Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 79.298 104.411 -0.057 1.00 68.78 O
ATOM 2 P U A 258 77.817 104.331 0.558 1.00 68.22 P
ATOM 3 OP1 U A 258 77.191 103.075 0.084 1.00 68.99 O
ATOM 4 OP2 U A 258 77.126 105.627 0.318 1.00 68.37 O
ATOM 5 O5' U A 258 78.101 104.178 2.114 1.00 69.17 O
ATOM 6 C5' U A 258 78.794 103.026 2.619 1.00 69.07 C
ATOM 7 C4' U A 258 79.028 103.164 4.104 1.00 69.70 C
ATOM 8 O4' U A 258 80.083 104.140 4.349 1.00 66.24 O
ATOM 9 C3' U A 258 77.820 103.624 4.922 1.00 70.71 C
ATOM 10 O3' U A 258 77.846 102.978 6.197 1.00 74.92 O
ATOM 11 C2' U A 258 78.100 105.117 5.089 1.00 67.58 C
ATOM 12 O2' U A 258 77.442 105.685 6.206 1.00 68.37 O
ATOM 13 C1' U A 258 79.617 105.088 5.279 1.00 64.71 C
ATOM 14 N1 U A 258 80.398 106.332 5.147 1.00 60.37 N
ATOM 15 C2 U A 258 81.736 106.278 5.512 1.00 58.00 C
ATOM 16 O2 U A 258 82.302 105.243 5.821 1.00 56.34 O
ATOM 17 N3 U A 258 82.385 107.484 5.509 1.00 56.83 N
ATOM 18 C4 U A 258 81.858 108.711 5.175 1.00 57.23 C
ATOM 19 O4 U A 258 82.562 109.720 5.289 1.00 57.39 O
ATOM 20 C5 U A 258 80.503 108.677 4.722 1.00 56.49 C
ATOM 21 C6 U A 258 79.835 107.518 4.721 1.00 58.95 C
ATOM 22 P C A 259 76.493 102.364 6.817 1.00 77.96 P
ATOM 23 OP1 C A 259 75.390 103.352 6.709 1.00 77.03 O
ATOM 24 OP2 C A 259 76.870 101.829 8.150 1.00 80.20 O
ATOM 25 O5' C A 259 76.146 101.120 5.882 1.00 82.21 O
TER
ATOM 1 O3' C B 227 77.234 113.121 4.625 1.00 60.77 O
ATOM 2 P C B 228 78.684 112.749 4.029 1.00 60.71 P
ATOM 3 OP1 C B 228 78.877 113.569 2.808 1.00 62.45 O
ATOM 4 OP2 C B 228 78.852 111.275 3.958 1.00 60.09 O
ATOM 5 O5' C B 228 79.691 113.287 5.133 1.00 59.53 O
ATOM 6 C5' C B 228 81.049 112.868 5.143 1.00 57.34 C
ATOM 7 C4' C B 228 81.622 113.045 6.516 1.00 58.00 C
ATOM 8 O4' C B 228 80.910 112.203 7.460 1.00 56.52 O
ATOM 9 C3' C B 228 83.071 112.625 6.654 1.00 58.59 C
ATOM 10 O3' C B 228 83.900 113.701 6.219 1.00 59.24 O
ATOM 11 C2' C B 228 83.190 112.366 8.155 1.00 57.90 C
ATOM 12 O2' C B 228 83.366 113.550 8.915 1.00 59.83 O
ATOM 13 C1' C B 228 81.804 111.789 8.484 1.00 56.11 C
ATOM 14 N1 C B 228 81.713 110.320 8.647 1.00 52.58 N
ATOM 15 C2 C B 228 82.696 109.640 9.400 1.00 52.39 C
ATOM 16 O2 C B 228 83.610 110.286 9.932 1.00 53.86 O
ATOM 17 N3 C B 228 82.619 108.295 9.524 1.00 50.97 N
ATOM 18 C4 C B 228 81.621 107.629 8.941 1.00 49.87 C
ATOM 19 N4 C B 228 81.603 106.305 9.064 1.00 48.23 N
ATOM 20 C5 C B 228 80.600 108.292 8.198 1.00 50.13 C
ATOM 21 C6 C B 228 80.684 109.621 8.077 1.00 51.46 C
