.00 0.01 C
ATOM 8 O4' U A1811 -50.073 -5.015 34.630 1.00 0.01 O
ATOM 9 C3' U A1811 -50.053 -2.800 33.769 1.00 0.01 C
ATOM 10 O3' U A1811 -51.360 -2.322 33.553 1.00 0.01 O
ATOM 11 C2' U A1811 -49.783 -2.794 35.256 1.00 0.01 C
ATOM 12 O2' U A1811 -50.375 -1.716 35.935 1.00 0.01 O
ATOM 13 C1' U A1811 -50.390 -4.121 35.669 1.00 0.01 C
ATOM 14 N1 U A1811 -49.860 -4.653 36.925 1.00 0.01 N
ATOM 15 C2 U A1811 -50.763 -4.768 37.914 1.00 0.01 C
ATOM 16 O2 U A1811 -51.912 -4.473 37.759 1.00 0.01 O
ATOM 17 N3 U A1811 -50.307 -5.250 39.072 1.00 0.01 N
ATOM 18 C4 U A1811 -49.032 -5.594 39.344 1.00 0.01 C
ATOM 19 O4 U A1811 -48.783 -6.008 40.471 1.00 0.01 O
ATOM 20 C5 U A1811 -48.116 -5.431 38.273 1.00 0.01 C
ATOM 21 C6 U A1811 -48.565 -4.977 37.117 1.00 0.01 C
ATOM 22 P A A1812 -51.575 -0.801 33.186 1.00 0.01 P
ATOM 23 OP1 A A1812 -50.354 -0.336 32.502 1.00 0.01 O
ATOM 24 OP2 A A1812 -52.006 -0.129 34.415 1.00 0.01 O
ATOM 25 O5' A A1812 -52.756 -0.878 32.158 1.00 0.01 O
TER

ATOM 1 O3' U B1811 -51.360 -2.322 33.553 1.00 0.01 O
ATOM 2 P A B1812 -51.575 -0.801 33.186 1.00 0.01 P
ATOM 3 OP1 A B1812 -50.354 -0.336 32.502 1.00 0.01 O
ATOM 4 OP2 A B1812 -52.006 -0.129 34.415 1.00 0.01 O
ATOM 5 O5' A B1812 -52.756 -0.878 32.158 1.00 0.01 O
ATOM 6 C5' A B1812 -52.484 -1.046 30.785 1.00 0.01 C
ATOM 7 C4' A B1812 -53.721 -1.402 30.047 1.00 0.01 C
ATOM 8 O4' A B1812 -54.399 -2.429 30.801 1.00 0.01 O
ATOM 9 C3' A B1812 -54.711 -0.259 29.881 1.00 0.01 C
ATOM 10 O3' A B1812 -55.279 -0.283 28.573 1.00 0.01 O
ATOM 11 C2' A B1812 -55.777 -0.546 30.946 1.00 0.01 C
ATOM 12 O2' A B1812 -57.070 -0.091 30.619 1.00 0.01 O
ATOM 13 C1' A B1812 -55.733 -2.058 31.045 1.00 0.01 C
ATOM 14 N9 A B1812 -56.124 -2.586 32.354 1.00 0.01 N
ATOM 15 C8 A B1812 -55.345 -3.007 33.380 1.00 0.01 C
ATOM 16 N7 A B1812 -56.026 -3.428 34.419 1.00 0.01 N
ATOM 17 C5 A B1812 -57.345 -3.286 34.066 1.00 0.01 C
ATOM 18 C6 A B1812 -58.568 -3.560 34.726 1.00 0.01 C
ATOM 19 N6 A B1812 -58.764 -4.056 35.957 1.00 0.01 N
ATOM 20 N1 A B1812 -59.681 -3.291 34.062 1.00 0.01 N
ATOM 21 C2 A B1812 -59.558 -2.787 32.836 1.00 0.01 C
ATOM 22 N3 A B1812 -58.489 -2.494 32.115 1.00 0.01 N
ATOM 23 C4 A B1812 -57.396 -2.779 32.794 1.00 0.01 C
ATOM 24 P U B1813 -54.583 0.544 27.381 1.00 0.01 P
ATOM 25 OP1 U B1813 -54.135 1.821 27.936 1.00 0.01 O
ATOM 26 OP2 U B1813 -55.514 0.550 26.266 1.00 0.01 O
ATOM 27 O5' U B1813 -53.337 -0.339 27.000 1.00 0.01 O
TER

Atoms:
C4: (-49.032,-5.594,39.344)
N3: (-50.307,-5.250,39.072)
OP1: (-46.141,-3.768,31.479)
OP2: (-45.153,-4.132,33.790)
C2: (-50.763,-4.768,37.914)
C1': (-50.390,-4.121,35.669)
C3': (-50.053,-2.800,33.769)
O5': (-47.584,-4.427,33.427)
O4': (-50.073,-5.015,34.630)
C5': (-48.732,-4.673,32.654)
P: (-46.149,-4.487,32.779)
C4': (-49.976,-4.274,33.386)
C2': (-49.783,-2.794,35.256)
O2': (-50.375,-1.716,35.935)
N1: (-49.860,-4.653,36.925)
O4: (-48.783,-6.008,40.471)
O2: (-51.912,-4.473,37.759)
C6: (-48.565,-4.977,37.117)
C5: (-48.116,-5.431,38.273)
O3': (-51.360,-2.322,33.553)
OP1: (-50.354,-0.336,32.502)
OP2: (-52.006,-0.129,34.415)
C3': (-54.711,-0.259,29.881)
C1': (-55.733,-2.058,31.045)
C5': (-52.484,-1.046,30.785)
O4': (-54.399,-2.429,30.801)
C8: (-55.345,-3.007,33.380)
O2': (-57.070,-0.091,30.619)
C6: (-58.568,-3.560,34.726)
C5: (-57.345,-3.286,34.066)
C4: (-57.396,-2.779,32.794)
P: (-51.575,-0.801,33.186)
C4': (-53.721,-1.402,30.047)
C2': (-55.777,-0.546,30.946)
C2: (-59.558,-2.787,32.836)
N1: (-59.681,-3.291,34.062)
N3: (-58.489,-2.494,32.115)
N6: (-58.764,-4.056,35.957)
N7: (-56.026,-3.428,34.419)
N9: (-56.124,-2.586,32.354)
O5': (-52.756,-0.878,32.158)
O3': (-55.279,-0.283,28.573)
Image (generated by PyMOL):
PyMOL image
show in jmol