Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01087:01086
Extra
PDB:
ATOM 1 O3' C A1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 2 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 3 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 4 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 5 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
ATOM 6 C5' U A1087 47.577 103.665 116.581 1.00 49.79 C
ATOM 7 C4' U A1087 46.486 104.686 116.388 1.00 52.24 C
ATOM 8 O4' U A1087 46.199 104.825 114.966 1.00 53.61 O
ATOM 9 C3' U A1087 45.152 104.354 117.054 1.00 53.33 C
ATOM 10 O3' U A1087 44.541 105.552 117.491 1.00 54.30 O
ATOM 11 C2' U A1087 44.340 103.781 115.900 1.00 53.74 C
ATOM 12 O2' U A1087 42.946 103.888 116.082 1.00 55.06 O
ATOM 13 C1' U A1087 44.811 104.674 114.760 1.00 52.79 C
ATOM 14 N1 U A1087 44.568 104.175 113.398 1.00 52.12 N
ATOM 15 C2 U A1087 44.027 105.070 112.483 1.00 51.63 C
ATOM 16 O2 U A1087 43.761 106.228 112.757 1.00 50.61 O
ATOM 17 N3 U A1087 43.807 104.558 111.233 1.00 51.85 N
ATOM 18 C4 U A1087 44.057 103.277 110.806 1.00 52.55 C
ATOM 19 O4 U A1087 43.796 102.976 109.643 1.00 54.71 O
ATOM 20 C5 U A1087 44.615 102.408 111.802 1.00 52.13 C
ATOM 21 C6 U A1087 44.851 102.877 113.032 1.00 52.27 C
ATOM 22 P C A1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 23 OP1 C A1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 24 OP2 C A1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 25 O5' C A1088 43.548 104.755 119.654 1.00 55.35 O
TER
ATOM 1 O3' C B1085 45.251 99.038 111.962 1.00 53.92 O
ATOM 2 P C B1086 46.711 99.063 111.286 1.00 53.10 P
ATOM 3 OP1 C B1086 46.597 99.832 110.026 1.00 54.71 O
ATOM 4 OP2 C B1086 47.276 97.685 111.255 1.00 51.17 O
ATOM 5 O5' C B1086 47.561 99.944 112.301 1.00 53.58 O
ATOM 6 C5' C B1086 48.915 99.607 112.630 1.00 50.24 C
ATOM 7 C4' C B1086 49.670 100.856 112.973 1.00 49.58 C
ATOM 8 O4' C B1086 49.800 101.663 111.777 1.00 49.23 O
ATOM 9 C3' C B1086 48.971 101.764 113.974 1.00 50.02 C
ATOM 10 O3' C B1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 11 C2' C B1086 49.573 103.127 113.650 1.00 50.64 C
ATOM 12 O2' C B1086 50.835 103.333 114.259 1.00 50.28 O
ATOM 13 C1' C B1086 49.743 103.038 112.126 1.00 49.91 C
ATOM 14 N1 C B1086 48.685 103.692 111.324 1.00 49.66 N
ATOM 15 C2 C B1086 48.426 105.064 111.514 1.00 50.82 C
ATOM 16 O2 C B1086 49.092 105.698 112.353 1.00 52.87 O
ATOM 17 N3 C B1086 47.465 105.663 110.770 1.00 48.50 N
ATOM 18 C4 C B1086 46.792 104.958 109.858 1.00 46.98 C
ATOM 19 N4 C B1086 45.876 105.595 109.127 1.00 46.57 N
ATOM 20 C5 C B1086 47.032 103.572 109.649 1.00 46.47 C
ATOM 21 C6 C B1086 47.971 102.983 110.398 1.00 47.76 C
ATOM 22 P U B1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 23 OP1 U B1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 24 OP2 U B1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 25 O5' U B1087 47.104 102.362 116.222 1.00 49.70 O
TER
ATOM 2 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 3 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 4 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 5 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
ATOM 6 C5' U A1087 47.577 103.665 116.581 1.00 49.79 C
ATOM 7 C4' U A1087 46.486 104.686 116.388 1.00 52.24 C
ATOM 8 O4' U A1087 46.199 104.825 114.966 1.00 53.61 O
ATOM 9 C3' U A1087 45.152 104.354 117.054 1.00 53.33 C
ATOM 10 O3' U A1087 44.541 105.552 117.491 1.00 54.30 O
ATOM 11 C2' U A1087 44.340 103.781 115.900 1.00 53.74 C
ATOM 12 O2' U A1087 42.946 103.888 116.082 1.00 55.06 O
ATOM 13 C1' U A1087 44.811 104.674 114.760 1.00 52.79 C
ATOM 14 N1 U A1087 44.568 104.175 113.398 1.00 52.12 N
ATOM 15 C2 U A1087 44.027 105.070 112.483 1.00 51.63 C
ATOM 16 O2 U A1087 43.761 106.228 112.757 1.00 50.61 O
ATOM 17 N3 U A1087 43.807 104.558 111.233 1.00 51.85 N
ATOM 18 C4 U A1087 44.057 103.277 110.806 1.00 52.55 C
ATOM 19 O4 U A1087 43.796 102.976 109.643 1.00 54.71 O
ATOM 20 C5 U A1087 44.615 102.408 111.802 1.00 52.13 C
ATOM 21 C6 U A1087 44.851 102.877 113.032 1.00 52.27 C