ATOM 22 P A B 229 85.230 113.404 5.368 1.00 60.92 P
ATOM 23 OP1 A B 229 85.926 114.710 5.222 1.00 61.34 O
ATOM 24 OP2 A B 229 84.869 112.630 4.153 1.00 61.31 O
ATOM 25 O5' A B 229 86.108 112.471 6.315 1.00 57.97 O
TER
ATOM 2 P U A 258 77.817 104.331 0.558 1.00 68.22 P
ATOM 3 OP1 U A 258 77.191 103.075 0.084 1.00 68.99 O
ATOM 4 OP2 U A 258 77.126 105.627 0.318 1.00 68.37 O
ATOM 5 O5' U A 258 78.101 104.178 2.114 1.00 69.17 O
ATOM 6 C5' U A 258 78.794 103.026 2.619 1.00 69.07 C
ATOM 7 C4' U A 258 79.028 103.164 4.104 1.00 69.70 C
ATOM 8 O4' U A 258 80.083 104.140 4.349 1.00 66.24 O
ATOM 9 C3' U A 258 77.820 103.624 4.922 1.00 70.71 C
ATOM 10 O3' U A 258 77.846 102.978 6.197 1.00 74.92 O
ATOM 11 C2' U A 258 78.100 105.117 5.089 1.00 67.58 C
ATOM 12 O2' U A 258 77.442 105.685 6.206 1.00 68.37 O
ATOM 13 C1' U A 258 79.617 105.088 5.279 1.00 64.71 C
ATOM 14 N1 U A 258 80.398 106.332 5.147 1.00 60.37 N
ATOM 15 C2 U A 258 81.736 106.278 5.512 1.00 58.00 C
ATOM 16 O2 U A 258 82.302 105.243 5.821 1.00 56.34 O
ATOM 17 N3 U A 258 82.385 107.484 5.509 1.00 56.83 N
ATOM 18 C4 U A 258 81.858 108.711 5.175 1.00 57.23 C
ATOM 19 O4 U A 258 82.562 109.720 5.289 1.00 57.39 O
ATOM 20 C5 U A 258 80.503 108.677 4.722 1.00 56.49 C
ATOM 21 C6 U A 258 79.835 107.518 4.721 1.00 58.95 C
ATOM 22 P C A 259 76.493 102.364 6.817 1.00 77.96 P
ATOM 23 OP1 C A 259 75.390 103.352 6.709 1.00 77.03 O
ATOM 24 OP2 C A 259 76.870 101.829 8.150 1.00 80.20 O
ATOM 25 O5' C A 259 76.146 101.120 5.882 1.00 82.21 O
TER
ATOM 1 O3' C B 227 77.234 113.121 4.625 1.00 60.77 O
ATOM 2 P C B 228 78.684 112.749 4.029 1.00 60.71 P
ATOM 3 OP1 C B 228 78.877 113.569 2.808 1.00 62.45 O
ATOM 4 OP2 C B 228 78.852 111.275 3.958 1.00 60.09 O
ATOM 5 O5' C B 228 79.691 113.287 5.133 1.00 59.53 O
ATOM 6 C5' C B 228 81.049 112.868 5.143 1.00 57.34 C
ATOM 7 C4' C B 228 81.622 113.045 6.516 1.00 58.00 C
ATOM 8 O4' C B 228 80.910 112.203 7.460 1.00 56.52 O
ATOM 9 C3' C B 228 83.071 112.625 6.654 1.00 58.59 C
ATOM 10 O3' C B 228 83.900 113.701 6.219 1.00 59.24 O
ATOM 11 C2' C B 228 83.190 112.366 8.155 1.00 57.90 C
ATOM 12 O2' C B 228 83.366 113.550 8.915 1.00 59.83 O
ATOM 13 C1' C B 228 81.804 111.789 8.484 1.00 56.11 C
ATOM 14 N1 C B 228 81.713 110.320 8.647 1.00 52.58 N
ATOM 15 C2 C B 228 82.696 109.640 9.400 1.00 52.39 C
ATOM 16 O2 C B 228 83.610 110.286 9.932 1.00 53.86 O
ATOM 17 N3 C B 228 82.619 108.295 9.524 1.00 50.97 N
ATOM 18 C4 C B 228 81.621 107.629 8.941 1.00 49.87 C
ATOM 19 N4 C B 228 81.603 106.305 9.064 1.00 48.23 N
