Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 79.086 104.514 -0.108 1.00 61.87 O
ATOM 2 P U A 258 77.611 104.467 0.536 1.00 62.82 P
ATOM 3 OP1 U A 258 76.949 103.217 0.085 1.00 63.58 O
ATOM 4 OP2 U A 258 76.940 105.772 0.295 1.00 61.48 O
ATOM 5 O5' U A 258 77.914 104.319 2.091 1.00 63.70 O
ATOM 6 C5' U A 258 78.625 103.170 2.592 1.00 64.58 C
ATOM 7 C4' U A 258 78.864 103.307 4.078 1.00 66.06 C
ATOM 8 O4' U A 258 79.921 104.282 4.325 1.00 63.05 O
ATOM 9 C3' U A 258 77.658 103.770 4.898 1.00 67.04 C
ATOM 10 O3' U A 258 77.695 103.125 6.174 1.00 71.73 O
ATOM 11 C2' U A 258 77.934 105.267 5.045 1.00 63.63 C
ATOM 12 O2' U A 258 77.272 105.874 6.139 1.00 62.45 O
ATOM 13 C1' U A 258 79.448 105.239 5.241 1.00 60.35 C
ATOM 14 N1 U A 258 80.228 106.482 5.116 1.00 56.19 N
ATOM 15 C2 U A 258 81.555 106.437 5.512 1.00 54.43 C
ATOM 16 O2 U A 258 82.115 105.406 5.839 1.00 53.44 O
ATOM 17 N3 U A 258 82.205 107.646 5.508 1.00 53.15 N
ATOM 18 C4 U A 258 81.686 108.869 5.141 1.00 54.60 C
ATOM 19 O4 U A 258 82.385 109.881 5.246 1.00 54.76 O
ATOM 20 C5 U A 258 80.334 108.825 4.668 1.00 54.51 C
ATOM 21 C6 U A 258 79.668 107.663 4.673 1.00 56.16 C
ATOM 22 P C A 259 76.338 102.566 6.839 1.00 76.14 P
ATOM 23 OP1 C A 259 75.247 103.562 6.670 1.00 75.77 O
ATOM 24 OP2 C A 259 76.709 102.111 8.207 1.00 77.84 O
ATOM 25 O5' C A 259 75.968 101.275 5.982 1.00 78.70 O
TER
ATOM 1 O3' C B 227 77.029 113.200 4.508 1.00 53.94 O
ATOM 2 P C B 228 78.498 112.860 3.933 1.00 56.31 P
ATOM 3 OP1 C B 228 78.678 113.706 2.731 1.00 58.30 O
ATOM 4 OP2 C B 228 78.720 111.393 3.833 1.00 55.26 O
ATOM 5 O5' C B 228 79.478 113.405 5.060 1.00 54.89 O
ATOM 6 C5' C B 228 80.843 113.004 5.085 1.00 54.06 C
ATOM 7 C4' C B 228 81.408 113.189 6.463 1.00 54.89 C
ATOM 8 O4' C B 228 80.717 112.330 7.405 1.00 54.51 O
ATOM 9 C3' C B 228 82.861 112.783 6.594 1.00 55.31 C
ATOM 10 O3' C B 228 83.672 113.870 6.158 1.00 55.69 O
ATOM 11 C2' C B 228 82.993 112.533 8.093 1.00 54.68 C
ATOM 12 O2' C B 228 83.170 113.735 8.824 1.00 56.35 O
ATOM 13 C1' C B 228 81.615 111.943 8.435 1.00 52.63 C
ATOM 14 N1 C B 228 81.536 110.475 8.618 1.00 49.76 N
ATOM 15 C2 C B 228 82.528 109.808 9.379 1.00 49.73 C
ATOM 16 O2 C B 228 83.421 110.465 9.931 1.00 50.33 O
ATOM 17 N3 C B 228 82.473 108.463 9.496 1.00 48.50 N
ATOM 18 C4 C B 228 81.483 107.782 8.915 1.00 47.30 C
ATOM 19 N4 C B 228 81.491 106.458 9.031 1.00 46.90 N
ATOM 20 C5 C B 228 80.446 108.431 8.180 1.00 46.53 C
ATOM 21 C6 C B 228 80.513 109.761 8.054 1.00 48.21 C
