Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A42:A41
Extra
PDB:
ATOM 1 O3' G A 41 36.868 -56.045 -66.141 1.00 47.52 O
ATOM 2 P A A 42 36.248 -55.560 -67.545 1.00 39.20 P
ATOM 3 OP1 A A 42 35.849 -56.794 -68.290 1.00 39.90 O
ATOM 4 OP2 A A 42 37.214 -54.633 -68.163 1.00 46.69 O
ATOM 5 O5' A A 42 34.960 -54.752 -67.096 1.00 51.47 O
ATOM 6 C5' A A 42 35.039 -53.747 -66.104 1.00 39.66 C
ATOM 7 C4' A A 42 34.070 -52.633 -66.362 1.00 45.65 C
ATOM 8 O4' A A 42 34.139 -51.743 -65.225 1.00 41.27 O
ATOM 9 C3' A A 42 34.385 -51.797 -67.607 1.00 63.65 C
ATOM 10 O3' A A 42 33.265 -51.682 -68.576 1.00 67.00 O
ATOM 11 C2' A A 42 34.870 -50.441 -67.063 1.00 53.80 C
ATOM 12 O2' A A 42 34.448 -49.308 -67.789 1.00 69.95 O
ATOM 13 C1' A A 42 34.354 -50.410 -65.628 1.00 47.75 C
ATOM 14 N9 A A 42 35.311 -49.804 -64.698 1.00 46.85 N
ATOM 15 C8 A A 42 35.167 -48.709 -63.871 1.00 43.61 C
ATOM 16 N7 A A 42 36.258 -48.397 -63.206 1.00 39.24 N
ATOM 17 C5 A A 42 37.186 -49.336 -63.639 1.00 40.55 C
ATOM 18 C6 A A 42 38.529 -49.549 -63.305 1.00 41.04 C
ATOM 19 N6 A A 42 39.210 -48.796 -62.420 1.00 39.62 N
ATOM 20 N1 A A 42 39.154 -50.582 -63.921 1.00 40.68 N
ATOM 21 C2 A A 42 38.494 -51.337 -64.804 1.00 38.74 C
ATOM 22 N3 A A 42 37.230 -51.229 -65.191 1.00 45.67 N
ATOM 23 C4 A A 42 36.623 -50.204 -64.562 1.00 44.31 C
ATOM 24 P U A 43 31.707 -51.401 -68.189 1.00 53.63 P
ATOM 25 OP1 U A 43 31.187 -50.408 -69.153 1.00110.80 O
ATOM 26 OP2 U A 43 31.648 -51.081 -66.749 1.00108.30 O
ATOM 27 O5' U A 43 31.028 -52.794 -68.455 1.00 39.19 O
TER
ATOM 1 O3' C B 40 40.498 -61.018 -67.274 1.00 40.83 O
ATOM 2 P G B 41 39.617 -59.999 -68.118 1.00 26.77 P
ATOM 3 OP1 G B 41 38.297 -60.616 -68.285 1.00 40.66 O
ATOM 4 OP2 G B 41 40.403 -59.648 -69.337 1.00 40.46 O
ATOM 5 O5' G B 41 39.512 -58.746 -67.154 1.00 26.61 O
ATOM 6 C5' G B 41 38.564 -58.742 -66.114 1.00 39.53 C
ATOM 7 C4' G B 41 38.638 -57.493 -65.296 1.00 38.55 C
ATOM 8 O4' G B 41 39.997 -57.259 -64.869 1.00 37.41 O
ATOM 9 C3' G B 41 38.264 -56.207 -65.995 1.00 40.93 C
ATOM 10 O3' G B 41 36.868 -56.045 -66.141 1.00 47.52 O
ATOM 11 C2' G B 41 38.906 -55.171 -65.089 1.00 39.91 C
ATOM 12 O2' G B 41 38.162 -55.024 -63.875 1.00 29.60 O
ATOM 13 C1' G B 41 40.221 -55.868 -64.767 1.00 35.25 C
ATOM 14 N9 G B 41 41.265 -55.504 -65.723 1.00 32.62 N
ATOM 15 C8 G B 41 41.819 -56.336 -66.671 1.00 40.37 C
ATOM 16 N7 G B 41 42.755 -55.749 -67.376 1.00 39.14 N
ATOM 17 C5 G B 41 42.797 -54.467 -66.842 1.00 34.92 C
ATOM 18 C6 G B 41 43.605 -53.391 -67.220 1.00 39.14 C
ATOM 19 O6 G B 41 44.461 -53.360 -68.121 1.00 58.17 O
ATOM 20 N1 G B 41 43.329 -52.288 -66.437 1.00 27.35 N
ATOM 21 C2 G B 41 42.420 -52.230 -65.431 1.00 30.52 C
ATOM 22 N2 G B 41 42.334 -51.045 -64.824 1.00 36.78 N
ATOM 23 N3 G B 41 41.651 -53.226 -65.065 1.00 28.39 N
ATOM 24 C4 G B 41 41.895 -54.299 -65.819 1.00 30.90 C
ATOM 25 P A B 42 36.248 -55.560 -67.545 1.00 39.20 P