ATOM 20 C5 C B 228 80.600 108.292 8.198 1.00 50.13 C
ATOM 21 C6 C B 228 80.684 109.621 8.077 1.00 51.46 C
ATOM 22 P A B 229 85.230 113.404 5.368 1.00 60.92 P
ATOM 23 OP1 A B 229 85.926 114.710 5.222 1.00 61.34 O
ATOM 24 OP2 A B 229 84.869 112.630 4.153 1.00 61.31 O
ATOM 25 O5' A B 229 86.108 112.471 6.315 1.00 57.97 O
TER
Atoms:
C4: (81.858,108.711,5.175)
N3: (82.385,107.484,5.509)
OP1: (77.191,103.075,0.084)
OP2: (77.126,105.627,0.318)
C2: (81.736,106.278,5.512)
C1': (79.617,105.088,5.279)
C3': (77.820,103.624,4.922)
O5': (78.101,104.178,2.114)
O4': (80.083,104.140,4.349)
C5': (78.794,103.026,2.619)
P: (77.817,104.331,0.558)
C4': (79.028,103.164,4.104)
C2': (78.100,105.117,5.089)
O2': (77.442,105.685,6.206)
N1: (80.398,106.332,5.147)
O4: (82.562,109.720,5.289)
O2: (82.302,105.243,5.821)
C6: (79.835,107.518,4.721)
C5: (80.503,108.677,4.722)
O3': (77.846,102.978,6.197)
N3: (82.385,107.484,5.509)
OP1: (77.191,103.075,0.084)
OP2: (77.126,105.627,0.318)
C2: (81.736,106.278,5.512)
C1': (79.617,105.088,5.279)
C3': (77.820,103.624,4.922)
O5': (78.101,104.178,2.114)
O4': (80.083,104.140,4.349)
C5': (78.794,103.026,2.619)
P: (77.817,104.331,0.558)
C4': (79.028,103.164,4.104)
C2': (78.100,105.117,5.089)
O2': (77.442,105.685,6.206)
N1: (80.398,106.332,5.147)
O4: (82.562,109.720,5.289)
O2: (82.302,105.243,5.821)
C6: (79.835,107.518,4.721)
C5: (80.503,108.677,4.722)
O3': (77.846,102.978,6.197)
C2: (82.696,109.640,9.400)
OP1: (78.877,113.569,2.808)
OP2: (78.852,111.275,3.958)
C4: (81.621,107.629,8.941)
O5': (79.691,113.287,5.133)
C3': (83.071,112.625,6.654)
C1': (81.804,111.789,8.484)
O4': (80.910,112.203,7.460)
C5': (81.049,112.868,5.143)
P: (78.684,112.749,4.029)
O2: (83.610,110.286,9.932)
C4': (81.622,113.045,6.516)
C2': (83.190,112.366,8.155)
O2': (83.366,113.550,8.915)
N1: (81.713,110.320,8.647)
N3: (82.619,108.295,9.524)
N4: (81.603,106.305,9.064)
C6: (80.684,109.621,8.077)
C5: (80.600,108.292,8.198)
O3': (83.900,113.701,6.219)
OP1: (78.877,113.569,2.808)
OP2: (78.852,111.275,3.958)
C4: (81.621,107.629,8.941)
O5': (79.691,113.287,5.133)
C3': (83.071,112.625,6.654)
C1': (81.804,111.789,8.484)
O4': (80.910,112.203,7.460)
C5': (81.049,112.868,5.143)
P: (78.684,112.749,4.029)
O2: (83.610,110.286,9.932)
C4': (81.622,113.045,6.516)
C2': (83.190,112.366,8.155)
O2': (83.366,113.550,8.915)
N1: (81.713,110.320,8.647)
N3: (82.619,108.295,9.524)
N4: (81.603,106.305,9.064)
C6: (80.684,109.621,8.077)
C5: (80.600,108.292,8.198)
O3': (83.900,113.701,6.219)
Image (generated by PyMOL):