ATOM 22 P A B 229 85.006 113.594 5.308 1.00 55.87 P
ATOM 23 OP1 A B 229 85.667 114.924 5.205 1.00 56.02 O
ATOM 24 OP2 A B 229 84.654 112.847 4.069 1.00 55.05 O
ATOM 25 O5' A B 229 85.881 112.637 6.233 1.00 51.78 O
TER
ATOM 2 P U A 258 77.611 104.467 0.536 1.00 62.82 P
ATOM 3 OP1 U A 258 76.949 103.217 0.085 1.00 63.58 O
ATOM 4 OP2 U A 258 76.940 105.772 0.295 1.00 61.48 O
ATOM 5 O5' U A 258 77.914 104.319 2.091 1.00 63.70 O
ATOM 6 C5' U A 258 78.625 103.170 2.592 1.00 64.58 C
ATOM 7 C4' U A 258 78.864 103.307 4.078 1.00 66.06 C
ATOM 8 O4' U A 258 79.921 104.282 4.325 1.00 63.05 O
ATOM 9 C3' U A 258 77.658 103.770 4.898 1.00 67.04 C
ATOM 10 O3' U A 258 77.695 103.125 6.174 1.00 71.73 O
ATOM 11 C2' U A 258 77.934 105.267 5.045 1.00 63.63 C
ATOM 12 O2' U A 258 77.272 105.874 6.139 1.00 62.45 O
ATOM 13 C1' U A 258 79.448 105.239 5.241 1.00 60.35 C
ATOM 14 N1 U A 258 80.228 106.482 5.116 1.00 56.19 N
ATOM 15 C2 U A 258 81.555 106.437 5.512 1.00 54.43 C
ATOM 16 O2 U A 258 82.115 105.406 5.839 1.00 53.44 O
ATOM 17 N3 U A 258 82.205 107.646 5.508 1.00 53.15 N
ATOM 18 C4 U A 258 81.686 108.869 5.141 1.00 54.60 C
ATOM 19 O4 U A 258 82.385 109.881 5.246 1.00 54.76 O
ATOM 20 C5 U A 258 80.334 108.825 4.668 1.00 54.51 C
ATOM 21 C6 U A 258 79.668 107.663 4.673 1.00 56.16 C
ATOM 22 P C A 259 76.338 102.566 6.839 1.00 76.14 P
ATOM 23 OP1 C A 259 75.247 103.562 6.670 1.00 75.77 O
ATOM 24 OP2 C A 259 76.709 102.111 8.207 1.00 77.84 O
ATOM 25 O5' C A 259 75.968 101.275 5.982 1.00 78.70 O
TER
ATOM 1 O3' C B 227 77.029 113.200 4.508 1.00 53.94 O
ATOM 2 P C B 228 78.498 112.860 3.933 1.00 56.31 P
ATOM 3 OP1 C B 228 78.678 113.706 2.731 1.00 58.30 O
ATOM 4 OP2 C B 228 78.720 111.393 3.833 1.00 55.26 O
ATOM 5 O5' C B 228 79.478 113.405 5.060 1.00 54.89 O
ATOM 6 C5' C B 228 80.843 113.004 5.085 1.00 54.06 C
ATOM 7 C4' C B 228 81.408 113.189 6.463 1.00 54.89 C
ATOM 8 O4' C B 228 80.717 112.330 7.405 1.00 54.51 O
ATOM 9 C3' C B 228 82.861 112.783 6.594 1.00 55.31 C
ATOM 10 O3' C B 228 83.672 113.870 6.158 1.00 55.69 O
ATOM 11 C2' C B 228 82.993 112.533 8.093 1.00 54.68 C
ATOM 12 O2' C B 228 83.170 113.735 8.824 1.00 56.35 O
ATOM 13 C1' C B 228 81.615 111.943 8.435 1.00 52.63 C
ATOM 14 N1 C B 228 81.536 110.475 8.618 1.00 49.76 N
ATOM 15 C2 C B 228 82.528 109.808 9.379 1.00 49.73 C
ATOM 16 O2 C B 228 83.421 110.465 9.931 1.00 50.33 O
ATOM 17 N3 C B 228 82.473 108.463 9.496 1.00 48.50 N
ATOM 18 C4 C B 228 81.483 107.782 8.915 1.00 47.30 C
ATOM 19 N4 C B 228 81.491 106.458 9.031 1.00 46.90 N