ATOM 22 P C A1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 23 OP1 C A1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 24 OP2 C A1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 25 O5' C A1088 43.548 104.755 119.654 1.00 55.35 O
TER
ATOM 1 O3' C B1085 45.251 99.038 111.962 1.00 53.92 O
ATOM 2 P C B1086 46.711 99.063 111.286 1.00 53.10 P
ATOM 3 OP1 C B1086 46.597 99.832 110.026 1.00 54.71 O
ATOM 4 OP2 C B1086 47.276 97.685 111.255 1.00 51.17 O
ATOM 5 O5' C B1086 47.561 99.944 112.301 1.00 53.58 O
ATOM 6 C5' C B1086 48.915 99.607 112.630 1.00 50.24 C
ATOM 7 C4' C B1086 49.670 100.856 112.973 1.00 49.58 C
ATOM 8 O4' C B1086 49.800 101.663 111.777 1.00 49.23 O
ATOM 9 C3' C B1086 48.971 101.764 113.974 1.00 50.02 C
ATOM 10 O3' C B1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 11 C2' C B1086 49.573 103.127 113.650 1.00 50.64 C
ATOM 12 O2' C B1086 50.835 103.333 114.259 1.00 50.28 O
ATOM 13 C1' C B1086 49.743 103.038 112.126 1.00 49.91 C
ATOM 14 N1 C B1086 48.685 103.692 111.324 1.00 49.66 N
ATOM 15 C2 C B1086 48.426 105.064 111.514 1.00 50.82 C
ATOM 16 O2 C B1086 49.092 105.698 112.353 1.00 52.87 O
ATOM 17 N3 C B1086 47.465 105.663 110.770 1.00 48.50 N
ATOM 18 C4 C B1086 46.792 104.958 109.858 1.00 46.98 C
ATOM 19 N4 C B1086 45.876 105.595 109.127 1.00 46.57 N
ATOM 20 C5 C B1086 47.032 103.572 109.649 1.00 46.47 C
ATOM 21 C6 C B1086 47.971 102.983 110.398 1.00 47.76 C
ATOM 22 P U B1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 23 OP1 U B1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 24 OP2 U B1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 25 O5' U B1087 47.104 102.362 116.222 1.00 49.70 O
TER
Atoms:
C4: (44.057,103.277,110.806)
N3: (43.807,104.558,111.233)
OP1: (48.607,101.104,117.731)
OP2: (47.327,99.884,115.882)
C2: (44.027,105.070,112.483)
C1': (44.811,104.674,114.760)
C3': (45.152,104.354,117.054)
O5': (47.104,102.362,116.222)
O4': (46.199,104.825,114.966)
C5': (47.577,103.665,116.581)
P: (48.046,101.089,116.359)
C4': (46.486,104.686,116.388)
C2': (44.340,103.781,115.900)
O2': (42.946,103.888,116.082)
N1: (44.568,104.175,113.398)
O4: (43.796,102.976,109.643)
O2: (43.761,106.228,112.757)
C6: (44.851,102.877,113.032)
C5: (44.615,102.408,111.802)
O3': (44.541,105.552,117.491)
N3: (43.807,104.558,111.233)
OP1: (48.607,101.104,117.731)
OP2: (47.327,99.884,115.882)
C2: (44.027,105.070,112.483)
C1': (44.811,104.674,114.760)
C3': (45.152,104.354,117.054)
O5': (47.104,102.362,116.222)
O4': (46.199,104.825,114.966)
C5': (47.577,103.665,116.581)
P: (48.046,101.089,116.359)
C4': (46.486,104.686,116.388)
C2': (44.340,103.781,115.900)
O2': (42.946,103.888,116.082)
N1: (44.568,104.175,113.398)
O4: (43.796,102.976,109.643)
O2: (43.761,106.228,112.757)
C6: (44.851,102.877,113.032)
C5: (44.615,102.408,111.802)
O3': (44.541,105.552,117.491)
C2: (48.426,105.064,111.514)
OP1: (46.597,99.832,110.026)
OP2: (47.276,97.685,111.255)
C4: (46.792,104.958,109.858)
O5': (47.561,99.944,112.301)
C3': (48.971,101.764,113.974)
C1': (49.743,103.038,112.126)
O4': (49.800,101.663,111.777)
C5': (48.915,99.607,112.630)
P: (46.711,99.063,111.286)
O2: (49.092,105.698,112.353)
C4': (49.670,100.856,112.973)
C2': (49.573,103.127,113.650)
O2': (50.835,103.333,114.259)
N1: (48.685,103.692,111.324)
N3: (47.465,105.663,110.770)
N4: (45.876,105.595,109.127)
C6: (47.971,102.983,110.398)
C5: (47.032,103.572,109.649)
O3': (49.251,101.371,115.323)
OP1: (46.597,99.832,110.026)
OP2: (47.276,97.685,111.255)
C4: (46.792,104.958,109.858)
O5': (47.561,99.944,112.301)
C3': (48.971,101.764,113.974)
C1': (49.743,103.038,112.126)
O4': (49.800,101.663,111.777)
C5': (48.915,99.607,112.630)
P: (46.711,99.063,111.286)
O2: (49.092,105.698,112.353)
C4': (49.670,100.856,112.973)
C2': (49.573,103.127,113.650)
O2': (50.835,103.333,114.259)
N1: (48.685,103.692,111.324)
N3: (47.465,105.663,110.770)
N4: (45.876,105.595,109.127)
C6: (47.971,102.983,110.398)
C5: (47.032,103.572,109.649)
O3': (49.251,101.371,115.323)
Image (generated by PyMOL):