ATOM 26 OP1 A B 42 35.849 -56.794 -68.290 1.00 39.90 O
ATOM 27 OP2 A B 42 37.214 -54.633 -68.163 1.00 46.69 O
ATOM 28 O5' A B 42 34.960 -54.752 -67.096 1.00 51.47 O
TER
ATOM 2 P A A 42 36.248 -55.560 -67.545 1.00 39.20 P
ATOM 3 OP1 A A 42 35.849 -56.794 -68.290 1.00 39.90 O
ATOM 4 OP2 A A 42 37.214 -54.633 -68.163 1.00 46.69 O
ATOM 5 O5' A A 42 34.960 -54.752 -67.096 1.00 51.47 O
ATOM 6 C5' A A 42 35.039 -53.747 -66.104 1.00 39.66 C
ATOM 7 C4' A A 42 34.070 -52.633 -66.362 1.00 45.65 C
ATOM 8 O4' A A 42 34.139 -51.743 -65.225 1.00 41.27 O
ATOM 9 C3' A A 42 34.385 -51.797 -67.607 1.00 63.65 C
ATOM 10 O3' A A 42 33.265 -51.682 -68.576 1.00 67.00 O
ATOM 11 C2' A A 42 34.870 -50.441 -67.063 1.00 53.80 C
ATOM 12 O2' A A 42 34.448 -49.308 -67.789 1.00 69.95 O
ATOM 13 C1' A A 42 34.354 -50.410 -65.628 1.00 47.75 C
ATOM 14 N9 A A 42 35.311 -49.804 -64.698 1.00 46.85 N
ATOM 15 C8 A A 42 35.167 -48.709 -63.871 1.00 43.61 C
ATOM 16 N7 A A 42 36.258 -48.397 -63.206 1.00 39.24 N
ATOM 17 C5 A A 42 37.186 -49.336 -63.639 1.00 40.55 C
ATOM 18 C6 A A 42 38.529 -49.549 -63.305 1.00 41.04 C
ATOM 19 N6 A A 42 39.210 -48.796 -62.420 1.00 39.62 N
ATOM 20 N1 A A 42 39.154 -50.582 -63.921 1.00 40.68 N
ATOM 21 C2 A A 42 38.494 -51.337 -64.804 1.00 38.74 C
ATOM 22 N3 A A 42 37.230 -51.229 -65.191 1.00 45.67 N
ATOM 23 C4 A A 42 36.623 -50.204 -64.562 1.00 44.31 C
ATOM 24 P U A 43 31.707 -51.401 -68.189 1.00 53.63 P
ATOM 25 OP1 U A 43 31.187 -50.408 -69.153 1.00110.80 O
ATOM 26 OP2 U A 43 31.648 -51.081 -66.749 1.00108.30 O
ATOM 27 O5' U A 43 31.028 -52.794 -68.455 1.00 39.19 O
TER
ATOM 1 O3' C B 40 40.498 -61.018 -67.274 1.00 40.83 O
ATOM 2 P G B 41 39.617 -59.999 -68.118 1.00 26.77 P
ATOM 3 OP1 G B 41 38.297 -60.616 -68.285 1.00 40.66 O
ATOM 4 OP2 G B 41 40.403 -59.648 -69.337 1.00 40.46 O
ATOM 5 O5' G B 41 39.512 -58.746 -67.154 1.00 26.61 O
ATOM 6 C5' G B 41 38.564 -58.742 -66.114 1.00 39.53 C
ATOM 7 C4' G B 41 38.638 -57.493 -65.296 1.00 38.55 C
ATOM 8 O4' G B 41 39.997 -57.259 -64.869 1.00 37.41 O
ATOM 9 C3' G B 41 38.264 -56.207 -65.995 1.00 40.93 C
ATOM 10 O3' G B 41 36.868 -56.045 -66.141 1.00 47.52 O
ATOM 11 C2' G B 41 38.906 -55.171 -65.089 1.00 39.91 C
ATOM 12 O2' G B 41 38.162 -55.024 -63.875 1.00 29.60 O
ATOM 13 C1' G B 41 40.221 -55.868 -64.767 1.00 35.25 C
ATOM 14 N9 G B 41 41.265 -55.504 -65.723 1.00 32.62 N
ATOM 15 C8 G B 41 41.819 -56.336 -66.671 1.00 40.37 C
ATOM 16 N7 G B 41 42.755 -55.749 -67.376 1.00 39.14 N
ATOM 17 C5 G B 41 42.797 -54.467 -66.842 1.00 34.92 C
ATOM 18 C6 G B 41 43.605 -53.391 -67.220 1.00 39.14 C
ATOM 19 O6 G B 41 44.461 -53.360 -68.121 1.00 58.17 O
ATOM 20 N1 G B 41 43.329 -52.288 -66.437 1.00 27.35 N
ATOM 21 C2 G B 41 42.420 -52.230 -65.431 1.00 30.52 C
ATOM 22 N2 G B 41 42.334 -51.045 -64.824 1.00 36.78 N
ATOM 23 N3 G B 41 41.651 -53.226 -65.065 1.00 28.39 N
ATOM 24 C4 G B 41 41.895 -54.299 -65.819 1.00 30.90 C