ATOM 20 C5 C B 228 80.446 108.431 8.180 1.00 46.53 C
ATOM 21 C6 C B 228 80.513 109.761 8.054 1.00 48.21 C
ATOM 22 P A B 229 85.006 113.594 5.308 1.00 55.87 P
ATOM 23 OP1 A B 229 85.667 114.924 5.205 1.00 56.02 O
ATOM 24 OP2 A B 229 84.654 112.847 4.069 1.00 55.05 O
ATOM 25 O5' A B 229 85.881 112.637 6.233 1.00 51.78 O
TER
Atoms:
C4: (81.686,108.869,5.141)
N3: (82.205,107.646,5.508)
OP1: (76.949,103.217,0.085)
OP2: (76.940,105.772,0.295)
C2: (81.555,106.437,5.512)
C1': (79.448,105.239,5.241)
C3': (77.658,103.770,4.898)
O5': (77.914,104.319,2.091)
O4': (79.921,104.282,4.325)
C5': (78.625,103.170,2.592)
P: (77.611,104.467,0.536)
C4': (78.864,103.307,4.078)
C2': (77.934,105.267,5.045)
O2': (77.272,105.874,6.139)
N1: (80.228,106.482,5.116)
O4: (82.385,109.881,5.246)
O2: (82.115,105.406,5.839)
C6: (79.668,107.663,4.673)
C5: (80.334,108.825,4.668)
O3': (77.695,103.125,6.174)
N3: (82.205,107.646,5.508)
OP1: (76.949,103.217,0.085)
OP2: (76.940,105.772,0.295)
C2: (81.555,106.437,5.512)
C1': (79.448,105.239,5.241)
C3': (77.658,103.770,4.898)
O5': (77.914,104.319,2.091)
O4': (79.921,104.282,4.325)
C5': (78.625,103.170,2.592)
P: (77.611,104.467,0.536)
C4': (78.864,103.307,4.078)
C2': (77.934,105.267,5.045)
O2': (77.272,105.874,6.139)
N1: (80.228,106.482,5.116)
O4: (82.385,109.881,5.246)
O2: (82.115,105.406,5.839)
C6: (79.668,107.663,4.673)
C5: (80.334,108.825,4.668)
O3': (77.695,103.125,6.174)
C2: (82.528,109.808,9.379)
OP1: (78.678,113.706,2.731)
OP2: (78.720,111.393,3.833)
C4: (81.483,107.782,8.915)
O5': (79.478,113.405,5.060)
C3': (82.861,112.783,6.594)
C1': (81.615,111.943,8.435)
O4': (80.717,112.330,7.405)
C5': (80.843,113.004,5.085)
P: (78.498,112.860,3.933)
O2: (83.421,110.465,9.931)
C4': (81.408,113.189,6.463)
C2': (82.993,112.533,8.093)
O2': (83.170,113.735,8.824)
N1: (81.536,110.475,8.618)
N3: (82.473,108.463,9.496)
N4: (81.491,106.458,9.031)
C6: (80.513,109.761,8.054)
C5: (80.446,108.431,8.180)
O3': (83.672,113.870,6.158)
OP1: (78.678,113.706,2.731)
OP2: (78.720,111.393,3.833)
C4: (81.483,107.782,8.915)
O5': (79.478,113.405,5.060)
C3': (82.861,112.783,6.594)
C1': (81.615,111.943,8.435)
O4': (80.717,112.330,7.405)
C5': (80.843,113.004,5.085)
P: (78.498,112.860,3.933)
O2: (83.421,110.465,9.931)
C4': (81.408,113.189,6.463)
C2': (82.993,112.533,8.093)
O2': (83.170,113.735,8.824)
N1: (81.536,110.475,8.618)
N3: (82.473,108.463,9.496)
N4: (81.491,106.458,9.031)
C6: (80.513,109.761,8.054)
C5: (80.446,108.431,8.180)
O3': (83.672,113.870,6.158)
Image (generated by PyMOL):