ATOM 25 P A B 42 36.248 -55.560 -67.545 1.00 39.20 P
ATOM 26 OP1 A B 42 35.849 -56.794 -68.290 1.00 39.90 O
ATOM 27 OP2 A B 42 37.214 -54.633 -68.163 1.00 46.69 O
ATOM 28 O5' A B 42 34.960 -54.752 -67.096 1.00 51.47 O
TER
Atoms:
OP1: (35.849,-56.794,-68.290)
OP2: (37.214,-54.633,-68.163)
C3': (34.385,-51.797,-67.607)
C1': (34.354,-50.410,-65.628)
C5': (35.039,-53.747,-66.104)
O4': (34.139,-51.743,-65.225)
C8: (35.167,-48.709,-63.871)
O2': (34.448,-49.308,-67.789)
C6: (38.529,-49.549,-63.305)
C5: (37.186,-49.336,-63.639)
C4: (36.623,-50.204,-64.562)
P: (36.248,-55.560,-67.545)
C4': (34.070,-52.633,-66.362)
C2': (34.870,-50.441,-67.063)
C2: (38.494,-51.337,-64.804)
N1: (39.154,-50.582,-63.921)
N3: (37.230,-51.229,-65.191)
N6: (39.210,-48.796,-62.420)
N7: (36.258,-48.397,-63.206)
N9: (35.311,-49.804,-64.698)
O5': (34.960,-54.752,-67.096)
O3': (33.265,-51.682,-68.576)
OP2: (37.214,-54.633,-68.163)
C3': (34.385,-51.797,-67.607)
C1': (34.354,-50.410,-65.628)
C5': (35.039,-53.747,-66.104)
O4': (34.139,-51.743,-65.225)
C8: (35.167,-48.709,-63.871)
O2': (34.448,-49.308,-67.789)
C6: (38.529,-49.549,-63.305)
C5: (37.186,-49.336,-63.639)
C4: (36.623,-50.204,-64.562)
P: (36.248,-55.560,-67.545)
C4': (34.070,-52.633,-66.362)
C2': (34.870,-50.441,-67.063)
C2: (38.494,-51.337,-64.804)
N1: (39.154,-50.582,-63.921)
N3: (37.230,-51.229,-65.191)
N6: (39.210,-48.796,-62.420)
N7: (36.258,-48.397,-63.206)
N9: (35.311,-49.804,-64.698)
O5': (34.960,-54.752,-67.096)
O3': (33.265,-51.682,-68.576)
OP1: (38.297,-60.616,-68.285)
OP2: (40.403,-59.648,-69.337)
C3': (38.264,-56.207,-65.995)
C1': (40.221,-55.868,-64.767)
C5': (38.564,-58.742,-66.114)
O6: (44.461,-53.360,-68.121)
O4': (39.997,-57.259,-64.869)
C8: (41.819,-56.336,-66.671)
C2: (42.420,-52.230,-65.431)
C6: (43.605,-53.391,-67.220)
C5: (42.797,-54.467,-66.842)
C4: (41.895,-54.299,-65.819)
P: (39.617,-59.999,-68.118)
C4': (38.638,-57.493,-65.296)
C2': (38.906,-55.171,-65.089)
O2': (38.162,-55.024,-63.875)
N1: (43.329,-52.288,-66.437)
N2: (42.334,-51.045,-64.824)
N3: (41.651,-53.226,-65.065)
N7: (42.755,-55.749,-67.376)
N9: (41.265,-55.504,-65.723)
O5': (39.512,-58.746,-67.154)
O3': (36.868,-56.045,-66.141)
OP2: (40.403,-59.648,-69.337)
C3': (38.264,-56.207,-65.995)
C1': (40.221,-55.868,-64.767)
C5': (38.564,-58.742,-66.114)
O6: (44.461,-53.360,-68.121)
O4': (39.997,-57.259,-64.869)
C8: (41.819,-56.336,-66.671)
C2: (42.420,-52.230,-65.431)
C6: (43.605,-53.391,-67.220)
C5: (42.797,-54.467,-66.842)
C4: (41.895,-54.299,-65.819)
P: (39.617,-59.999,-68.118)
C4': (38.638,-57.493,-65.296)
C2': (38.906,-55.171,-65.089)
O2': (38.162,-55.024,-63.875)
N1: (43.329,-52.288,-66.437)
N2: (42.334,-51.045,-64.824)
N3: (41.651,-53.226,-65.065)
N7: (42.755,-55.749,-67.376)
N9: (41.265,-55.504,-65.723)
O5': (39.512,-58.746,-67.154)
O3': (36.868,-56.045,-66.141)
Image (generated by PyMOL):